RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 ST5P78524 1137 aa19.57■□□□□ 0.72
SDCCAG3-209ENST00000468963 HLFQ16534 295 aa19.57■□□□□ 0.72
SDCCAG3-209ENST00000468963 STYK1Q6J9G0 422 aa19.57■□□□□ 0.72
SDCCAG3-209ENST00000468963 ZNF652Q9Y2D9 606 aa19.57■□□□□ 0.72
SDCCAG3-209ENST00000468963 KLRG2A4D1S0 409 aaPredicted RBP19.56■□□□□ 0.72
SDCCAG3-209ENST00000468963 DDX10Q13206 875 aaKnown RBP19.56■□□□□ 0.72
SDCCAG3-209ENST00000468963 NBPF5PQ86XG9 351 aaPredicted RBP19.56■□□□□ 0.72
SDCCAG3-209ENST00000468963 RBM46Q8TBY0 533 aaKnown RBP19.56■□□□□ 0.72
SDCCAG3-209ENST00000468963 CNKSR1Q969H4 720 aa19.56■□□□□ 0.72
SDCCAG3-209ENST00000468963 BCORQ6W2J9 1755 aa19.55■□□□□ 0.72
SDCCAG3-209ENST00000468963 TPTE2Q6XPS3 522 aa19.55■□□□□ 0.72
SDCCAG3-209ENST00000468963 MASTLQ96GX5 879 aa19.55■□□□□ 0.72
SDCCAG3-209ENST00000468963 NIP7Q9Y221 180 aaKnown RBP eCLIP19.55■□□□□ 0.72
SDCCAG3-209ENST00000468963 MAPK8IP3Q9UPT6 1336 aa19.54■□□□□ 0.72
SDCCAG3-209ENST00000468963 GLTPD2A6NH11 291 aa19.54■□□□□ 0.72
SDCCAG3-209ENST00000468963 NPHP1O15259 732 aa19.54■□□□□ 0.72
SDCCAG3-209ENST00000468963 ZNF219Q9P2Y4 722 aaPredicted RBP19.54■□□□□ 0.72
SDCCAG3-209ENST00000468963 APLP1P51693 650 aa19.53■□□□□ 0.72
SDCCAG3-209ENST00000468963 RIPK4P57078 832 aa19.53■□□□□ 0.72
SDCCAG3-209ENST00000468963 C7orf43Q8WVR3 580 aa19.53■□□□□ 0.72
SDCCAG3-209ENST00000468963 CCDC88AQ3V6T2 1871 aa19.52■□□□□ 0.72
SDCCAG3-209ENST00000468963 ERVV-1B6SEH8 477 aa19.52■□□□□ 0.72
SDCCAG3-209ENST00000468963 C16orf71Q8IYS4 520 aaPredicted RBP19.52■□□□□ 0.72
SDCCAG3-209ENST00000468963 NGEFQ8N5V2 710 aa19.52■□□□□ 0.72
SDCCAG3-209ENST00000468963 RRP7AQ9Y3A4 280 aaKnown RBP19.52■□□□□ 0.72
SDCCAG3-209ENST00000468963 KDM3BQ7LBC6 1761 aa19.52■□□□□ 0.71
SDCCAG3-209ENST00000468963 COL11A2P13942 1736 aaPredicted RBP19.51■□□□□ 0.71
SDCCAG3-209ENST00000468963 SLX4Q8IY92 1834 aa19.51■□□□□ 0.71
SDCCAG3-209ENST00000468963 TMPOP42166 694 aaKnown RBP19.51■□□□□ 0.71
SDCCAG3-209ENST00000468963 FSTL1Q12841 308 aa19.51■□□□□ 0.71
SDCCAG3-209ENST00000468963 PRPF40BQ6NWY9 871 aaKnown RBP19.51■□□□□ 0.71
SDCCAG3-209ENST00000468963 DNAJC5GQ8N7S2 189 aa19.51■□□□□ 0.71
SDCCAG3-209ENST00000468963 LTBP3Q9NS15 1303 aa19.51■□□□□ 0.71
SDCCAG3-209ENST00000468963 NPR1P16066 1061 aa19.5■□□□□ 0.71
SDCCAG3-209ENST00000468963 TTLL7Q6ZT98 887 aa19.5■□□□□ 0.71
SDCCAG3-209ENST00000468963 BABAM1Q9NWV8 329 aa19.5■□□□□ 0.71
SDCCAG3-209ENST00000468963 MAP3K15Q6ZN16 1313 aa19.5■□□□□ 0.71
SDCCAG3-209ENST00000468963 FAM177BA6PVY3 158 aa19.49■□□□□ 0.71
SDCCAG3-209ENST00000468963 POTECB2RU33 542 aa19.49■□□□□ 0.71
SDCCAG3-209ENST00000468963 VEGFAP15692 232 aaPredicted RBP19.49■□□□□ 0.71
SDCCAG3-209ENST00000468963 TSPYL4Q9UJ04 414 aa19.49■□□□□ 0.71
SDCCAG3-209ENST00000468963 FER1L6Q2WGJ9 1857 aa19.49■□□□□ 0.71
SDCCAG3-209ENST00000468963 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
SDCCAG3-209ENST00000468963 MYL6BP14649 208 aa19.48■□□□□ 0.71
SDCCAG3-209ENST00000468963 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
SDCCAG3-209ENST00000468963 TAOK3Q9H2K8 898 aa19.48■□□□□ 0.71
SDCCAG3-209ENST00000468963 PDIA6Q15084 440 aa19.47■□□□□ 0.71
SDCCAG3-209ENST00000468963 ERFEQ4G0M1 354 aa19.47■□□□□ 0.71
SDCCAG3-209ENST00000468963 LRP10Q7Z4F1 713 aa19.47■□□□□ 0.71
SDCCAG3-209ENST00000468963 ERBB4Q15303 1308 aa19.47■□□□□ 0.71
SDCCAG3-209ENST00000468963 LAMB4A4D0S4 1761 aa19.47■□□□□ 0.71
SDCCAG3-209ENST00000468963 DPY19L2Q6NUT2 758 aa19.46■□□□□ 0.71
SDCCAG3-209ENST00000468963 GTF2E1P29083 439 aaPredicted RBP19.45■□□□□ 0.7
SDCCAG3-209ENST00000468963 KIF6Q6ZMV9 814 aa19.45■□□□□ 0.7
SDCCAG3-209ENST00000468963 ZNF34Q8IZ26 560 aa19.45■□□□□ 0.7
SDCCAG3-209ENST00000468963 NYXQ9GZU5 481 aa19.45■□□□□ 0.7
SDCCAG3-209ENST00000468963 TNRC6CQ9HCJ0 1690 aaKnown RBP19.45■□□□□ 0.7
SDCCAG3-209ENST00000468963 DICER1Q9UPY3 1922 aaKnown RBP19.45■□□□□ 0.7
SDCCAG3-209ENST00000468963 NUP98P52948 1817 aa19.44■□□□□ 0.7
SDCCAG3-209ENST00000468963 ALDH1B1P30837 517 aa19.44■□□□□ 0.7
SDCCAG3-209ENST00000468963 LMOD3Q0VAK6 560 aa19.44■□□□□ 0.7
SDCCAG3-209ENST00000468963 NUTM1Q86Y26 1132 aa19.44■□□□□ 0.7
SDCCAG3-209ENST00000468963 CCDC146Q8IYE0 955 aa19.44■□□□□ 0.7
SDCCAG3-209ENST00000468963 SMC1BQ8NDV3 1235 aa19.44■□□□□ 0.7
SDCCAG3-209ENST00000468963 ZBTB3Q9H5J0 574 aa19.44■□□□□ 0.7
SDCCAG3-209ENST00000468963 CHL1O00533 1208 aa19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 EIF2S2P20042 333 aaKnown RBP19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 CRY2Q49AN0 593 aa19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 CCDC93Q567U6 631 aa19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 SUSD4Q5VX71 490 aa19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 GIGYF2Q6Y7W6 1299 aaKnown RBP19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 ADAMTS8Q9UP79 889 aa19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 TRIM35Q9UPQ4 493 aa19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 UBN2Q6ZU65 1347 aa19.43■□□□□ 0.7
SDCCAG3-209ENST00000468963 ARFGEF2Q9Y6D5 1785 aa19.42■□□□□ 0.7
SDCCAG3-209ENST00000468963 GPTP24298 496 aa19.42■□□□□ 0.7
SDCCAG3-209ENST00000468963 HTRA3P83110 453 aa19.42■□□□□ 0.7
SDCCAG3-209ENST00000468963 OLFM4Q6UX06 510 aa19.42■□□□□ 0.7
SDCCAG3-209ENST00000468963 RUNDC1Q96C34 613 aa19.42■□□□□ 0.7
SDCCAG3-209ENST00000468963 HOXA10P31260 410 aaPredicted RBP19.41■□□□□ 0.7
SDCCAG3-209ENST00000468963 FKBP4Q02790 459 aaKnown RBP eCLIP19.41■□□□□ 0.7
SDCCAG3-209ENST00000468963 NEUROD2Q15784 382 aa19.41■□□□□ 0.7
SDCCAG3-209ENST00000468963 PROSER3Q2NL68 480 aa19.41■□□□□ 0.7
SDCCAG3-209ENST00000468963 ABCC12Q96J65 1359 aa19.41■□□□□ 0.7
SDCCAG3-209ENST00000468963 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
SDCCAG3-209ENST00000468963 TIAM2Q8IVF5 1701 aa19.4■□□□□ 0.7
SDCCAG3-209ENST00000468963 DDNO94850 711 aaPredicted RBP19.4■□□□□ 0.7
SDCCAG3-209ENST00000468963 ANXA1P04083 346 aa19.4■□□□□ 0.7
SDCCAG3-209ENST00000468963 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
SDCCAG3-209ENST00000468963 WDR90Q96KV7 1748 aa19.39■□□□□ 0.7
SDCCAG3-209ENST00000468963 NTSR2O95665 410 aa19.39■□□□□ 0.69
SDCCAG3-209ENST00000468963 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
SDCCAG3-209ENST00000468963 PRKRIP1Q9H875 184 aaPredicted RBP19.39■□□□□ 0.69
SDCCAG3-209ENST00000468963 IBTKQ9P2D0 1353 aaPredicted RBP19.39■□□□□ 0.69
SDCCAG3-209ENST00000468963 SLC10A5Q5PT55 438 aa19.38■□□□□ 0.69
SDCCAG3-209ENST00000468963 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
SDCCAG3-209ENST00000468963 RIC1Q4ADV7 1423 aa19.37■□□□□ 0.69
SDCCAG3-209ENST00000468963 KRT24Q2M2I5 525 aa19.37■□□□□ 0.69
SDCCAG3-209ENST00000468963 PARP10Q53GL7 1025 aa19.37■□□□□ 0.69
SDCCAG3-209ENST00000468963 COPS6Q7L5N1 327 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms