RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 C1orf141Q5JVX7 400 aa19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 WDR33Q9C0J8 1336 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-211ENST00000468468 BTBD11A6QL63 1104 aa19.05■□□□□ 0.64
TSPAN4-211ENST00000468468 CADPS2Q86UW7 1296 aa19.05■□□□□ 0.64
TSPAN4-211ENST00000468468 GDPD2Q9HCC8 539 aa19.05■□□□□ 0.64
TSPAN4-211ENST00000468468 NOL7Q9UMY1 257 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-211ENST00000468468 SNX14Q9Y5W7 946 aa19.05■□□□□ 0.64
TSPAN4-211ENST00000468468 RNMTO43148 476 aaKnown RBP19.05■□□□□ 0.64
TSPAN4-211ENST00000468468 RNF214Q8ND24 703 aa19.05■□□□□ 0.64
TSPAN4-211ENST00000468468 OFD1O75665 1012 aa19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 ANXA1P04083 346 aa19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 SYAP1Q96A49 352 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 DCCP43146 1447 aa19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 HOXB7P09629 217 aa19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 KIAA1211Q6ZU35 1233 aa19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 LSG1Q9H089 658 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 LMO7Q8WWI1 1683 aa19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 HSP90AB4PQ58FF6 505 aa19.04■□□□□ 0.64
TSPAN4-211ENST00000468468 GADD45BO75293 160 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-211ENST00000468468 TPM2P07951 284 aa19.03■□□□□ 0.64
TSPAN4-211ENST00000468468 CWC27Q6UX04 472 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-211ENST00000468468 USP48Q86UV5 1035 aa19.03■□□□□ 0.64
TSPAN4-211ENST00000468468 CHMP4AQ9BY43 222 aa19.03■□□□□ 0.64
TSPAN4-211ENST00000468468 OS9Q13438 667 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-211ENST00000468468 TSPY26PQ9H489 355 aa19.03■□□□□ 0.64
TSPAN4-211ENST00000468468 NLRP2Q9NX02 1062 aa19.03■□□□□ 0.64
TSPAN4-211ENST00000468468 NPHP3Q7Z494 1330 aa19.02■□□□□ 0.64
TSPAN4-211ENST00000468468 CHRNA2Q15822 529 aa19.02■□□□□ 0.64
TSPAN4-211ENST00000468468 RASEFQ8IZ41 740 aa19.02■□□□□ 0.64
TSPAN4-211ENST00000468468 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.02■□□□□ 0.63
TSPAN4-211ENST00000468468 TTC14Q96N46 770 aa19.02■□□□□ 0.63
TSPAN4-211ENST00000468468 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.02■□□□□ 0.63
TSPAN4-211ENST00000468468 AK2P54819 239 aa19.01■□□□□ 0.63
TSPAN4-211ENST00000468468 LARP6Q9BRS8 491 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-211ENST00000468468 SPG7Q9UQ90 795 aa19.01■□□□□ 0.63
TSPAN4-211ENST00000468468 KDM3BQ7LBC6 1761 aa19■□□□□ 0.63
TSPAN4-211ENST00000468468 RPAP1Q9BWH6 1393 aaPredicted RBP19■□□□□ 0.63
TSPAN4-211ENST00000468468 CAMTA1Q9Y6Y1 1673 aa19■□□□□ 0.63
TSPAN4-211ENST00000468468 LIMCH1Q9UPQ0 1083 aa19■□□□□ 0.63
TSPAN4-211ENST00000468468 ADCY9O60503 1353 aa19■□□□□ 0.63
TSPAN4-211ENST00000468468 ZNF500O60304 480 aaPredicted RBP18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 GLRX3O76003 335 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 TTC41PQ6P2S7 1318 aa18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 RUFY3Q7L099 469 aa18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 DIAPH3Q9NSV4 1193 aa18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 CCDC39Q9UFE4 941 aa18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 ZKSCAN5Q9Y2L8 839 aa18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 USP42Q9H9J4 1324 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 TNS3Q68CZ2 1445 aa18.99■□□□□ 0.63
TSPAN4-211ENST00000468468 PHF14O94880 888 aa18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 CLASRPQ8N2M8 674 aaKnown RBP18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 PRDM4Q9UKN5 801 aa18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 CSB-PGBD3P0DP91 1061 aa18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 RAPGEF4Q8WZA2 1011 aa18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 PRAMEF22A3QJZ6 481 aa18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 ZSCAN22P10073 491 aaPredicted RBP18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 C9orf78Q9NZ63 289 aaPredicted RBP18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 DBF4Q9UBU7 674 aaPredicted RBP18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.98■□□□□ 0.63
TSPAN4-211ENST00000468468 SPATA31A3Q5VYP0 1347 aa18.97■□□□□ 0.63
TSPAN4-211ENST00000468468 CPA1P15085 419 aa18.97■□□□□ 0.63
TSPAN4-211ENST00000468468 CASTP20810 708 aaKnown RBP18.97■□□□□ 0.63
TSPAN4-211ENST00000468468 RUFY2Q8WXA3 655 aa18.97■□□□□ 0.63
TSPAN4-211ENST00000468468 CNPY2Q9Y2B0 182 aa18.97■□□□□ 0.63
TSPAN4-211ENST00000468468 MTX1Q13505 466 aa18.97■□□□□ 0.63
TSPAN4-211ENST00000468468 SMC3Q9UQE7 1217 aa18.97■□□□□ 0.63
TSPAN4-211ENST00000468468 MAP3K2Q9Y2U5 619 aa18.97■□□□□ 0.63
TSPAN4-211ENST00000468468 STX6O43752 255 aa18.96■□□□□ 0.63
TSPAN4-211ENST00000468468 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
TSPAN4-211ENST00000468468 TMEM87AQ8NBN3 555 aa18.96■□□□□ 0.63
TSPAN4-211ENST00000468468 KDM4FA0A1W2PPD8 638 aa18.96■□□□□ 0.63
TSPAN4-211ENST00000468468 SYT1P21579 422 aa18.96■□□□□ 0.63
TSPAN4-211ENST00000468468 MCM5P33992 734 aa18.95■□□□□ 0.62
TSPAN4-211ENST00000468468 PTH1RQ03431 593 aa18.95■□□□□ 0.62
TSPAN4-211ENST00000468468 TPRNQ4KMQ1 711 aa18.95■□□□□ 0.62
TSPAN4-211ENST00000468468 ECHDC1Q9NTX5 307 aa18.95■□□□□ 0.62
TSPAN4-211ENST00000468468 PA2G4Q9UQ80 394 aaKnown RBP18.95■□□□□ 0.62
TSPAN4-211ENST00000468468 GIGYF1O75420 1035 aaPredicted RBP18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 ALDH1L1O75891 902 aa18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 IFIT2P09913 472 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 GPATCH3Q96I76 525 aa18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 R3HCC1Q9Y3T6 440 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 MEGF6O75095 1541 aa18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 XIRP1Q702N8 1843 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 ZNF335Q9H4Z2 1342 aaPredicted RBP18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 PROSER3Q2NL68 480 aa18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
TSPAN4-211ENST00000468468 LARGE1O95461 756 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 KSR2Q6VAB6 950 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 JAKMIP1Q96N16 626 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 HYPKQ9NX55 129 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 OVOS2A0A0G2JMS6 1433 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 COL18A1P39060 1754 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 F13A1P00488 732 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 PTMAP06454 111 aaKnown RBP18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 SLC39A6Q13433 755 aa18.93■□□□□ 0.62
TSPAN4-211ENST00000468468 CWF19L2Q2TBE0 894 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms