RNA–Protein interactions for RNA: ENST00000468790.1

CASP7-208, Transcript of caspase 7, humanhuman

TSL 2

Gene CASP7, Length 607 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-208ENST00000468790 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
CASP7-208ENST00000468790 RCAN3Q9UKA8 241 aa12.72□□□□□ -0.37
CASP7-208ENST00000468790 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
CASP7-208ENST00000468790 BTAF1O14981 1849 aa12.72□□□□□ -0.37
CASP7-208ENST00000468790 BCL9O00512 1426 aa12.71□□□□□ -0.37
CASP7-208ENST00000468790 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.37
CASP7-208ENST00000468790 SOS1Q07889 1333 aaPredicted RBP12.71□□□□□ -0.37
CASP7-208ENST00000468790 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.37
CASP7-208ENST00000468790 EXOSC9Q06265 439 aaKnown RBP12.71□□□□□ -0.37
CASP7-208ENST00000468790 MARCH10Q8NA82 808 aaPredicted RBP12.71□□□□□ -0.37
CASP7-208ENST00000468790 ZNF428Q96B54 188 aa12.7□□□□□ -0.38
CASP7-208ENST00000468790 TJP1Q07157 1748 aa12.7□□□□□ -0.38
CASP7-208ENST00000468790 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
CASP7-208ENST00000468790 CABP4P57796 275 aa12.69□□□□□ -0.38
CASP7-208ENST00000468790 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
CASP7-208ENST00000468790 LY75O60449 1722 aa12.68□□□□□ -0.38
CASP7-208ENST00000468790 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
CASP7-208ENST00000468790 MSL1Q68DK7 614 aa12.68□□□□□ -0.38
CASP7-208ENST00000468790 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
CASP7-208ENST00000468790 HOXB7P09629 217 aa12.67□□□□□ -0.38
CASP7-208ENST00000468790 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
CASP7-208ENST00000468790 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
CASP7-208ENST00000468790 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
CASP7-208ENST00000468790 C9orf131Q5VYM1 1079 aa12.66□□□□□ -0.38
CASP7-208ENST00000468790 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
CASP7-208ENST00000468790 C8orf58Q8NAV2 365 aa12.66□□□□□ -0.38
CASP7-208ENST00000468790 NFATC2IPQ8NCF5 419 aa12.66□□□□□ -0.38
CASP7-208ENST00000468790 TMOD3Q9NYL9 352 aa12.66□□□□□ -0.38
CASP7-208ENST00000468790 MIS18AQ9NYP9 233 aa12.66□□□□□ -0.38
CASP7-208ENST00000468790 RANBP2P49792 3224 aaKnown RBP12.66□□□□□ -0.38
CASP7-208ENST00000468790 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
CASP7-208ENST00000468790 VAMP4O75379 141 aa12.65□□□□□ -0.38
CASP7-208ENST00000468790 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
CASP7-208ENST00000468790 EIF4A1P60842 406 aaKnown RBP12.65□□□□□ -0.38
CASP7-208ENST00000468790 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.38
CASP7-208ENST00000468790 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
CASP7-208ENST00000468790 TTC5Q8N0Z6 440 aa12.65□□□□□ -0.38
CASP7-208ENST00000468790 TSPYL6Q8N831 410 aa12.65□□□□□ -0.38
CASP7-208ENST00000468790 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
CASP7-208ENST00000468790 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
CASP7-208ENST00000468790 TRIOBPQ9H2D6 2365 aa12.65□□□□□ -0.38
CASP7-208ENST00000468790 BRCA2P51587 3418 aa12.65□□□□□ -0.39
CASP7-208ENST00000468790 RRP1P56182 461 aaKnown RBP12.64□□□□□ -0.39
CASP7-208ENST00000468790 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
CASP7-208ENST00000468790 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
CASP7-208ENST00000468790 KCNQ3O43525 872 aa12.63□□□□□ -0.39
CASP7-208ENST00000468790 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
CASP7-208ENST00000468790 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.63□□□□□ -0.39
CASP7-208ENST00000468790 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
CASP7-208ENST00000468790 SMC4Q9NTJ3 1288 aa12.63□□□□□ -0.39
CASP7-208ENST00000468790 NEFLP07196 543 aa12.62□□□□□ -0.39
CASP7-208ENST00000468790 BRPF1P55201 1214 aaPredicted RBP12.62□□□□□ -0.39
CASP7-208ENST00000468790 SLC39A6Q13433 755 aa12.62□□□□□ -0.39
CASP7-208ENST00000468790 PIGBQ92521 554 aa12.62□□□□□ -0.39
CASP7-208ENST00000468790 FMNL2Q96PY5 1086 aa12.62□□□□□ -0.39
CASP7-208ENST00000468790 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
CASP7-208ENST00000468790 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
CASP7-208ENST00000468790 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
CASP7-208ENST00000468790 CASP8AP2Q9UKL3 1982 aa12.61□□□□□ -0.39
CASP7-208ENST00000468790 BCAR3O75815 825 aa12.6□□□□□ -0.39
CASP7-208ENST00000468790 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
CASP7-208ENST00000468790 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
CASP7-208ENST00000468790 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
CASP7-208ENST00000468790 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
CASP7-208ENST00000468790 TFCP2L1Q9NZI6 479 aa12.6□□□□□ -0.39
CASP7-208ENST00000468790 ARFGEF2Q9Y6D5 1785 aa12.6□□□□□ -0.39
CASP7-208ENST00000468790 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
CASP7-208ENST00000468790 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
CASP7-208ENST00000468790 HDGFL1Q5TGJ6 251 aa12.59□□□□□ -0.39
CASP7-208ENST00000468790 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
CASP7-208ENST00000468790 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
CASP7-208ENST00000468790 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
CASP7-208ENST00000468790 SYTL4Q96C24 671 aaPredicted RBP12.59□□□□□ -0.39
CASP7-208ENST00000468790 ACSBG1Q96GR2 724 aa12.59□□□□□ -0.39
CASP7-208ENST00000468790 BCL2L13Q9BXK5 485 aa12.59□□□□□ -0.39
CASP7-208ENST00000468790 STK31Q9BXU1 1019 aa12.59□□□□□ -0.39
CASP7-208ENST00000468790 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
CASP7-208ENST00000468790 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
CASP7-208ENST00000468790 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
CASP7-208ENST00000468790 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
CASP7-208ENST00000468790 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
CASP7-208ENST00000468790 ERBB4Q15303 1308 aa12.58□□□□□ -0.4
CASP7-208ENST00000468790 ANKRD36CQ5JPF3 1778 aa12.57□□□□□ -0.4
CASP7-208ENST00000468790 DGKZQ13574 1117 aa12.57□□□□□ -0.4
CASP7-208ENST00000468790 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
CASP7-208ENST00000468790 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
CASP7-208ENST00000468790 PTPRCP08575 1304 aa12.57□□□□□ -0.4
CASP7-208ENST00000468790 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
CASP7-208ENST00000468790 BCORQ6W2J9 1755 aa12.56□□□□□ -0.4
CASP7-208ENST00000468790 AFDNP55196 1824 aaKnown RBP12.56□□□□□ -0.4
CASP7-208ENST00000468790 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
CASP7-208ENST00000468790 MS4A1P11836 297 aa12.56□□□□□ -0.4
CASP7-208ENST00000468790 KCNQ4P56696 695 aa12.56□□□□□ -0.4
CASP7-208ENST00000468790 MAP2K1Q02750 393 aaPredicted RBP12.56□□□□□ -0.4
CASP7-208ENST00000468790 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
CASP7-208ENST00000468790 ARHGAP45Q92619 1136 aa12.56□□□□□ -0.4
CASP7-208ENST00000468790 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
CASP7-208ENST00000468790 PDE3AQ14432 1141 aa12.55□□□□□ -0.4
CASP7-208ENST00000468790 ATF7IPQ6VMQ6 1270 aa12.55□□□□□ -0.4
CASP7-208ENST00000468790 FRAT1Q92837 279 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms