RNA–Protein interactions for RNA: ENST00000468318.5

CNIH4-206, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 2

Gene CNIH4, Length 1,525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-206ENST00000468318 LRP10Q7Z4F1 713 aa23.49■■□□□ 1.35
CNIH4-206ENST00000468318 ANKRD31Q8N7Z5 1873 aa23.49■■□□□ 1.35
CNIH4-206ENST00000468318 AIMP1Q12904 312 aaKnown RBP23.49■■□□□ 1.35
CNIH4-206ENST00000468318 KLHL34Q8N239 644 aa23.49■■□□□ 1.35
CNIH4-206ENST00000468318 DDX21Q9NR30 783 aaKnown RBP eCLIP23.49■■□□□ 1.35
CNIH4-206ENST00000468318 KIAA1551Q9HCM1 1747 aa23.48■■□□□ 1.35
CNIH4-206ENST00000468318 CACNA1SQ13698 1873 aa23.48■■□□□ 1.35
CNIH4-206ENST00000468318 BICDL1Q6ZP65 573 aa23.48■■□□□ 1.35
CNIH4-206ENST00000468318 ZBTB3Q9H5J0 574 aa23.48■■□□□ 1.35
CNIH4-206ENST00000468318 KIF6Q6ZMV9 814 aa23.47■■□□□ 1.35
CNIH4-206ENST00000468318 XAGE3Q8WTP9 111 aa23.47■■□□□ 1.35
CNIH4-206ENST00000468318 DBF4Q9UBU7 674 aaPredicted RBP23.47■■□□□ 1.35
CNIH4-206ENST00000468318 NLGN1Q8N2Q7 840 aa23.46■■□□□ 1.35
CNIH4-206ENST00000468318 DDR1Q08345 913 aa23.45■■□□□ 1.34
CNIH4-206ENST00000468318 HLFQ16534 295 aa23.45■■□□□ 1.34
CNIH4-206ENST00000468318 CCDC30Q5VVM6 783 aa23.45■■□□□ 1.34
CNIH4-206ENST00000468318 TBC1D9BQ66K14 1250 aa23.45■■□□□ 1.34
CNIH4-206ENST00000468318 ZBED9Q6R2W3 1325 aa23.44■■□□□ 1.34
CNIH4-206ENST00000468318 MAP3K15Q6ZN16 1313 aa23.44■■□□□ 1.34
CNIH4-206ENST00000468318 COPS6Q7L5N1 327 aa23.44■■□□□ 1.34
CNIH4-206ENST00000468318 VAMP4O75379 141 aa23.43■■□□□ 1.34
CNIH4-206ENST00000468318 NFIXQ14938 502 aa23.43■■□□□ 1.34
CNIH4-206ENST00000468318 PHAXQ9H814 394 aaKnown RBP23.43■■□□□ 1.34
CNIH4-206ENST00000468318 COL11A2P13942 1736 aaPredicted RBP23.42■■□□□ 1.34
CNIH4-206ENST00000468318 STK31Q9BXU1 1019 aa23.42■■□□□ 1.34
CNIH4-206ENST00000468318 PARP3Q9Y6F1 533 aa23.42■■□□□ 1.34
CNIH4-206ENST00000468318 BRCA1P38398 1863 aaKnown RBP23.42■■□□□ 1.34
CNIH4-206ENST00000468318 TRMT2AQ8IZ69 625 aaKnown RBP23.41■■□□□ 1.34
CNIH4-206ENST00000468318 FHDC1Q9C0D6 1143 aaPredicted RBP23.41■■□□□ 1.34
CNIH4-206ENST00000468318 HYPKQ9NX55 129 aa23.41■■□□□ 1.34
CNIH4-206ENST00000468318 DLEC1Q9Y238 1755 aa23.41■■□□□ 1.34
CNIH4-206ENST00000468318 POLRMTO00411 1230 aaKnown RBP23.4■■□□□ 1.34
CNIH4-206ENST00000468318 TM4SF1P30408 202 aa23.4■■□□□ 1.34
CNIH4-206ENST00000468318 YTHDC1Q96MU7 727 aaKnown RBP23.4■■□□□ 1.34
CNIH4-206ENST00000468318 ZNF652Q9Y2D9 606 aa23.4■■□□□ 1.34
CNIH4-206ENST00000468318 LAMB2P55268 1798 aa23.4■■□□□ 1.34
CNIH4-206ENST00000468318 TNRC6CQ9HCJ0 1690 aaKnown RBP23.39■■□□□ 1.34
CNIH4-206ENST00000468318 GPTP24298 496 aa23.38■■□□□ 1.33
CNIH4-206ENST00000468318 G2E3Q7L622 706 aa23.38■■□□□ 1.33
CNIH4-206ENST00000468318 C10orf71Q711Q0 1435 aa23.38■■□□□ 1.33
CNIH4-206ENST00000468318 CARMIL3Q8ND23 1372 aa23.38■■□□□ 1.33
CNIH4-206ENST00000468318 ATP10DQ9P241 1426 aa23.38■■□□□ 1.33
CNIH4-206ENST00000468318 FAM177BA6PVY3 158 aa23.38■■□□□ 1.33
CNIH4-206ENST00000468318 NIP7Q9Y221 180 aaKnown RBP eCLIP23.38■■□□□ 1.33
CNIH4-206ENST00000468318 ERVV-1B6SEH8 477 aa23.37■■□□□ 1.33
CNIH4-206ENST00000468318 SLC4A2P04920 1241 aa23.37■■□□□ 1.33
CNIH4-206ENST00000468318 ZNF428Q96B54 188 aa23.37■■□□□ 1.33
CNIH4-206ENST00000468318 CCDC24Q8N4L8 307 aa23.36■■□□□ 1.33
CNIH4-206ENST00000468318 SETDB2Q96T68 719 aa23.36■■□□□ 1.33
CNIH4-206ENST00000468318 DDX60Q8IY21 1712 aaKnown RBP23.36■■□□□ 1.33
CNIH4-206ENST00000468318 SERPINB2P05120 415 aa23.35■■□□□ 1.33
CNIH4-206ENST00000468318 CLEC4GQ6UXB4 293 aa23.35■■□□□ 1.33
CNIH4-206ENST00000468318 GIGYF2Q6Y7W6 1299 aaKnown RBP23.35■■□□□ 1.33
CNIH4-206ENST00000468318 BCL2L13Q9BXK5 485 aa23.35■■□□□ 1.33
CNIH4-206ENST00000468318 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
CNIH4-206ENST00000468318 UBN2Q6ZU65 1347 aa23.35■■□□□ 1.33
CNIH4-206ENST00000468318 NLGN2Q8NFZ4 835 aa23.34■■□□□ 1.33
CNIH4-206ENST00000468318 ANKRD13DQ6ZTN6 518 aa23.33■■□□□ 1.33
CNIH4-206ENST00000468318 PLBD2Q8NHP8 589 aa23.33■■□□□ 1.33
CNIH4-206ENST00000468318 ADCY9O60503 1353 aa23.33■■□□□ 1.32
CNIH4-206ENST00000468318 RIC3Q7Z5B4 369 aa23.33■■□□□ 1.32
CNIH4-206ENST00000468318 MYH3P11055 1940 aa23.32■■□□□ 1.32
CNIH4-206ENST00000468318 NPHP1O15259 732 aa23.32■■□□□ 1.32
CNIH4-206ENST00000468318 FLIIQ13045 1269 aa23.32■■□□□ 1.32
CNIH4-206ENST00000468318 SYT17Q9BSW7 474 aa23.32■■□□□ 1.32
CNIH4-206ENST00000468318 PXDNLA1KZ92 1463 aa23.31■■□□□ 1.32
CNIH4-206ENST00000468318 FKBP5Q13451 457 aaPredicted RBP23.3■■□□□ 1.32
CNIH4-206ENST00000468318 PRR5LQ6MZQ0 368 aa23.3■■□□□ 1.32
CNIH4-206ENST00000468318 NBPF5PQ86XG9 351 aaPredicted RBP23.3■■□□□ 1.32
CNIH4-206ENST00000468318 CNBD1Q8NA66 436 aa23.3■■□□□ 1.32
CNIH4-206ENST00000468318 SSH1Q8WYL5 1049 aa23.3■■□□□ 1.32
CNIH4-206ENST00000468318 WWC3Q9ULE0 1092 aa23.3■■□□□ 1.32
CNIH4-206ENST00000468318 ATP5J2-PTCD1G3V325 749 aa23.29■■□□□ 1.32
CNIH4-206ENST00000468318 RGL2O15211 777 aa23.29■■□□□ 1.32
CNIH4-206ENST00000468318 ZNF34Q8IZ26 560 aa23.29■■□□□ 1.32
CNIH4-206ENST00000468318 MAP3K2Q9Y2U5 619 aa23.29■■□□□ 1.32
CNIH4-206ENST00000468318 TAF1P21675 1872 aa23.29■■□□□ 1.32
CNIH4-206ENST00000468318 PI4KAP2A4QPH2 592 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 DDX58O95786 925 aaKnown RBP23.28■■□□□ 1.32
CNIH4-206ENST00000468318 PI4KAP1Q8N8J0 262 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 MYD88Q99836 296 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 ABCC12Q96J65 1359 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 GOLGB1Q14789 3259 aaKnown RBP23.28■■□□□ 1.32
CNIH4-206ENST00000468318 ARFGEF1Q9Y6D6 1849 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 TCIRG1Q13488 830 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 SUSD4Q5VX71 490 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 NUTM1Q86Y26 1132 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 MRPL50Q8N5N7 158 aaKnown RBP23.28■■□□□ 1.32
CNIH4-206ENST00000468318 SMC4Q9NTJ3 1288 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 CD2APQ9Y5K6 639 aa23.28■■□□□ 1.32
CNIH4-206ENST00000468318 HSP90AB3PQ58FF7 597 aa23.27■■□□□ 1.32
CNIH4-206ENST00000468318 KSR2Q6VAB6 950 aa23.26■■□□□ 1.31
CNIH4-206ENST00000468318 SPEF2Q9C093 1822 aa23.25■■□□□ 1.31
CNIH4-206ENST00000468318 NLRP10Q86W26 655 aa23.25■■□□□ 1.31
CNIH4-206ENST00000468318 F6X3S4 739 aa23.24■■□□□ 1.31
CNIH4-206ENST00000468318 NTSR2O95665 410 aa23.24■■□□□ 1.31
CNIH4-206ENST00000468318 ST5P78524 1137 aa23.24■■□□□ 1.31
CNIH4-206ENST00000468318 IBTKQ9P2D0 1353 aaPredicted RBP23.23■■□□□ 1.31
CNIH4-206ENST00000468318 CT47B1P0C2W7 299 aaPredicted RBP23.23■■□□□ 1.31
CNIH4-206ENST00000468318 GTF2E1P29083 439 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms