RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 STYK1Q6J9G0 422 aa24.01■■□□□ 1.43
COPS6-206ENST00000468499 PIP4K2AP48426 406 aaPredicted RBP24■■□□□ 1.43
COPS6-206ENST00000468499 CNBD1Q8NA66 436 aa24■■□□□ 1.43
COPS6-206ENST00000468499 L3MBTL3Q96JM7 780 aaPredicted RBP23.99■■□□□ 1.43
COPS6-206ENST00000468499 ZNF541Q9H0D2 1346 aa23.99■■□□□ 1.43
COPS6-206ENST00000468499 PRAMEF22A3QJZ6 481 aa23.98■■□□□ 1.43
COPS6-206ENST00000468499 OLFM4Q6UX06 510 aa23.98■■□□□ 1.43
COPS6-206ENST00000468499 CNKSR1Q969H4 720 aa23.98■■□□□ 1.43
COPS6-206ENST00000468499 TAF1DQ9H5J8 278 aaPredicted RBP23.98■■□□□ 1.43
COPS6-206ENST00000468499 ITGBL1O95965 494 aaPredicted RBP23.97■■□□□ 1.43
COPS6-206ENST00000468499 SNED1Q8TER0 1413 aa23.97■■□□□ 1.43
COPS6-206ENST00000468499 GNAT3A8MTJ3 354 aa23.96■■□□□ 1.43
COPS6-206ENST00000468499 CC2D1BQ5T0F9 858 aaKnown RBP23.96■■□□□ 1.43
COPS6-206ENST00000468499 MASTLQ96GX5 879 aa23.96■■□□□ 1.43
COPS6-206ENST00000468499 SETDB2Q96T68 719 aa23.96■■□□□ 1.43
COPS6-206ENST00000468499 PCGF6Q9BYE7 350 aa23.96■■□□□ 1.43
COPS6-206ENST00000468499 USP16Q9Y5T5 823 aa23.96■■□□□ 1.43
COPS6-206ENST00000468499 COL4A5P29400 1685 aa23.95■■□□□ 1.43
COPS6-206ENST00000468499 TEFQ10587 303 aa23.95■■□□□ 1.42
COPS6-206ENST00000468499 LDHDQ86WU2 507 aa23.95■■□□□ 1.42
COPS6-206ENST00000468499 TEX13AQ9BXU3 409 aaPredicted RBP23.95■■□□□ 1.42
COPS6-206ENST00000468499 LTBP1Q14766 1721 aa23.95■■□□□ 1.42
COPS6-206ENST00000468499 VEGFBP49765 207 aa23.94■■□□□ 1.42
COPS6-206ENST00000468499 DZIP3Q86Y13 1208 aaKnown RBP23.94■■□□□ 1.42
COPS6-206ENST00000468499 FMNL2Q96PY5 1086 aa23.94■■□□□ 1.42
COPS6-206ENST00000468499 KLRG2A4D1S0 409 aaPredicted RBP23.93■■□□□ 1.42
COPS6-206ENST00000468499 ST5P78524 1137 aa23.93■■□□□ 1.42
COPS6-206ENST00000468499 PHACTR3Q96KR7 559 aa23.93■■□□□ 1.42
COPS6-206ENST00000468499 GAS2L2Q8NHY3 880 aa23.92■■□□□ 1.42
COPS6-206ENST00000468499 PRDM10Q9NQV6 1147 aa23.92■■□□□ 1.42
COPS6-206ENST00000468499 ZNF277Q9NRM2 450 aaPredicted RBP23.92■■□□□ 1.42
COPS6-206ENST00000468499 IQCA1LA6NCM1 817 aa23.9■■□□□ 1.42
COPS6-206ENST00000468499 SOGA3Q5TF21 947 aa23.9■■□□□ 1.42
COPS6-206ENST00000468499 THSD7BQ9C0I4 1608 aa23.9■■□□□ 1.42
COPS6-206ENST00000468499 NBPF26B4DH59 902 aa23.89■■□□□ 1.41
COPS6-206ENST00000468499 U2SURPO15042 1029 aaKnown RBP23.89■■□□□ 1.41
COPS6-206ENST00000468499 FKBP4Q02790 459 aaKnown RBP eCLIP23.89■■□□□ 1.41
COPS6-206ENST00000468499 CCDC93Q567U6 631 aa23.89■■□□□ 1.41
COPS6-206ENST00000468499 NBPF10Q6P3W6 841 aaKnown RBP23.89■■□□□ 1.41
COPS6-206ENST00000468499 NBPF15Q8N660 670 aa23.89■■□□□ 1.41
COPS6-206ENST00000468499 WBP1LQ9NX94 342 aa23.89■■□□□ 1.41
COPS6-206ENST00000468499 TMEM88BA6NKF7 163 aa23.88■■□□□ 1.41
COPS6-206ENST00000468499 BTBD11A6QL63 1104 aa23.88■■□□□ 1.41
COPS6-206ENST00000468499 SLC51AQ86UW1 340 aa23.88■■□□□ 1.41
COPS6-206ENST00000468499 NBPF5PQ86XG9 351 aaPredicted RBP23.88■■□□□ 1.41
COPS6-206ENST00000468499 NPR1P16066 1061 aa23.87■■□□□ 1.41
COPS6-206ENST00000468499 RSPH6AQ9H0K4 717 aa23.87■■□□□ 1.41
COPS6-206ENST00000468499 LAMB4A4D0S4 1761 aa23.87■■□□□ 1.41
COPS6-206ENST00000468499 RNF123Q5XPI4 1314 aa23.86■■□□□ 1.41
COPS6-206ENST00000468499 EAPPQ56P03 285 aaPredicted RBP23.86■■□□□ 1.41
COPS6-206ENST00000468499 CLEC4GQ6UXB4 293 aa23.86■■□□□ 1.41
COPS6-206ENST00000468499 NPC1L1Q9UHC9 1359 aa23.86■■□□□ 1.41
COPS6-206ENST00000468499 FZD9O00144 591 aa23.85■■□□□ 1.41
COPS6-206ENST00000468499 NPHP1O15259 732 aa23.85■■□□□ 1.41
COPS6-206ENST00000468499 EPHX2P34913 555 aa23.85■■□□□ 1.41
COPS6-206ENST00000468499 CTCFP49711 727 aaPredicted RBP23.85■■□□□ 1.41
COPS6-206ENST00000468499 HACL1Q9UJ83 578 aa23.85■■□□□ 1.41
COPS6-206ENST00000468499 ABCC12Q96J65 1359 aa23.84■■□□□ 1.41
COPS6-206ENST00000468499 RASSF10A6NK89 507 aa23.84■■□□□ 1.41
COPS6-206ENST00000468499 PRKAR2BP31323 418 aa23.84■■□□□ 1.41
COPS6-206ENST00000468499 LBX1P52954 281 aa23.84■■□□□ 1.41
COPS6-206ENST00000468499 HLFQ16534 295 aa23.84■■□□□ 1.41
COPS6-206ENST00000468499 MAP1SQ66K74 1059 aaPredicted RBP23.84■■□□□ 1.41
COPS6-206ENST00000468499 HSPA8P11142 646 aaKnown RBP23.83■■□□□ 1.41
COPS6-206ENST00000468499 NUP98P52948 1817 aa23.82■■□□□ 1.4
COPS6-206ENST00000468499 FMR1Q06787 632 aaKnown RBP eCLIP23.82■■□□□ 1.4
COPS6-206ENST00000468499 IARSP41252 1262 aaKnown RBP23.81■■□□□ 1.4
COPS6-206ENST00000468499 CNGB1Q14028 1251 aaPredicted RBP23.81■■□□□ 1.4
COPS6-206ENST00000468499 MCM10Q7L590 875 aa23.81■■□□□ 1.4
COPS6-206ENST00000468499 CNTROBQ8N137 903 aa23.81■■□□□ 1.4
COPS6-206ENST00000468499 NIP7Q9Y221 180 aaKnown RBP eCLIP23.81■■□□□ 1.4
COPS6-206ENST00000468499 FAM177BA6PVY3 158 aa23.8■■□□□ 1.4
COPS6-206ENST00000468499 SYNE4Q8N205 404 aa23.8■■□□□ 1.4
COPS6-206ENST00000468499 KDM3BQ7LBC6 1761 aa23.79■■□□□ 1.4
COPS6-206ENST00000468499 SNRPA1P09661 255 aaKnown RBP23.79■■□□□ 1.4
COPS6-206ENST00000468499 DCTN1Q14203 1278 aa23.79■■□□□ 1.4
COPS6-206ENST00000468499 CLEC11AQ9Y240 323 aa23.79■■□□□ 1.4
COPS6-206ENST00000468499 CRY2Q49AN0 593 aa23.78■■□□□ 1.4
COPS6-206ENST00000468499 TPTE2Q6XPS3 522 aa23.78■■□□□ 1.4
COPS6-206ENST00000468499 NPM2Q86SE8 214 aaKnown RBP23.78■■□□□ 1.4
COPS6-206ENST00000468499 RTKN2Q8IZC4 609 aa23.78■■□□□ 1.4
COPS6-206ENST00000468499 AIDAQ96BJ3 306 aa23.78■■□□□ 1.4
COPS6-206ENST00000468499 RGL2O15211 777 aa23.77■■□□□ 1.4
COPS6-206ENST00000468499 DEFB115Q30KQ5 88 aa23.77■■□□□ 1.4
COPS6-206ENST00000468499 GPC2Q8N158 579 aa23.77■■□□□ 1.4
COPS6-206ENST00000468499 ZNF652Q9Y2D9 606 aa23.77■■□□□ 1.4
COPS6-206ENST00000468499 WDR33Q9C0J8 1336 aaKnown RBP23.77■■□□□ 1.4
COPS6-206ENST00000468499 TRPM7Q96QT4 1865 aa23.77■■□□□ 1.4
COPS6-206ENST00000468499 ABHD8Q96I13 439 aa23.76■■□□□ 1.39
COPS6-206ENST00000468499 PSMD1Q99460 953 aa23.76■■□□□ 1.39
COPS6-206ENST00000468499 DLG5Q8TDM6 1919 aa23.76■■□□□ 1.39
COPS6-206ENST00000468499 SCNN1DP51172 638 aa23.75■■□□□ 1.39
COPS6-206ENST00000468499 PNMA8AQ86V59 439 aaPredicted RBP23.75■■□□□ 1.39
COPS6-206ENST00000468499 NUTM1Q86Y26 1132 aa23.75■■□□□ 1.39
COPS6-206ENST00000468499 DDX21Q9NR30 783 aaKnown RBP eCLIP23.74■■□□□ 1.39
COPS6-206ENST00000468499 RIC1Q4ADV7 1423 aa23.74■■□□□ 1.39
COPS6-206ENST00000468499 SLC34A2O95436 690 aa23.72■■□□□ 1.39
COPS6-206ENST00000468499 ALDH1B1P30837 517 aa23.72■■□□□ 1.39
COPS6-206ENST00000468499 EPS15P42566 896 aa23.72■■□□□ 1.39
COPS6-206ENST00000468499 UBN2Q6ZU65 1347 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms