RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 ST5P78524 1137 aa19.52■□□□□ 0.72
SNED1-209ENST00000469006 STYK1Q6J9G0 422 aa19.52■□□□□ 0.72
SNED1-209ENST00000469006 PRPF40BQ6NWY9 871 aaKnown RBP19.52■□□□□ 0.72
SNED1-209ENST00000469006 CNKSR1Q969H4 720 aa19.52■□□□□ 0.72
SNED1-209ENST00000469006 SLX4Q8IY92 1834 aa19.52■□□□□ 0.72
SNED1-209ENST00000469006 BTBD11A6QL63 1104 aa19.51■□□□□ 0.71
SNED1-209ENST00000469006 DZIP3Q86Y13 1208 aaKnown RBP19.51■□□□□ 0.71
SNED1-209ENST00000469006 SRGNP10124 158 aa19.5■□□□□ 0.71
SNED1-209ENST00000469006 PHACTR3Q96KR7 559 aa19.5■□□□□ 0.71
SNED1-209ENST00000469006 PRKAR2BP31323 418 aa19.49■□□□□ 0.71
SNED1-209ENST00000469006 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
SNED1-209ENST00000469006 SOGA3Q5TF21 947 aa19.49■□□□□ 0.71
SNED1-209ENST00000469006 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
SNED1-209ENST00000469006 MASTLQ96GX5 879 aa19.49■□□□□ 0.71
SNED1-209ENST00000469006 DDNO94850 711 aaPredicted RBP19.48■□□□□ 0.71
SNED1-209ENST00000469006 POTEIP0CG38 1075 aa19.48■□□□□ 0.71
SNED1-209ENST00000469006 POTEJP0CG39 1038 aa19.48■□□□□ 0.71
SNED1-209ENST00000469006 RSPH6AQ9H0K4 717 aa19.48■□□□□ 0.71
SNED1-209ENST00000469006 NBPF5PQ86XG9 351 aaPredicted RBP19.47■□□□□ 0.71
SNED1-209ENST00000469006 USP16Q9Y5T5 823 aa19.47■□□□□ 0.71
SNED1-209ENST00000469006 PRAMEF22A3QJZ6 481 aa19.46■□□□□ 0.71
SNED1-209ENST00000469006 CREBZFQ9NS37 354 aa19.46■□□□□ 0.71
SNED1-209ENST00000469006 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
SNED1-209ENST00000469006 MKRN1Q9UHC7 482 aaKnown RBP19.45■□□□□ 0.7
SNED1-209ENST00000469006 ZNF652Q9Y2D9 606 aa19.45■□□□□ 0.7
SNED1-209ENST00000469006 CCDC93Q567U6 631 aa19.44■□□□□ 0.7
SNED1-209ENST00000469006 CLEC4GQ6UXB4 293 aa19.44■□□□□ 0.7
SNED1-209ENST00000469006 IQCA1LA6NCM1 817 aa19.43■□□□□ 0.7
SNED1-209ENST00000469006 SNRPA1P09661 255 aaKnown RBP19.43■□□□□ 0.7
SNED1-209ENST00000469006 NPR1P16066 1061 aa19.43■□□□□ 0.7
SNED1-209ENST00000469006 MCM10Q7L590 875 aa19.43■□□□□ 0.7
SNED1-209ENST00000469006 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
SNED1-209ENST00000469006 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
SNED1-209ENST00000469006 L3MBTL3Q96JM7 780 aaPredicted RBP19.42■□□□□ 0.7
SNED1-209ENST00000469006 SCN4AP35499 1836 aa19.41■□□□□ 0.7
SNED1-209ENST00000469006 LDHDQ86WU2 507 aa19.41■□□□□ 0.7
SNED1-209ENST00000469006 TAF1DQ9H5J8 278 aaPredicted RBP19.41■□□□□ 0.7
SNED1-209ENST00000469006 NIP7Q9Y221 180 aaKnown RBP eCLIP19.41■□□□□ 0.7
SNED1-209ENST00000469006 NUDCQ9Y266 331 aa19.41■□□□□ 0.7
SNED1-209ENST00000469006 ZNF541Q9H0D2 1346 aa19.41■□□□□ 0.7
SNED1-209ENST00000469006 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
SNED1-209ENST00000469006 FKBP4Q02790 459 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNED1-209ENST00000469006 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
SNED1-209ENST00000469006 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
SNED1-209ENST00000469006 ZNF277Q9NRM2 450 aaPredicted RBP19.4■□□□□ 0.7
SNED1-209ENST00000469006 PASKQ96RG2 1323 aa19.4■□□□□ 0.7
SNED1-209ENST00000469006 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
SNED1-209ENST00000469006 KLRG2A4D1S0 409 aaPredicted RBP19.39■□□□□ 0.69
SNED1-209ENST00000469006 FAM177BA6PVY3 158 aa19.39■□□□□ 0.69
SNED1-209ENST00000469006 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.69
SNED1-209ENST00000469006 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.69
SNED1-209ENST00000469006 DCTN1Q14203 1278 aa19.39■□□□□ 0.69
SNED1-209ENST00000469006 OLFM4Q6UX06 510 aa19.39■□□□□ 0.69
SNED1-209ENST00000469006 TPTE2Q6XPS3 522 aa19.39■□□□□ 0.69
SNED1-209ENST00000469006 LAMB4A4D0S4 1761 aa19.38■□□□□ 0.69
SNED1-209ENST00000469006 RGL2O15211 777 aa19.38■□□□□ 0.69
SNED1-209ENST00000469006 EAPPQ56P03 285 aaPredicted RBP19.37■□□□□ 0.69
SNED1-209ENST00000469006 RTKN2Q8IZC4 609 aa19.36■□□□□ 0.69
SNED1-209ENST00000469006 HACL1Q9UJ83 578 aa19.36■□□□□ 0.69
SNED1-209ENST00000469006 ADAMTSL1Q8N6G6 1762 aa19.36■□□□□ 0.69
SNED1-209ENST00000469006 FOXN1O15353 648 aa19.35■□□□□ 0.69
SNED1-209ENST00000469006 PPP2R1AP30153 589 aa19.35■□□□□ 0.69
SNED1-209ENST00000469006 HLFQ16534 295 aa19.35■□□□□ 0.69
SNED1-209ENST00000469006 ABCC12Q96J65 1359 aa19.34■□□□□ 0.69
SNED1-209ENST00000469006 TMEM88BA6NKF7 163 aa19.34■□□□□ 0.69
SNED1-209ENST00000469006 HTATSF1O43719 755 aaKnown RBP19.34■□□□□ 0.69
SNED1-209ENST00000469006 ITGBL1O95965 494 aaPredicted RBP19.34■□□□□ 0.69
SNED1-209ENST00000469006 GTF2E1P29083 439 aaPredicted RBP19.34■□□□□ 0.69
SNED1-209ENST00000469006 EPHX2P34913 555 aa19.34■□□□□ 0.69
SNED1-209ENST00000469006 IARSP41252 1262 aaKnown RBP19.34■□□□□ 0.69
SNED1-209ENST00000469006 CLEC11AQ9Y240 323 aa19.34■□□□□ 0.69
SNED1-209ENST00000469006 SNED1Q8TER0 1413 aa19.34■□□□□ 0.69
SNED1-209ENST00000469006 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
SNED1-209ENST00000469006 ALDH1B1P30837 517 aa19.33■□□□□ 0.68
SNED1-209ENST00000469006 FZD9O00144 591 aa19.32■□□□□ 0.68
SNED1-209ENST00000469006 VEGFBP49765 207 aa19.32■□□□□ 0.68
SNED1-209ENST00000469006 TAF7Q15545 349 aaPredicted RBP19.32■□□□□ 0.68
SNED1-209ENST00000469006 SYNE4Q8N205 404 aa19.32■□□□□ 0.68
SNED1-209ENST00000469006 MIS18AQ9NYP9 233 aa19.32■□□□□ 0.68
SNED1-209ENST00000469006 AIDAQ96BJ3 306 aa19.31■□□□□ 0.68
SNED1-209ENST00000469006 KDM3BQ7LBC6 1761 aa19.31■□□□□ 0.68
SNED1-209ENST00000469006 CRY2Q49AN0 593 aa19.3■□□□□ 0.68
SNED1-209ENST00000469006 PNMA8AQ86V59 439 aaPredicted RBP19.3■□□□□ 0.68
SNED1-209ENST00000469006 NUTM1Q86Y26 1132 aa19.3■□□□□ 0.68
SNED1-209ENST00000469006 NGEFQ8N5V2 710 aa19.3■□□□□ 0.68
SNED1-209ENST00000469006 PSMD1Q99460 953 aa19.3■□□□□ 0.68
SNED1-209ENST00000469006 NYXQ9GZU5 481 aa19.3■□□□□ 0.68
SNED1-209ENST00000469006 COL4A5P29400 1685 aa19.3■□□□□ 0.68
SNED1-209ENST00000469006 CTCFP49711 727 aaPredicted RBP19.29■□□□□ 0.68
SNED1-209ENST00000469006 MAP1SQ66K74 1059 aaPredicted RBP19.29■□□□□ 0.68
SNED1-209ENST00000469006 GPC2Q8N158 579 aa19.29■□□□□ 0.68
SNED1-209ENST00000469006 JDP2Q8WYK2 163 aa19.29■□□□□ 0.68
SNED1-209ENST00000469006 PRDM10Q9NQV6 1147 aa19.29■□□□□ 0.68
SNED1-209ENST00000469006 MAP3K15Q6ZN16 1313 aa19.28■□□□□ 0.68
SNED1-209ENST00000469006 NUP98P52948 1817 aa19.28■□□□□ 0.68
SNED1-209ENST00000469006 KIF6Q6ZMV9 814 aa19.28■□□□□ 0.68
SNED1-209ENST00000469006 CNTROBQ8N137 903 aa19.28■□□□□ 0.68
SNED1-209ENST00000469006 IBTKQ9P2D0 1353 aaPredicted RBP19.28■□□□□ 0.68
SNED1-209ENST00000469006 DLG5Q8TDM6 1919 aa19.27■□□□□ 0.68
SNED1-209ENST00000469006 RIC1Q4ADV7 1423 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms