RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 PDE6BP35913 854 aa25.15■■□□□ 1.62
TRAK1-207ENST00000469506 SETDB2Q96T68 719 aa25.15■■□□□ 1.62
TRAK1-207ENST00000469506 SNRPA1P09661 255 aaKnown RBP25.13■■□□□ 1.61
TRAK1-207ENST00000469506 CNBD1Q8NA66 436 aa25.13■■□□□ 1.61
TRAK1-207ENST00000469506 MIS18AQ9NYP9 233 aa25.13■■□□□ 1.61
TRAK1-207ENST00000469506 RTF1Q92541 710 aaKnown RBP25.12■■□□□ 1.61
TRAK1-207ENST00000469506 KDM3BQ7LBC6 1761 aa25.11■■□□□ 1.61
TRAK1-207ENST00000469506 SRGNP10124 158 aa25.11■■□□□ 1.61
TRAK1-207ENST00000469506 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
TRAK1-207ENST00000469506 HTATSF1O43719 755 aaKnown RBP25.1■■□□□ 1.61
TRAK1-207ENST00000469506 LAMB4A4D0S4 1761 aa25.1■■□□□ 1.61
TRAK1-207ENST00000469506 VEGFAP15692 232 aaPredicted RBP25.09■■□□□ 1.61
TRAK1-207ENST00000469506 PCNTO95613 3336 aa25.08■■□□□ 1.61
TRAK1-207ENST00000469506 TAF7Q15545 349 aaPredicted RBP25.08■■□□□ 1.61
TRAK1-207ENST00000469506 STYK1Q6J9G0 422 aa25.08■■□□□ 1.61
TRAK1-207ENST00000469506 PRPF40BQ6NWY9 871 aaKnown RBP25.08■■□□□ 1.61
TRAK1-207ENST00000469506 NPM2Q86SE8 214 aaKnown RBP25.08■■□□□ 1.61
TRAK1-207ENST00000469506 SMC1BQ8NDV3 1235 aa25.08■■□□□ 1.61
TRAK1-207ENST00000469506 KLRG1Q96E93 195 aa25.08■■□□□ 1.61
TRAK1-207ENST00000469506 NUP98P52948 1817 aa25.07■■□□□ 1.6
TRAK1-207ENST00000469506 ST5P78524 1137 aa25.07■■□□□ 1.6
TRAK1-207ENST00000469506 HLFQ16534 295 aa25.07■■□□□ 1.6
TRAK1-207ENST00000469506 CLEC4GQ6UXB4 293 aa25.07■■□□□ 1.6
TRAK1-207ENST00000469506 C7orf43Q8WVR3 580 aa25.06■■□□□ 1.6
TRAK1-207ENST00000469506 MASTLQ96GX5 879 aa25.06■■□□□ 1.6
TRAK1-207ENST00000469506 PLEKHF1Q96S99 279 aa25.06■■□□□ 1.6
TRAK1-207ENST00000469506 ERFEQ4G0M1 354 aa25.05■■□□□ 1.6
TRAK1-207ENST00000469506 NBPF5PQ86XG9 351 aaPredicted RBP25.05■■□□□ 1.6
TRAK1-207ENST00000469506 CNKSR1Q969H4 720 aa25.05■■□□□ 1.6
TRAK1-207ENST00000469506 LTBP3Q9NS15 1303 aa25.05■■□□□ 1.6
TRAK1-207ENST00000469506 NPHP1O15259 732 aa25.04■■□□□ 1.6
TRAK1-207ENST00000469506 JMYQ8N9B5 988 aa25.04■■□□□ 1.6
TRAK1-207ENST00000469506 THUMPD2Q9BTF0 503 aaKnown RBP25.04■■□□□ 1.6
TRAK1-207ENST00000469506 KLRG2A4D1S0 409 aaPredicted RBP25.03■■□□□ 1.6
TRAK1-207ENST00000469506 FAM177BA6PVY3 158 aa25.03■■□□□ 1.6
TRAK1-207ENST00000469506 OLFM4Q6UX06 510 aa25.03■■□□□ 1.6
TRAK1-207ENST00000469506 TAOK3Q9H2K8 898 aa25.03■■□□□ 1.6
TRAK1-207ENST00000469506 NIP7Q9Y221 180 aaKnown RBP eCLIP25.03■■□□□ 1.6
TRAK1-207ENST00000469506 ZNF652Q9Y2D9 606 aa25.01■■□□□ 1.59
TRAK1-207ENST00000469506 DDNO94850 711 aaPredicted RBP25■■□□□ 1.59
TRAK1-207ENST00000469506 DPY19L2Q6NUT2 758 aa25■■□□□ 1.59
TRAK1-207ENST00000469506 EIF4A1P60842 406 aaKnown RBP24.99■■□□□ 1.59
TRAK1-207ENST00000469506 RGL2O15211 777 aa24.98■■□□□ 1.59
TRAK1-207ENST00000469506 POTEIP0CG38 1075 aa24.98■■□□□ 1.59
TRAK1-207ENST00000469506 POTEJP0CG39 1038 aa24.98■■□□□ 1.59
TRAK1-207ENST00000469506 NPR1P16066 1061 aa24.98■■□□□ 1.59
TRAK1-207ENST00000469506 TPTE2Q6XPS3 522 aa24.98■■□□□ 1.59
TRAK1-207ENST00000469506 NGEFQ8N5V2 710 aa24.98■■□□□ 1.59
TRAK1-207ENST00000469506 NFE2L2Q16236 605 aa24.97■■□□□ 1.59
TRAK1-207ENST00000469506 TTLL7Q6ZT98 887 aa24.97■■□□□ 1.59
TRAK1-207ENST00000469506 ABCC12Q96J65 1359 aa24.95■■□□□ 1.59
TRAK1-207ENST00000469506 RRP7AQ9Y3A4 280 aaKnown RBP24.95■■□□□ 1.58
TRAK1-207ENST00000469506 CCDC93Q567U6 631 aa24.94■■□□□ 1.58
TRAK1-207ENST00000469506 SOGA3Q5TF21 947 aa24.94■■□□□ 1.58
TRAK1-207ENST00000469506 SLC51AQ86UW1 340 aa24.93■■□□□ 1.58
TRAK1-207ENST00000469506 NUTM1Q86Y26 1132 aa24.93■■□□□ 1.58
TRAK1-207ENST00000469506 PNISRQ8TF01 805 aaKnown RBP24.93■■□□□ 1.58
TRAK1-207ENST00000469506 ZNF277Q9NRM2 450 aaPredicted RBP24.93■■□□□ 1.58
TRAK1-207ENST00000469506 SNED1Q8TER0 1413 aa24.93■■□□□ 1.58
TRAK1-207ENST00000469506 SCN4AP35499 1836 aa24.93■■□□□ 1.58
TRAK1-207ENST00000469506 FKBP4Q02790 459 aaKnown RBP eCLIP24.92■■□□□ 1.58
TRAK1-207ENST00000469506 COL13A1Q5TAT6 717 aaPredicted RBP24.92■■□□□ 1.58
TRAK1-207ENST00000469506 MAP3K15Q6ZN16 1313 aa24.91■■□□□ 1.58
TRAK1-207ENST00000469506 UBN2Q6ZU65 1347 aa24.91■■□□□ 1.58
TRAK1-207ENST00000469506 ZNF541Q9H0D2 1346 aa24.91■■□□□ 1.58
TRAK1-207ENST00000469506 ERVV-1B6SEH8 477 aa24.91■■□□□ 1.58
TRAK1-207ENST00000469506 MYL6BP14649 208 aa24.91■■□□□ 1.58
TRAK1-207ENST00000469506 COL4A5P29400 1685 aa24.89■■□□□ 1.58
TRAK1-207ENST00000469506 GPTP24298 496 aa24.89■■□□□ 1.58
TRAK1-207ENST00000469506 CRY2Q49AN0 593 aa24.89■■□□□ 1.58
TRAK1-207ENST00000469506 SUSD4Q5VX71 490 aa24.89■■□□□ 1.58
TRAK1-207ENST00000469506 CHADLQ6NUI6 762 aa24.89■■□□□ 1.58
TRAK1-207ENST00000469506 ZBTB3Q9H5J0 574 aa24.89■■□□□ 1.58
TRAK1-207ENST00000469506 NEFMP07197 916 aa24.88■■□□□ 1.57
TRAK1-207ENST00000469506 LRP10Q7Z4F1 713 aa24.88■■□□□ 1.57
TRAK1-207ENST00000469506 L3MBTL3Q96JM7 780 aaPredicted RBP24.88■■□□□ 1.57
TRAK1-207ENST00000469506 GTF2E1P29083 439 aaPredicted RBP24.87■■□□□ 1.57
TRAK1-207ENST00000469506 SYNE4Q8N205 404 aa24.87■■□□□ 1.57
TRAK1-207ENST00000469506 ADAMTSL1Q8N6G6 1762 aa24.86■■□□□ 1.57
TRAK1-207ENST00000469506 PDIA6Q15084 440 aa24.86■■□□□ 1.57
TRAK1-207ENST00000469506 C3orf67Q6ZVT6 689 aa24.86■■□□□ 1.57
TRAK1-207ENST00000469506 ZNF34Q8IZ26 560 aa24.86■■□□□ 1.57
TRAK1-207ENST00000469506 RTKN2Q8IZC4 609 aa24.86■■□□□ 1.57
TRAK1-207ENST00000469506 TAF1DQ9H5J8 278 aaPredicted RBP24.86■■□□□ 1.57
TRAK1-207ENST00000469506 ALDH1B1P30837 517 aa24.85■■□□□ 1.57
TRAK1-207ENST00000469506 MAPK8IP3Q9UPT6 1336 aa24.85■■□□□ 1.57
TRAK1-207ENST00000469506 PROSER3Q2NL68 480 aa24.84■■□□□ 1.57
TRAK1-207ENST00000469506 KIF6Q6ZMV9 814 aa24.84■■□□□ 1.57
TRAK1-207ENST00000469506 NYXQ9GZU5 481 aa24.84■■□□□ 1.57
TRAK1-207ENST00000469506 FZD9O00144 591 aa24.83■■□□□ 1.57
TRAK1-207ENST00000469506 NTSR2O95665 410 aa24.83■■□□□ 1.57
TRAK1-207ENST00000469506 ANXA1P04083 346 aa24.83■■□□□ 1.57
TRAK1-207ENST00000469506 IARSP41252 1262 aaKnown RBP24.83■■□□□ 1.57
TRAK1-207ENST00000469506 RIPK4P57078 832 aa24.83■■□□□ 1.57
TRAK1-207ENST00000469506 TSPYL4Q9UJ04 414 aa24.83■■□□□ 1.57
TRAK1-207ENST00000469506 HOXA10P31260 410 aaPredicted RBP24.82■■□□□ 1.56
TRAK1-207ENST00000469506 RIC1Q4ADV7 1423 aa24.82■■□□□ 1.56
TRAK1-207ENST00000469506 GIGYF2Q6Y7W6 1299 aaKnown RBP24.82■■□□□ 1.56
TRAK1-207ENST00000469506 LAMB2P55268 1798 aa24.82■■□□□ 1.56
TRAK1-207ENST00000469506 PASKQ96RG2 1323 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms