RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 HMMRO75330 724 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 KRT222Q8N1A0 295 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 FOXO3O43524 673 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 CEP135Q66GS9 1140 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 THEMISQ8N1K5 641 aaPredicted RBP9.45□□□□□ -0.9
TPM3-215ENST00000469717 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 DNAJC5Q9H3Z4 198 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 ZNF75DP51815 510 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 NUP62CLQ9H1M0 184 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 CLIP2Q9UDT6 1046 aa9.45□□□□□ -0.9
TPM3-215ENST00000469717 YTHDC2Q9H6S0 1430 aaKnown RBP9.44□□□□□ -0.9
TPM3-215ENST00000469717 MAP3K11Q16584 847 aa9.44□□□□□ -0.9
TPM3-215ENST00000469717 SECISBP2LQ93073 1101 aaKnown RBP9.44□□□□□ -0.9
TPM3-215ENST00000469717 KIAA0232Q92628 1395 aa9.44□□□□□ -0.9
TPM3-215ENST00000469717 PIP4K2BP78356 416 aa9.44□□□□□ -0.9
TPM3-215ENST00000469717 SULT6B1Q6IMI4 303 aa9.44□□□□□ -0.9
TPM3-215ENST00000469717 LIMCH1Q9UPQ0 1083 aa9.44□□□□□ -0.9
TPM3-215ENST00000469717 USP16Q9Y5T5 823 aa9.44□□□□□ -0.9
TPM3-215ENST00000469717 RAD50Q92878 1312 aa9.44□□□□□ -0.9
TPM3-215ENST00000469717 FILIP1Q7Z7B0 1213 aa9.44□□□□□ -0.9
TPM3-215ENST00000469717 ERCC4Q92889 916 aaPredicted RBP9.44□□□□□ -0.9
TPM3-215ENST00000469717 LRRFIP2Q9Y608 721 aaKnown RBP9.44□□□□□ -0.9
TPM3-215ENST00000469717 TAF3Q5VWG9 929 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 TRIM34Q9BYJ4 488 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 TNMDQ9H2S6 317 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 NEURL4Q96JN8 1562 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 NR1I2O75469 434 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 PTH1RQ03431 593 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 TIGD1Q96MW7 591 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 SLC52A1Q9NWF4 448 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 GNAI2P04899 355 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 PSME1Q06323 249 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 ME3Q16798 604 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 KIF24Q5T7B8 1368 aa9.43□□□□□ -0.9
TPM3-215ENST00000469717 PLA2G4DQ86XP0 818 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 JAKMIP1Q96N16 626 aaKnown RBP9.42□□□□□ -0.9
TPM3-215ENST00000469717 PUS7Q96PZ0 661 aaKnown RBP9.42□□□□□ -0.9
TPM3-215ENST00000469717 HYPKQ9NX55 129 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 ZNF165P49910 485 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 HNRNPH2P55795 449 aaKnown RBP9.42□□□□□ -0.9
TPM3-215ENST00000469717 ERCC6LQ2NKX8 1250 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
TPM3-215ENST00000469717 LSG1Q9H089 658 aaKnown RBP9.42□□□□□ -0.9
TPM3-215ENST00000469717 CHL1O00533 1208 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 SGSM2O43147 1006 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 TPM3P06753 285 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 PRPF40BQ6NWY9 871 aaKnown RBP9.42□□□□□ -0.9
TPM3-215ENST00000469717 TAOK2Q9UL54 1235 aa9.42□□□□□ -0.9
TPM3-215ENST00000469717 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.42□□□□□ -0.9
TPM3-215ENST00000469717 CHRM1P11229 460 aaPredicted RBP9.41□□□□□ -0.9
TPM3-215ENST00000469717 AMPHP49418 695 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 CEBPZQ03701 1054 aaKnown RBP9.41□□□□□ -0.9
TPM3-215ENST00000469717 NEK11Q8NG66 645 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 DDX11Q96FC9 970 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 ANKRD26Q9UPS8 1709 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 STK3Q13188 491 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 C11orf57Q6ZUT1 292 aaPredicted RBP9.41□□□□□ -0.9
TPM3-215ENST00000469717 TAF6LQ9Y6J9 622 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 UHRF1BP1LA0JNW5 1464 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 TUBGCP6Q96RT7 1819 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 ZFYVE9O95405 1425 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 POLR3GO15318 223 aaPredicted RBP9.41□□□□□ -0.9
TPM3-215ENST00000469717 LARP1BQ659C4 914 aaKnown RBP9.41□□□□□ -0.9
TPM3-215ENST00000469717 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
TPM3-215ENST00000469717 CCDC66A2RUB6 948 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 SKILP12757 684 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 ATF3P18847 181 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 FOSBP53539 338 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 LMOD3Q0VAK6 560 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 PTPN14Q15678 1187 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 LRRC8AQ8IWT6 810 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 GORABQ5T7V8 394 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 TPCN1Q9ULQ1 816 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 ZNF330Q9Y3S2 320 aaPredicted RBP9.4□□□□□ -0.9
TPM3-215ENST00000469717 ATP6V1DQ9Y5K8 247 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 PTPRCP08575 1304 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 PTPRMP28827 1452 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 IFIT2P09913 472 aaKnown RBP9.4□□□□□ -0.9
TPM3-215ENST00000469717 SYCP1Q15431 976 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 PI4K2BQ8TCG2 481 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 PGBD1Q96JS3 809 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 EPC1Q9H2F5 836 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 PDRG1Q9NUG6 133 aa9.4□□□□□ -0.9
TPM3-215ENST00000469717 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.917e-6■■□□□ 12.9
TPM3-215ENST00000469717 TMX1Q9H3N1 280 aa9.4□□□□□ -0.91
TPM3-215ENST00000469717 ZCCHC17Q9NP64 241 aaKnown RBP9.4□□□□□ -0.91
TPM3-215ENST00000469717 GOLGA6L4A6NEF3 574 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
TPM3-215ENST00000469717 BICD2Q8TD16 824 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 KRT85P78386 507 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 LARP1Q6PKG0 1096 aaKnown RBP9.39□□□□□ -0.91
TPM3-215ENST00000469717 NOL10Q9BSC4 688 aaKnown RBP9.39□□□□□ -0.91
TPM3-215ENST00000469717 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 CCDC69A6NI79 296 aa9.39□□□□□ -0.91
TPM3-215ENST00000469717 ATP8B2P98198 1209 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms