RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 PDZRN3Q9UPQ7 1066 aa13.99□□□□□ -0.17
TGFBR3-205ENST00000468996 GTF2E1P29083 439 aaPredicted RBP13.98□□□□□ -0.17
TGFBR3-205ENST00000468996 AFDNP55196 1824 aaKnown RBP13.97□□□□□ -0.17
TGFBR3-205ENST00000468996 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
TGFBR3-205ENST00000468996 LMNB1P20700 586 aa13.97□□□□□ -0.17
TGFBR3-205ENST00000468996 C16orf71Q8IYS4 520 aaPredicted RBP13.97□□□□□ -0.17
TGFBR3-205ENST00000468996 RRAGCQ9HB90 399 aa13.97□□□□□ -0.17
TGFBR3-205ENST00000468996 ADAMTS8Q9UP79 889 aa13.97□□□□□ -0.17
TGFBR3-205ENST00000468996 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
TGFBR3-205ENST00000468996 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.17
TGFBR3-205ENST00000468996 SRGNP10124 158 aa13.96□□□□□ -0.17
TGFBR3-205ENST00000468996 LMOD3Q0VAK6 560 aa13.96□□□□□ -0.17
TGFBR3-205ENST00000468996 KIF6Q6ZMV9 814 aa13.96□□□□□ -0.17
TGFBR3-205ENST00000468996 TTLL7Q6ZT98 887 aa13.96□□□□□ -0.17
TGFBR3-205ENST00000468996 CNKSR1Q969H4 720 aa13.96□□□□□ -0.17
TGFBR3-205ENST00000468996 TOMM70O94826 608 aa13.95□□□□□ -0.18
TGFBR3-205ENST00000468996 STYK1Q6J9G0 422 aa13.95□□□□□ -0.18
TGFBR3-205ENST00000468996 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
TGFBR3-205ENST00000468996 RUNDC1Q96C34 613 aa13.95□□□□□ -0.18
TGFBR3-205ENST00000468996 MASTLQ96GX5 879 aa13.95□□□□□ -0.18
TGFBR3-205ENST00000468996 ZBTB3Q9H5J0 574 aa13.95□□□□□ -0.18
TGFBR3-205ENST00000468996 BRCA1P38398 1863 aaKnown RBP13.95□□□□□ -0.18
TGFBR3-205ENST00000468996 HSPA6P17066 643 aa13.94□□□□□ -0.18
TGFBR3-205ENST00000468996 PRELPP51888 382 aa13.94□□□□□ -0.18
TGFBR3-205ENST00000468996 PRKRIP1Q9H875 184 aaPredicted RBP13.94□□□□□ -0.18
TGFBR3-205ENST00000468996 NRXN2Q9P2S2 1712 aa13.94□□□□□ -0.18
TGFBR3-205ENST00000468996 ARFGEF1Q9Y6D6 1849 aa13.93□□□□□ -0.18
TGFBR3-205ENST00000468996 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
TGFBR3-205ENST00000468996 NFKBIEO00221 500 aa13.93□□□□□ -0.18
TGFBR3-205ENST00000468996 RGL2O15211 777 aa13.93□□□□□ -0.18
TGFBR3-205ENST00000468996 GPTP24298 496 aa13.93□□□□□ -0.18
TGFBR3-205ENST00000468996 PRPF40BQ6NWY9 871 aaKnown RBP13.93□□□□□ -0.18
TGFBR3-205ENST00000468996 MAP3K15Q6ZN16 1313 aa13.92□□□□□ -0.18
TGFBR3-205ENST00000468996 DLG5Q8TDM6 1919 aa13.92□□□□□ -0.18
TGFBR3-205ENST00000468996 ANXA1P04083 346 aa13.92□□□□□ -0.18
TGFBR3-205ENST00000468996 NPR1P16066 1061 aa13.92□□□□□ -0.18
TGFBR3-205ENST00000468996 NUTM1Q86Y26 1132 aa13.92□□□□□ -0.18
TGFBR3-205ENST00000468996 BABAM1Q9NWV8 329 aa13.92□□□□□ -0.18
TGFBR3-205ENST00000468996 SCN7AQ01118 1682 aa13.91□□□□□ -0.18
TGFBR3-205ENST00000468996 ERFEQ4G0M1 354 aa13.91□□□□□ -0.18
TGFBR3-205ENST00000468996 DPY19L2Q6NUT2 758 aa13.91□□□□□ -0.18
TGFBR3-205ENST00000468996 NYXQ9GZU5 481 aa13.91□□□□□ -0.18
TGFBR3-205ENST00000468996 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
TGFBR3-205ENST00000468996 TRIM35Q9UPQ4 493 aa13.91□□□□□ -0.18
TGFBR3-205ENST00000468996 CEP350Q5VT06 3117 aa13.91□□□□□ -0.18
TGFBR3-205ENST00000468996 GLTPD2A6NH11 291 aa13.9□□□□□ -0.18
TGFBR3-205ENST00000468996 CHL1O00533 1208 aa13.9□□□□□ -0.18
TGFBR3-205ENST00000468996 AIMP1Q12904 312 aaKnown RBP13.9□□□□□ -0.18
TGFBR3-205ENST00000468996 PROSER3Q2NL68 480 aa13.9□□□□□ -0.18
TGFBR3-205ENST00000468996 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
TGFBR3-205ENST00000468996 KLRG2A4D1S0 409 aaPredicted RBP13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 VEGFAP15692 232 aaPredicted RBP13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 PDIA6Q15084 440 aa13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 KRT24Q2M2I5 525 aa13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 SOGA3Q5TF21 947 aa13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 COPS6Q7L5N1 327 aa13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 RBM46Q8TBY0 533 aaKnown RBP13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 ANKRD31Q8N7Z5 1873 aa13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 ERBB4Q15303 1308 aa13.89□□□□□ -0.19
TGFBR3-205ENST00000468996 OLFM4Q6UX06 510 aa13.88□□□□□ -0.19
TGFBR3-205ENST00000468996 GIGYF2Q6Y7W6 1299 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-205ENST00000468996 ZNF34Q8IZ26 560 aa13.88□□□□□ -0.19
TGFBR3-205ENST00000468996 C7orf43Q8WVR3 580 aa13.88□□□□□ -0.19
TGFBR3-205ENST00000468996 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-205ENST00000468996 APAF1O14727 1248 aa13.87□□□□□ -0.19
TGFBR3-205ENST00000468996 ZEB1P37275 1124 aaPredicted RBP13.87□□□□□ -0.19
TGFBR3-205ENST00000468996 APLP1P51693 650 aa13.87□□□□□ -0.19
TGFBR3-205ENST00000468996 CCDC93Q567U6 631 aa13.87□□□□□ -0.19
TGFBR3-205ENST00000468996 PPP1R42Q7Z4L9 355 aa13.87□□□□□ -0.19
TGFBR3-205ENST00000468996 XAGE3Q8WTP9 111 aa13.87□□□□□ -0.19
TGFBR3-205ENST00000468996 RPGRQ92834 1020 aaKnown RBP13.87□□□□□ -0.19
TGFBR3-205ENST00000468996 UBN2Q6ZU65 1347 aa13.87□□□□□ -0.19
TGFBR3-205ENST00000468996 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
TGFBR3-205ENST00000468996 TCERG1O14776 1098 aaKnown RBP13.86□□□□□ -0.19
TGFBR3-205ENST00000468996 LRP10Q7Z4F1 713 aa13.86□□□□□ -0.19
TGFBR3-205ENST00000468996 ZNF428Q96B54 188 aa13.86□□□□□ -0.19
TGFBR3-205ENST00000468996 SBF1O95248 1867 aa13.86□□□□□ -0.19
TGFBR3-205ENST00000468996 BCORQ6W2J9 1755 aa13.86□□□□□ -0.19
TGFBR3-205ENST00000468996 SLX4Q8IY92 1834 aa13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 DDNO94850 711 aaPredicted RBP13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 FSTL1Q12841 308 aa13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 PARP10Q53GL7 1025 aa13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 HDGFL1Q5TGJ6 251 aa13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 RTKN2Q8IZC4 609 aa13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 CFAP44Q96MT7 982 aa13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 UTP14AQ9BVJ6 771 aaKnown RBP13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 ZNF277Q9NRM2 450 aaPredicted RBP13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 DLEC1Q9Y238 1755 aa13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 LTBP3Q9NS15 1303 aa13.85□□□□□ -0.19
TGFBR3-205ENST00000468996 NTSR2O95665 410 aa13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 FKBP4Q02790 459 aaKnown RBP eCLIP13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 SMC1BQ8NDV3 1235 aa13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 NLRP3Q96P20 1036 aa13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 DDX21Q9NR30 783 aaKnown RBP eCLIP13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 CHPF2Q9P2E5 772 aa13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 COL11A2P13942 1736 aaPredicted RBP13.84□□□□□ -0.19
TGFBR3-205ENST00000468996 ABCC12Q96J65 1359 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms