RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ELOA3CA0A087WX78 387 aaPredicted RBP9.31□□□□□ -0.92
VPS8-219ENST00000469479 ELOA3DA6NLF2 546 aaPredicted RBP9.31□□□□□ -0.92
VPS8-219ENST00000469479 APBA3O96018 575 aa9.31□□□□□ -0.92
VPS8-219ENST00000469479 ELOA3BQ3SY89 546 aa9.31□□□□□ -0.92
VPS8-219ENST00000469479 ELOA3Q8NG57 546 aa9.31□□□□□ -0.92
VPS8-219ENST00000469479 SLC4A9Q96Q91 983 aa9.31□□□□□ -0.92
VPS8-219ENST00000469479 PRSS36Q5K4E3 855 aa9.3□□□□□ -0.92
VPS8-219ENST00000469479 CADPSQ9ULU8 1353 aa9.29□□□□□ -0.92
VPS8-219ENST00000469479 ZNF295-AS1Q8N0V1 137 aa9.29□□□□□ -0.92
VPS8-219ENST00000469479 A6NJY4 79 aa9.28□□□□□ -0.92
VPS8-219ENST00000469479 EFSO43281 561 aa9.28□□□□□ -0.92
VPS8-219ENST00000469479 MTFR1Q15390 333 aa9.28□□□□□ -0.92
VPS8-219ENST00000469479 NACC1Q96RE7 527 aa9.28□□□□□ -0.92
VPS8-219ENST00000469479 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
VPS8-219ENST00000469479 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
VPS8-219ENST00000469479 TBC1D2BQ9UPU7 963 aa9.28□□□□□ -0.92
VPS8-219ENST00000469479 BICDL1Q6ZP65 573 aa9.27□□□□□ -0.93
VPS8-219ENST00000469479 CABP1Q9NZU7 370 aa9.27□□□□□ -0.93
VPS8-219ENST00000469479 LRP8Q14114 963 aa9.26□□□□□ -0.93
VPS8-219ENST00000469479 SYT9Q86SS6 491 aa9.26□□□□□ -0.93
VPS8-219ENST00000469479 MDFIQ99750 246 aa9.26□□□□□ -0.93
VPS8-219ENST00000469479 PRDM6Q9NQX0 595 aa9.26□□□□□ -0.93
VPS8-219ENST00000469479 ADARB2-AS1A8MUL3 147 aa9.25□□□□□ -0.93
VPS8-219ENST00000469479 SIN3BO75182 1162 aa9.25□□□□□ -0.93
VPS8-219ENST00000469479 PLPP7Q8NBV4 271 aa9.25□□□□□ -0.93
VPS8-219ENST00000469479 STRN4Q9NRL3 753 aa9.25□□□□□ -0.93
VPS8-219ENST00000469479 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
VPS8-219ENST00000469479 TMEM229AB2RXF0 380 aa9.24□□□□□ -0.93
VPS8-219ENST00000469479 TRIM28Q13263 835 aaKnown RBP9.24□□□□□ -0.93
VPS8-219ENST00000469479 IRF5Q13568 498 aa9.24□□□□□ -0.93
VPS8-219ENST00000469479 BACH1O14867 736 aa9.23□□□□□ -0.93
VPS8-219ENST00000469479 BCANQ96GW7 911 aa9.23□□□□□ -0.93
VPS8-219ENST00000469479 M0R082 166 aa9.22□□□□□ -0.93
VPS8-219ENST00000469479 ZNF417Q8TAU3 575 aa9.22□□□□□ -0.93
VPS8-219ENST00000469479 ZNF587Q96SQ5 575 aaPredicted RBP9.22□□□□□ -0.93
VPS8-219ENST00000469479 HYAL3O43820 417 aaPredicted RBP9.21□□□□□ -0.94
VPS8-219ENST00000469479 NEUROD4Q9HD90 331 aa9.21□□□□□ -0.94
VPS8-219ENST00000469479 GPC6Q9Y625 555 aaPredicted RBP9.21□□□□□ -0.94
VPS8-219ENST00000469479 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 COBLO75128 1261 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 VAC14Q08AM6 782 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 NEUROD1Q13562 356 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 WASHC4Q2M389 1173 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 TNFRSF25Q93038 417 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 USP3Q9Y6I4 520 aa9.2□□□□□ -0.94
VPS8-219ENST00000469479 SOX11P35716 441 aa9.19□□□□□ -0.94
VPS8-219ENST00000469479 SEMA3FQ13275 785 aa9.19□□□□□ -0.94
VPS8-219ENST00000469479 COL9A3Q14050 684 aaPredicted RBP9.19□□□□□ -0.94
VPS8-219ENST00000469479 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
VPS8-219ENST00000469479 SCHIP1Q9P0W5 487 aaPredicted RBP9.19□□□□□ -0.94
VPS8-219ENST00000469479 PARP3Q9Y6F1 533 aa9.19□□□□□ -0.94
VPS8-219ENST00000469479 ARHGEF11O15085 1522 aa9.18□□□□□ -0.94
VPS8-219ENST00000469479 TXLNAP40222 546 aa9.18□□□□□ -0.94
VPS8-219ENST00000469479 TEAD4Q15561 434 aa9.18□□□□□ -0.94
VPS8-219ENST00000469479 LRRC69Q6ZNQ3 347 aa9.18□□□□□ -0.94
VPS8-219ENST00000469479 L3MBTL2Q969R5 705 aa9.18□□□□□ -0.94
VPS8-219ENST00000469479 PCDHGA11Q9Y5H2 935 aa9.18□□□□□ -0.94
VPS8-219ENST00000469479 FANCD2Q9BXW9 1451 aa9.17□□□□□ -0.94
VPS8-219ENST00000469479 C9orf172C9J069 976 aa9.17□□□□□ -0.94
VPS8-219ENST00000469479 EML1O00423 815 aa9.17□□□□□ -0.94
VPS8-219ENST00000469479 STARD13Q9Y3M8 1113 aa9.17□□□□□ -0.94
VPS8-219ENST00000469479 FAM229AH3BQW9 127 aa9.16□□□□□ -0.94
VPS8-219ENST00000469479 LZTS3O60299 673 aaPredicted RBP9.16□□□□□ -0.94
VPS8-219ENST00000469479 ALBP02768 609 aa9.16□□□□□ -0.94
VPS8-219ENST00000469479 H2AFB1P0C5Y9 115 aa9.16□□□□□ -0.94
VPS8-219ENST00000469479 H2AFB2P0C5Z0 115 aa9.16□□□□□ -0.94
VPS8-219ENST00000469479 NID1P14543 1247 aa9.15□□□□□ -0.94
VPS8-219ENST00000469479 NOS2P35228 1153 aa9.15□□□□□ -0.94
VPS8-219ENST00000469479 BRPF1P55201 1214 aaPredicted RBP9.15□□□□□ -0.94
VPS8-219ENST00000469479 GRIK4Q16099 956 aa9.15□□□□□ -0.94
VPS8-219ENST00000469479 ZDHHC1Q8WTX9 485 aa9.15□□□□□ -0.94
VPS8-219ENST00000469479 ADH7P40394 386 aa9.14□□□□□ -0.95
VPS8-219ENST00000469479 SFSWAPQ12872 951 aaKnown RBP9.14□□□□□ -0.95
VPS8-219ENST00000469479 EML3Q32P44 896 aa9.14□□□□□ -0.95
VPS8-219ENST00000469479 C7orf43Q8WVR3 580 aa9.14□□□□□ -0.95
VPS8-219ENST00000469479 SLC30A3Q99726 388 aa9.14□□□□□ -0.95
VPS8-219ENST00000469479 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
VPS8-219ENST00000469479 TXKP42681 527 aa9.13□□□□□ -0.95
VPS8-219ENST00000469479 SPEM2Q0P670 501 aa9.13□□□□□ -0.95
VPS8-219ENST00000469479 TRAPPC3LQ5T215 181 aa9.13□□□□□ -0.95
VPS8-219ENST00000469479 MCTP1Q6DN14 999 aa9.13□□□□□ -0.95
VPS8-219ENST00000469479 KRTAP4-7Q9BYR0 210 aa9.13□□□□□ -0.95
VPS8-219ENST00000469479 ZNF232Q9UNY5 417 aa9.13□□□□□ -0.95
VPS8-219ENST00000469479 MROH2BQ7Z745 1585 aa9.12□□□□□ -0.95
VPS8-219ENST00000469479 NRG1Q02297 640 aaPredicted RBP9.12□□□□□ -0.95
VPS8-219ENST00000469479 ADGRE1Q14246 886 aa9.12□□□□□ -0.95
VPS8-219ENST00000469479 C20orf204Q6ZNR8 217 aa9.12□□□□□ -0.95
VPS8-219ENST00000469479 C8orf86Q6ZUL3 223 aa9.12□□□□□ -0.95
VPS8-219ENST00000469479 GDPD2Q9HCC8 539 aa9.12□□□□□ -0.95
VPS8-219ENST00000469479 ZNF358Q9NW07 568 aa9.12□□□□□ -0.95
VPS8-219ENST00000469479 SERTM1A2A2V5 107 aa9.11□□□□□ -0.95
VPS8-219ENST00000469479 PAX4O43316 350 aa9.11□□□□□ -0.95
VPS8-219ENST00000469479 LILRB5O75023 590 aa9.11□□□□□ -0.95
VPS8-219ENST00000469479 ELNP15502 786 aa9.11□□□□□ -0.95
VPS8-219ENST00000469479 YBX3P16989 372 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS8-219ENST00000469479 ABL2P42684 1182 aa9.11□□□□□ -0.95
VPS8-219ENST00000469479 ANKIB1Q9P2G1 1089 aa9.11□□□□□ -0.95
VPS8-219ENST00000469479 CFTRP13569 1480 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms