RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
C9orf3-212ENST00000468164 CCDC146Q8IYE0 955 aa17.71■□□□□ 0.43
C9orf3-212ENST00000468164 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
C9orf3-212ENST00000468164 ZNF652Q9Y2D9 606 aa17.71■□□□□ 0.43
C9orf3-212ENST00000468164 MYBBP1AQ9BQG0 1328 aaKnown RBP17.71■□□□□ 0.42
C9orf3-212ENST00000468164 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.42
C9orf3-212ENST00000468164 RIPK4P57078 832 aa17.7■□□□□ 0.42
C9orf3-212ENST00000468164 NBPF5PQ86XG9 351 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-212ENST00000468164 BRIP1Q9BX63 1249 aa17.7■□□□□ 0.42
C9orf3-212ENST00000468164 NMRK2Q9NPI5 230 aa17.7■□□□□ 0.42
C9orf3-212ENST00000468164 RRP7AQ9Y3A4 280 aaKnown RBP17.7■□□□□ 0.42
C9orf3-212ENST00000468164 KIF3CO14782 793 aa17.69■□□□□ 0.42
C9orf3-212ENST00000468164 NEUROD2Q15784 382 aa17.69■□□□□ 0.42
C9orf3-212ENST00000468164 MYL6BP14649 208 aa17.68■□□□□ 0.42
C9orf3-212ENST00000468164 EIF4A1P60842 406 aaKnown RBP17.68■□□□□ 0.42
C9orf3-212ENST00000468164 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
C9orf3-212ENST00000468164 NIP7Q9Y221 180 aaKnown RBP eCLIP17.68■□□□□ 0.42
C9orf3-212ENST00000468164 WDR43Q15061 677 aaKnown RBP eCLIP17.67■□□□□ 0.42
C9orf3-212ENST00000468164 C21orf2O43822 256 aa17.66■□□□□ 0.42
C9orf3-212ENST00000468164 HLFQ16534 295 aa17.66■□□□□ 0.42
C9orf3-212ENST00000468164 CLEC4GQ6UXB4 293 aa17.66■□□□□ 0.42
C9orf3-212ENST00000468164 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
C9orf3-212ENST00000468164 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-212ENST00000468164 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
C9orf3-212ENST00000468164 C16orf71Q8IYS4 520 aaPredicted RBP17.65■□□□□ 0.42
C9orf3-212ENST00000468164 KDM2BQ8NHM5 1336 aa17.65■□□□□ 0.42
C9orf3-212ENST00000468164 LMNB1P20700 586 aa17.64■□□□□ 0.41
C9orf3-212ENST00000468164 LMOD3Q0VAK6 560 aa17.64■□□□□ 0.41
C9orf3-212ENST00000468164 KIF6Q6ZMV9 814 aa17.64■□□□□ 0.41
C9orf3-212ENST00000468164 LAS1LQ9Y4W2 734 aaKnown RBP17.64■□□□□ 0.41
C9orf3-212ENST00000468164 ANKRD36CQ5JPF3 1778 aa17.63■□□□□ 0.41
C9orf3-212ENST00000468164 HSPA6P17066 643 aa17.63■□□□□ 0.41
C9orf3-212ENST00000468164 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
C9orf3-212ENST00000468164 TPTE2Q6XPS3 522 aa17.63■□□□□ 0.41
C9orf3-212ENST00000468164 TTLL7Q6ZT98 887 aa17.63■□□□□ 0.41
C9orf3-212ENST00000468164 ZBTB3Q9H5J0 574 aa17.63■□□□□ 0.41
C9orf3-212ENST00000468164 RRAGCQ9HB90 399 aa17.63■□□□□ 0.41
C9orf3-212ENST00000468164 NFKBIEO00221 500 aa17.62■□□□□ 0.41
C9orf3-212ENST00000468164 TOMM70O94826 608 aa17.62■□□□□ 0.41
C9orf3-212ENST00000468164 SRGNP10124 158 aa17.62■□□□□ 0.41
C9orf3-212ENST00000468164 PRELPP51888 382 aa17.62■□□□□ 0.41
C9orf3-212ENST00000468164 PRPF40BQ6NWY9 871 aaKnown RBP17.62■□□□□ 0.41
C9orf3-212ENST00000468164 NECTIN2Q92692 538 aa17.62■□□□□ 0.41
C9orf3-212ENST00000468164 CNKSR1Q969H4 720 aa17.62■□□□□ 0.41
C9orf3-212ENST00000468164 MASTLQ96GX5 879 aa17.62■□□□□ 0.41
C9orf3-212ENST00000468164 GPTP24298 496 aa17.61■□□□□ 0.41
C9orf3-212ENST00000468164 STYK1Q6J9G0 422 aa17.61■□□□□ 0.41
C9orf3-212ENST00000468164 RUNDC1Q96C34 613 aa17.61■□□□□ 0.41
C9orf3-212ENST00000468164 MAP3K15Q6ZN16 1313 aa17.61■□□□□ 0.41
C9orf3-212ENST00000468164 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
C9orf3-212ENST00000468164 WDR90Q96KV7 1748 aa17.6■□□□□ 0.41
C9orf3-212ENST00000468164 ANXA1P04083 346 aa17.59■□□□□ 0.41
C9orf3-212ENST00000468164 NUTM1Q86Y26 1132 aa17.59■□□□□ 0.41
C9orf3-212ENST00000468164 PRKRIP1Q9H875 184 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-212ENST00000468164 NPR1P16066 1061 aa17.58■□□□□ 0.4
C9orf3-212ENST00000468164 TAOK3Q9H2K8 898 aa17.58■□□□□ 0.4
C9orf3-212ENST00000468164 LAMB2P55268 1798 aa17.58■□□□□ 0.4
C9orf3-212ENST00000468164 ZC3H4Q9UPT8 1303 aaKnown RBP17.57■□□□□ 0.4
C9orf3-212ENST00000468164 ERVV-1B6SEH8 477 aa17.57■□□□□ 0.4
C9orf3-212ENST00000468164 RGL2O15211 777 aa17.57■□□□□ 0.4
C9orf3-212ENST00000468164 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
C9orf3-212ENST00000468164 NYXQ9GZU5 481 aa17.57■□□□□ 0.4
C9orf3-212ENST00000468164 ABCC12Q96J65 1359 aa17.56■□□□□ 0.4
C9orf3-212ENST00000468164 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
C9orf3-212ENST00000468164 GLTPD2A6NH11 291 aa17.56■□□□□ 0.4
C9orf3-212ENST00000468164 KRT24Q2M2I5 525 aa17.56■□□□□ 0.4
C9orf3-212ENST00000468164 PROSER3Q2NL68 480 aa17.56■□□□□ 0.4
C9orf3-212ENST00000468164 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
C9orf3-212ENST00000468164 AIMP1Q12904 312 aaKnown RBP17.55■□□□□ 0.4
C9orf3-212ENST00000468164 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
C9orf3-212ENST00000468164 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
C9orf3-212ENST00000468164 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
C9orf3-212ENST00000468164 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
C9orf3-212ENST00000468164 TAF1P21675 1872 aa17.54■□□□□ 0.4
C9orf3-212ENST00000468164 UBN2Q6ZU65 1347 aa17.54■□□□□ 0.4
C9orf3-212ENST00000468164 CCDC93Q567U6 631 aa17.54■□□□□ 0.4
C9orf3-212ENST00000468164 DPY19L2Q6NUT2 758 aa17.54■□□□□ 0.4
C9orf3-212ENST00000468164 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
C9orf3-212ENST00000468164 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
C9orf3-212ENST00000468164 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
C9orf3-212ENST00000468164 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-212ENST00000468164 VEGFAP15692 232 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-212ENST00000468164 ALDH1B1P30837 517 aa17.52■□□□□ 0.4
C9orf3-212ENST00000468164 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-212ENST00000468164 APLP1P51693 650 aa17.52■□□□□ 0.4
C9orf3-212ENST00000468164 PDIA6Q15084 440 aa17.52■□□□□ 0.4
C9orf3-212ENST00000468164 ZNF428Q96B54 188 aa17.52■□□□□ 0.4
C9orf3-212ENST00000468164 LTBP3Q9NS15 1303 aa17.51■□□□□ 0.39
C9orf3-212ENST00000468164 CHL1O00533 1208 aa17.51■□□□□ 0.39
C9orf3-212ENST00000468164 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
C9orf3-212ENST00000468164 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
C9orf3-212ENST00000468164 PPP1R42Q7Z4L9 355 aa17.51■□□□□ 0.39
C9orf3-212ENST00000468164 ZNF34Q8IZ26 560 aa17.51■□□□□ 0.39
C9orf3-212ENST00000468164 XAGE3Q8WTP9 111 aa17.51■□□□□ 0.39
C9orf3-212ENST00000468164 APAF1O14727 1248 aa17.5■□□□□ 0.39
C9orf3-212ENST00000468164 HTRA3P83110 453 aa17.5■□□□□ 0.39
C9orf3-212ENST00000468164 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
C9orf3-212ENST00000468164 C7orf43Q8WVR3 580 aa17.5■□□□□ 0.39
C9orf3-212ENST00000468164 ZNF277Q9NRM2 450 aaPredicted RBP17.5■□□□□ 0.39
C9orf3-212ENST00000468164 CHPF2Q9P2E5 772 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms