RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
THBS3-206ENST00000469769 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
THBS3-206ENST00000469769 DNAAF4Q8WXU2 420 aa13.19□□□□□ -0.3
THBS3-206ENST00000469769 ARFGEF2Q9Y6D5 1785 aa13.19□□□□□ -0.3
THBS3-206ENST00000469769 MAP3K15Q6ZN16 1313 aa13.18□□□□□ -0.3
THBS3-206ENST00000469769 BEND3Q5T5X7 828 aa13.18□□□□□ -0.3
THBS3-206ENST00000469769 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
THBS3-206ENST00000469769 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
THBS3-206ENST00000469769 CRBNQ96SW2 442 aa13.18□□□□□ -0.3
THBS3-206ENST00000469769 METTL22Q9BUU2 404 aaPredicted RBP13.18□□□□□ -0.3
THBS3-206ENST00000469769 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
THBS3-206ENST00000469769 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
THBS3-206ENST00000469769 NEFLP07196 543 aa13.17□□□□□ -0.3
THBS3-206ENST00000469769 ADRA2BP18089 450 aa13.17□□□□□ -0.3
THBS3-206ENST00000469769 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
THBS3-206ENST00000469769 TRIM28Q13263 835 aaKnown RBP13.17□□□□□ -0.3
THBS3-206ENST00000469769 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
THBS3-206ENST00000469769 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
THBS3-206ENST00000469769 NUP98P52948 1817 aa13.17□□□□□ -0.3
THBS3-206ENST00000469769 COL15A1P39059 1388 aa13.17□□□□□ -0.3
THBS3-206ENST00000469769 A0A087WZG4 1122 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 ALDH1L1O75891 902 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 BAG6P46379 1132 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
THBS3-206ENST00000469769 RIC3Q7Z5B4 369 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 LINS1Q8NG48 757 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
THBS3-206ENST00000469769 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
THBS3-206ENST00000469769 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 SSFA2P28290 1259 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 EN1Q05925 392 aaPredicted RBP13.15□□□□□ -0.3
THBS3-206ENST00000469769 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 FKBP8Q14318 412 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
THBS3-206ENST00000469769 CLEC4GQ6UXB4 293 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 DZIP3Q86Y13 1208 aaKnown RBP13.15□□□□□ -0.3
THBS3-206ENST00000469769 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 ISCA1Q9BUE6 129 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 ZBTB40Q9NUA8 1239 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 QSER1Q2KHR3 1735 aa13.15□□□□□ -0.3
THBS3-206ENST00000469769 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.31
THBS3-206ENST00000469769 UTYO14607 1347 aa13.14□□□□□ -0.31
THBS3-206ENST00000469769 C4AP0C0L4 1744 aa13.14□□□□□ -0.31
THBS3-206ENST00000469769 GNPATO15228 680 aa13.14□□□□□ -0.31
THBS3-206ENST00000469769 IRX6P78412 446 aaPredicted RBP13.14□□□□□ -0.31
THBS3-206ENST00000469769 SF3B2Q13435 895 aaKnown RBP13.14□□□□□ -0.31
THBS3-206ENST00000469769 KIF6Q6ZMV9 814 aa13.14□□□□□ -0.31
THBS3-206ENST00000469769 SRCIN1Q9C0H9 1055 aa13.14□□□□□ -0.31
THBS3-206ENST00000469769 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
THBS3-206ENST00000469769 CHMP4BQ9H444 224 aaKnown RBP13.14□□□□□ -0.31
THBS3-206ENST00000469769 NARFQ9UHQ1 456 aa13.14□□□□□ -0.31
THBS3-206ENST00000469769 SCN7AQ01118 1682 aa13.14□□□□□ -0.31
THBS3-206ENST00000469769 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 HLFQ16534 295 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 SLC4A10Q6U841 1118 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 DEFB132Q7Z7B7 95 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
THBS3-206ENST00000469769 AK7Q96M32 723 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
THBS3-206ENST00000469769 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
THBS3-206ENST00000469769 ZNF827Q17R98 1081 aa13.12□□□□□ -0.31
THBS3-206ENST00000469769 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
THBS3-206ENST00000469769 NPM2Q86SE8 214 aaKnown RBP13.12□□□□□ -0.31
THBS3-206ENST00000469769 ZNF34Q8IZ26 560 aa13.12□□□□□ -0.31
THBS3-206ENST00000469769 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
THBS3-206ENST00000469769 ZBTB3Q9H5J0 574 aa13.12□□□□□ -0.31
THBS3-206ENST00000469769 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
THBS3-206ENST00000469769 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
THBS3-206ENST00000469769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.11□□□□□ -0.31
THBS3-206ENST00000469769 GCKRQ14397 625 aa13.11□□□□□ -0.31
THBS3-206ENST00000469769 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
THBS3-206ENST00000469769 MYD88Q99836 296 aa13.11□□□□□ -0.31
THBS3-206ENST00000469769 GTF3C3Q9Y5Q9 886 aa13.11□□□□□ -0.31
THBS3-206ENST00000469769 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
THBS3-206ENST00000469769 CASP7P55210 303 aa13.1□□□□□ -0.31
THBS3-206ENST00000469769 CWF19L2Q2TBE0 894 aaKnown RBP13.1□□□□□ -0.31
THBS3-206ENST00000469769 MEIS3Q99687 375 aa13.1□□□□□ -0.31
THBS3-206ENST00000469769 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
THBS3-206ENST00000469769 H7C1W4 665 aa13.09□□□□□ -0.31
THBS3-206ENST00000469769 GRM8O00222 908 aa13.09□□□□□ -0.31
THBS3-206ENST00000469769 GNAI3P08754 354 aa13.09□□□□□ -0.31
THBS3-206ENST00000469769 SLC15A2Q16348 729 aa13.09□□□□□ -0.31
THBS3-206ENST00000469769 NLRP10Q86W26 655 aa13.09□□□□□ -0.31
THBS3-206ENST00000469769 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
THBS3-206ENST00000469769 ZNF330Q9Y3S2 320 aaPredicted RBP13.09□□□□□ -0.31
THBS3-206ENST00000469769 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.32
THBS3-206ENST00000469769 ATP5J2-PTCD1G3V325 749 aa13.08□□□□□ -0.32
THBS3-206ENST00000469769 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.32
THBS3-206ENST00000469769 RFC4P35249 363 aa13.08□□□□□ -0.32
THBS3-206ENST00000469769 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
THBS3-206ENST00000469769 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
THBS3-206ENST00000469769 PPP4R2Q9NY27 417 aa13.08□□□□□ -0.32
THBS3-206ENST00000469769 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.32
THBS3-206ENST00000469769 UBN2Q6ZU65 1347 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms