RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ABCC4O15439 1325 aa10.43□□□□□ -0.74
NPHP3-204ENST00000469232 N4BP2Q86UW6 1770 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-204ENST00000469232 LOC102724428A0A0B4J2F2 783 aa10.43□□□□□ -0.74
NPHP3-204ENST00000469232 CYP19A1P11511 503 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-204ENST00000469232 MS4A1P11836 297 aa10.43□□□□□ -0.74
NPHP3-204ENST00000469232 SIK1P57059 783 aa10.43□□□□□ -0.74
NPHP3-204ENST00000469232 BCL2L13Q9BXK5 485 aa10.43□□□□□ -0.74
NPHP3-204ENST00000469232 STK31Q9BXU1 1019 aa10.43□□□□□ -0.74
NPHP3-204ENST00000469232 HYPKQ9NX55 129 aa10.43□□□□□ -0.74
NPHP3-204ENST00000469232 NOB1Q9ULX3 412 aaKnown RBP10.43□□□□□ -0.74
NPHP3-204ENST00000469232 RGPD3A6NKT7 1758 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-204ENST00000469232 RGPD4Q7Z3J3 1758 aa10.43□□□□□ -0.74
NPHP3-204ENST00000469232 PXDNLA1KZ92 1463 aa10.42□□□□□ -0.74
NPHP3-204ENST00000469232 NBPF26B4DH59 902 aa10.42□□□□□ -0.74
NPHP3-204ENST00000469232 PTCD1O75127 700 aaKnown RBP10.42□□□□□ -0.74
NPHP3-204ENST00000469232 FAM182BQ5T319 152 aa10.42□□□□□ -0.74
NPHP3-204ENST00000469232 NBPF14Q5TI25 921 aa10.42□□□□□ -0.74
NPHP3-204ENST00000469232 NBPF10Q6P3W6 841 aaKnown RBP10.42□□□□□ -0.74
NPHP3-204ENST00000469232 G2E3Q7L622 706 aa10.42□□□□□ -0.74
NPHP3-204ENST00000469232 NBPF15Q8N660 670 aa10.42□□□□□ -0.74
NPHP3-204ENST00000469232 TMEM106CQ9BVX2 250 aa10.42□□□□□ -0.74
NPHP3-204ENST00000469232 API5Q9BZZ5 524 aaKnown RBP10.42□□□□□ -0.74
NPHP3-204ENST00000469232 CHPF2Q9P2E5 772 aa10.42□□□□□ -0.74
NPHP3-204ENST00000469232 TNS1Q9HBL0 1735 aaKnown RBP10.42□□□□□ -0.74
NPHP3-204ENST00000469232 EP400Q96L91 3159 aa10.41□□□□□ -0.74
NPHP3-204ENST00000469232 PLIN1O60240 522 aa10.41□□□□□ -0.74
NPHP3-204ENST00000469232 RLBP1P12271 317 aa10.41□□□□□ -0.74
NPHP3-204ENST00000469232 FLIIQ13045 1269 aa10.41□□□□□ -0.74
NPHP3-204ENST00000469232 PROSER3Q2NL68 480 aa10.41□□□□□ -0.74
NPHP3-204ENST00000469232 C20orf194Q5TEA3 1177 aa10.41□□□□□ -0.74
NPHP3-204ENST00000469232 ZNF467Q7Z7K2 595 aaPredicted RBP10.41□□□□□ -0.74
NPHP3-204ENST00000469232 DNAJC10Q8IXB1 793 aa10.41□□□□□ -0.74
NPHP3-204ENST00000469232 SYTL4Q96C24 671 aaPredicted RBP10.41□□□□□ -0.74
NPHP3-204ENST00000469232 PLSCR1O15162 318 aa10.4□□□□□ -0.74
NPHP3-204ENST00000469232 STARD3NLO95772 234 aa10.4□□□□□ -0.74
NPHP3-204ENST00000469232 ITPK1Q13572 414 aa10.4□□□□□ -0.74
NPHP3-204ENST00000469232 AAMPQ13685 434 aa10.4□□□□□ -0.74
NPHP3-204ENST00000469232 RC3H1Q5TC82 1133 aaKnown RBP10.4□□□□□ -0.74
NPHP3-204ENST00000469232 INTS3Q68E01 1043 aaKnown RBP10.4□□□□□ -0.74
NPHP3-204ENST00000469232 KAT6BQ8WYB5 2073 aa10.4□□□□□ -0.74
NPHP3-204ENST00000469232 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.74
NPHP3-204ENST00000469232 ATP10DQ9P241 1426 aa10.4□□□□□ -0.75
NPHP3-204ENST00000469232 CNTNAP4Q9C0A0 1308 aa10.4□□□□□ -0.75
NPHP3-204ENST00000469232 POTEB2H3BUK9 544 aa10.4□□□□□ -0.75
NPHP3-204ENST00000469232 EIF2S2P20042 333 aaKnown RBP10.4□□□□□ -0.75
NPHP3-204ENST00000469232 INTS5Q6P9B9 1019 aaKnown RBP10.4□□□□□ -0.75
NPHP3-204ENST00000469232 DZIP1LQ8IYY4 767 aaKnown RBP10.4□□□□□ -0.75
NPHP3-204ENST00000469232 TNNQ9UQP3 1299 aa10.4□□□□□ -0.75
NPHP3-204ENST00000469232 MYH14Q7Z406 1995 aaKnown RBP10.39□□□□□ -0.75
NPHP3-204ENST00000469232 ADCY9O60503 1353 aa10.39□□□□□ -0.75
NPHP3-204ENST00000469232 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
NPHP3-204ENST00000469232 RGL2O15211 777 aa10.39□□□□□ -0.75
NPHP3-204ENST00000469232 PHAXQ9H814 394 aaKnown RBP10.39□□□□□ -0.75
NPHP3-204ENST00000469232 A1BGP04217 495 aa10.38□□□□□ -0.75
NPHP3-204ENST00000469232 HMGB2P26583 209 aaKnown RBP10.38□□□□□ -0.75
NPHP3-204ENST00000469232 IL6STP40189 918 aaPredicted RBP10.38□□□□□ -0.75
NPHP3-204ENST00000469232 EIF5P55010 431 aaKnown RBP10.38□□□□□ -0.75
NPHP3-204ENST00000469232 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
NPHP3-204ENST00000469232 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
NPHP3-204ENST00000469232 NUP188Q5SRE5 1749 aa10.38□□□□□ -0.75
NPHP3-204ENST00000469232 TRIM37O94972 964 aa10.37□□□□□ -0.75
NPHP3-204ENST00000469232 NEFLP07196 543 aa10.37□□□□□ -0.75
NPHP3-204ENST00000469232 ATP6V1AP38606 617 aa10.37□□□□□ -0.75
NPHP3-204ENST00000469232 MVPQ14764 893 aaKnown RBP10.37□□□□□ -0.75
NPHP3-204ENST00000469232 KSR2Q6VAB6 950 aa10.37□□□□□ -0.75
NPHP3-204ENST00000469232 PANK1Q8TE04 598 aa10.37□□□□□ -0.75
NPHP3-204ENST00000469232 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
NPHP3-204ENST00000469232 CCDC87Q9NVE4 849 aa10.37□□□□□ -0.75
NPHP3-204ENST00000469232 ANXA1P04083 346 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 TMEM57Q8N5G2 664 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 LINC00116Q8NCU8 138 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 CRBNQ96SW2 442 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 CRKLP46109 303 aaKnown RBP10.36□□□□□ -0.75
NPHP3-204ENST00000469232 CCT4P50991 539 aaKnown RBP10.36□□□□□ -0.75
NPHP3-204ENST00000469232 COPS6Q7L5N1 327 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 PLBD2Q8NHP8 589 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 EXOC6Q8TAG9 804 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 XAGE3Q8WTP9 111 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 LRRC4BQ9NT99 713 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 ZBTB1Q9Y2K1 713 aa10.36□□□□□ -0.75
NPHP3-204ENST00000469232 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 PI4KAP2A4QPH2 592 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 POTEFA5A3E0 1075 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 ZBTB7BO15156 539 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-204ENST00000469232 TRIM28Q13263 835 aaKnown RBP10.35□□□□□ -0.75
NPHP3-204ENST00000469232 FKBP5Q13451 457 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-204ENST00000469232 BEND3Q5T5X7 828 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 PI4KAP1Q8N8J0 262 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 DNAAF4Q8WXU2 420 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 ZBTB40Q9NUA8 1239 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-204ENST00000469232 DDX19BQ9UMR2 479 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 GTF3C3Q9Y5Q9 886 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 ARFGEF2Q9Y6D5 1785 aa10.35□□□□□ -0.75
NPHP3-204ENST00000469232 ERVV-1B6SEH8 477 aa10.34□□□□□ -0.75
NPHP3-204ENST00000469232 RPS6KA4O75676 772 aa10.34□□□□□ -0.75
NPHP3-204ENST00000469232 ALDH1L1O75891 902 aa10.34□□□□□ -0.75
NPHP3-204ENST00000469232 DDX58O95786 925 aaKnown RBP10.34□□□□□ -0.75
NPHP3-204ENST00000469232 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
NPHP3-204ENST00000469232 IER5LQ5T953 404 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms