RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 FSTL1Q12841 308 aa14.5□□□□□ -0.09
COL4A3-204ENST00000469504 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
COL4A3-204ENST00000469504 STYK1Q6J9G0 422 aa14.5□□□□□ -0.09
COL4A3-204ENST00000469504 BCORQ6W2J9 1755 aa14.5□□□□□ -0.09
COL4A3-204ENST00000469504 CEP350Q5VT06 3117 aa14.49□□□□□ -0.09
COL4A3-204ENST00000469504 ZNF622Q969S3 477 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL4A3-204ENST00000469504 NMRK2Q9NPI5 230 aa14.49□□□□□ -0.09
COL4A3-204ENST00000469504 LTBP3Q9NS15 1303 aa14.48□□□□□ -0.09
COL4A3-204ENST00000469504 TPTE2Q6XPS3 522 aa14.48□□□□□ -0.09
COL4A3-204ENST00000469504 NBPF5PQ86XG9 351 aaPredicted RBP14.48□□□□□ -0.09
COL4A3-204ENST00000469504 MASTLQ96GX5 879 aa14.48□□□□□ -0.09
COL4A3-204ENST00000469504 BABAM1Q9NWV8 329 aa14.48□□□□□ -0.09
COL4A3-204ENST00000469504 ERBB4Q15303 1308 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 PRAMEF22A3QJZ6 481 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 GLTPD2A6NH11 291 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 NBPF26B4DH59 902 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 ERVV-1B6SEH8 477 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 SRGNP10124 158 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 RASSF7Q02833 373 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 LMOD3Q0VAK6 560 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 NBPF10Q6P3W6 841 aaKnown RBP14.47□□□□□ -0.09
COL4A3-204ENST00000469504 NBPF15Q8N660 670 aa14.47□□□□□ -0.09
COL4A3-204ENST00000469504 U3KPZ7 1027 aaPredicted RBP14.47□□□□□ -0.09
COL4A3-204ENST00000469504 TNRC6CQ9HCJ0 1690 aaKnown RBP14.46□□□□□ -0.09
COL4A3-204ENST00000469504 KLRG2A4D1S0 409 aaPredicted RBP14.46□□□□□ -0.09
COL4A3-204ENST00000469504 NFKBIEO00221 500 aa14.46□□□□□ -0.09
COL4A3-204ENST00000469504 EIF4A1P60842 406 aaKnown RBP14.46□□□□□ -0.09
COL4A3-204ENST00000469504 DPY19L2Q6NUT2 758 aa14.46□□□□□ -0.09
COL4A3-204ENST00000469504 NIP7Q9Y221 180 aaKnown RBP eCLIP14.46□□□□□ -0.09
COL4A3-204ENST00000469504 SBF1O95248 1867 aa14.46□□□□□ -0.1
COL4A3-204ENST00000469504 LAMB4A4D0S4 1761 aa14.45□□□□□ -0.1
COL4A3-204ENST00000469504 NPR1P16066 1061 aa14.45□□□□□ -0.1
COL4A3-204ENST00000469504 PIP4K2AP48426 406 aaPredicted RBP14.45□□□□□ -0.1
COL4A3-204ENST00000469504 ANKRD31Q8N7Z5 1873 aa14.45□□□□□ -0.1
COL4A3-204ENST00000469504 NYXQ9GZU5 481 aa14.45□□□□□ -0.1
COL4A3-204ENST00000469504 TAOK3Q9H2K8 898 aa14.45□□□□□ -0.1
COL4A3-204ENST00000469504 C21orf2O43822 256 aa14.44□□□□□ -0.1
COL4A3-204ENST00000469504 VEGFAP15692 232 aaPredicted RBP14.44□□□□□ -0.1
COL4A3-204ENST00000469504 PRPF40BQ6NWY9 871 aaKnown RBP14.44□□□□□ -0.1
COL4A3-204ENST00000469504 SMC1BQ8NDV3 1235 aa14.44□□□□□ -0.1
COL4A3-204ENST00000469504 RRAGCQ9HB90 399 aa14.44□□□□□ -0.1
COL4A3-204ENST00000469504 MIS18AQ9NYP9 233 aa14.44□□□□□ -0.1
COL4A3-204ENST00000469504 KDM3BQ7LBC6 1761 aa14.44□□□□□ -0.1
COL4A3-204ENST00000469504 IBTKQ9P2D0 1353 aaPredicted RBP14.44□□□□□ -0.1
COL4A3-204ENST00000469504 MYBBP1AQ9BQG0 1328 aaKnown RBP14.43□□□□□ -0.1
COL4A3-204ENST00000469504 KIF6Q6ZMV9 814 aa14.43□□□□□ -0.1
COL4A3-204ENST00000469504 MAP3K15Q6ZN16 1313 aa14.42□□□□□ -0.1
COL4A3-204ENST00000469504 COL11A2P13942 1736 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-204ENST00000469504 GTF2E1P29083 439 aaPredicted RBP14.42□□□□□ -0.1
COL4A3-204ENST00000469504 ALDH1B1P30837 517 aa14.42□□□□□ -0.1
COL4A3-204ENST00000469504 PRELPP51888 382 aa14.42□□□□□ -0.1
COL4A3-204ENST00000469504 ERFEQ4G0M1 354 aa14.42□□□□□ -0.1
COL4A3-204ENST00000469504 CCDC93Q567U6 631 aa14.42□□□□□ -0.1
COL4A3-204ENST00000469504 CCDC24Q8N4L8 307 aa14.42□□□□□ -0.1
COL4A3-204ENST00000469504 TSPYL4Q9UJ04 414 aa14.42□□□□□ -0.1
COL4A3-204ENST00000469504 RIPK4P57078 832 aa14.41□□□□□ -0.1
COL4A3-204ENST00000469504 ARFGEF2Q9Y6D5 1785 aa14.41□□□□□ -0.1
COL4A3-204ENST00000469504 DLG5Q8TDM6 1919 aa14.41□□□□□ -0.1
COL4A3-204ENST00000469504 RIC1Q4ADV7 1423 aa14.41□□□□□ -0.1
COL4A3-204ENST00000469504 FER1L6Q2WGJ9 1857 aa14.4□□□□□ -0.1
COL4A3-204ENST00000469504 HLFQ16534 295 aa14.4□□□□□ -0.1
COL4A3-204ENST00000469504 GRIPAP1Q4V328 841 aa14.4□□□□□ -0.1
COL4A3-204ENST00000469504 RTKN2Q8IZC4 609 aa14.4□□□□□ -0.1
COL4A3-204ENST00000469504 C7orf43Q8WVR3 580 aa14.4□□□□□ -0.1
COL4A3-204ENST00000469504 TIAM2Q8IVF5 1701 aa14.39□□□□□ -0.11
COL4A3-204ENST00000469504 TMPOP42166 694 aaKnown RBP14.39□□□□□ -0.11
COL4A3-204ENST00000469504 CRY2Q49AN0 593 aa14.39□□□□□ -0.11
COL4A3-204ENST00000469504 THUMPD2Q9BTF0 503 aaKnown RBP14.39□□□□□ -0.11
COL4A3-204ENST00000469504 RRP7AQ9Y3A4 280 aaKnown RBP14.39□□□□□ -0.11
COL4A3-204ENST00000469504 WDR90Q96KV7 1748 aa14.38□□□□□ -0.11
COL4A3-204ENST00000469504 FKBP4Q02790 459 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL4A3-204ENST00000469504 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
COL4A3-204ENST00000469504 PARP10Q53GL7 1025 aa14.38□□□□□ -0.11
COL4A3-204ENST00000469504 CC2D2BQ6DHV5 1058 aa14.38□□□□□ -0.11
COL4A3-204ENST00000469504 GIGYF2Q6Y7W6 1299 aaKnown RBP14.38□□□□□ -0.11
COL4A3-204ENST00000469504 DNAJC5GQ8N7S2 189 aa14.38□□□□□ -0.11
COL4A3-204ENST00000469504 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
COL4A3-204ENST00000469504 RNF123Q5XPI4 1314 aa14.38□□□□□ -0.11
COL4A3-204ENST00000469504 MYL6BP14649 208 aa14.37□□□□□ -0.11
COL4A3-204ENST00000469504 WDR43Q15061 677 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL4A3-204ENST00000469504 PPP1R42Q7Z4L9 355 aa14.37□□□□□ -0.11
COL4A3-204ENST00000469504 RUNDC1Q96C34 613 aa14.37□□□□□ -0.11
COL4A3-204ENST00000469504 IQCA1LA6NCM1 817 aa14.36□□□□□ -0.11
COL4A3-204ENST00000469504 HSP90AB3PQ58FF7 597 aa14.36□□□□□ -0.11
COL4A3-204ENST00000469504 TTLL7Q6ZT98 887 aa14.36□□□□□ -0.11
COL4A3-204ENST00000469504 ZNF34Q8IZ26 560 aa14.36□□□□□ -0.11
COL4A3-204ENST00000469504 NGEFQ8N5V2 710 aa14.36□□□□□ -0.11
COL4A3-204ENST00000469504 DICER1Q9UPY3 1922 aaKnown RBP14.36□□□□□ -0.11
COL4A3-204ENST00000469504 SLX4Q8IY92 1834 aa14.36□□□□□ -0.11
COL4A3-204ENST00000469504 FAM177BA6PVY3 158 aa14.35□□□□□ -0.11
COL4A3-204ENST00000469504 HOXB7P09629 217 aa14.35□□□□□ -0.11
COL4A3-204ENST00000469504 HOXA10P31260 410 aaPredicted RBP14.35□□□□□ -0.11
COL4A3-204ENST00000469504 KLRG1Q96E93 195 aa14.35□□□□□ -0.11
COL4A3-204ENST00000469504 PSMD1Q99460 953 aa14.35□□□□□ -0.11
COL4A3-204ENST00000469504 POTECB2RU33 542 aa14.34□□□□□ -0.11
COL4A3-204ENST00000469504 CHL1O00533 1208 aa14.34□□□□□ -0.11
COL4A3-204ENST00000469504 LRP10Q7Z4F1 713 aa14.34□□□□□ -0.11
COL4A3-204ENST00000469504 RPGRQ92834 1020 aaKnown RBP14.34□□□□□ -0.11
COL4A3-204ENST00000469504 RBM17Q96I25 401 aaKnown RBP14.34□□□□□ -0.11
COL4A3-204ENST00000469504 L3MBTL3Q96JM7 780 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms