RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 TAF1DQ9H5J8 278 aaPredicted RBP18.39■□□□□ 0.53
RPP40-204ENST00000468105 BCORQ6W2J9 1755 aa18.39■□□□□ 0.53
RPP40-204ENST00000468105 SLC51AQ86UW1 340 aa18.38■□□□□ 0.53
RPP40-204ENST00000468105 A0A087WZG4 1122 aa18.37■□□□□ 0.53
RPP40-204ENST00000468105 IL6STP40189 918 aaPredicted RBP18.37■□□□□ 0.53
RPP40-204ENST00000468105 STYK1Q6J9G0 422 aa18.37■□□□□ 0.53
RPP40-204ENST00000468105 L3MBTL3Q96JM7 780 aaPredicted RBP18.37■□□□□ 0.53
RPP40-204ENST00000468105 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
RPP40-204ENST00000468105 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
RPP40-204ENST00000468105 TTC5Q8N0Z6 440 aa18.36■□□□□ 0.53
RPP40-204ENST00000468105 CNBD1Q8NA66 436 aa18.36■□□□□ 0.53
RPP40-204ENST00000468105 SCN4AP35499 1836 aa18.35■□□□□ 0.53
RPP40-204ENST00000468105 COL4A5P29400 1685 aa18.35■□□□□ 0.53
RPP40-204ENST00000468105 FMR1Q06787 632 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPP40-204ENST00000468105 CNKSR1Q969H4 720 aa18.35■□□□□ 0.53
RPP40-204ENST00000468105 PHACTR3Q96KR7 559 aa18.35■□□□□ 0.53
RPP40-204ENST00000468105 SETDB2Q96T68 719 aa18.35■□□□□ 0.53
RPP40-204ENST00000468105 ZNF277Q9NRM2 450 aaPredicted RBP18.35■□□□□ 0.53
RPP40-204ENST00000468105 WBP1LQ9NX94 342 aa18.35■□□□□ 0.53
RPP40-204ENST00000468105 KIF7Q2M1P5 1343 aa18.34■□□□□ 0.53
RPP40-204ENST00000468105 CC2D1BQ5T0F9 858 aaKnown RBP18.34■□□□□ 0.53
RPP40-204ENST00000468105 LDHDQ86WU2 507 aa18.34■□□□□ 0.53
RPP40-204ENST00000468105 MASTLQ96GX5 879 aa18.34■□□□□ 0.53
RPP40-204ENST00000468105 PRDM10Q9NQV6 1147 aa18.34■□□□□ 0.53
RPP40-204ENST00000468105 SNED1Q8TER0 1413 aa18.33■□□□□ 0.53
RPP40-204ENST00000468105 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.53
RPP40-204ENST00000468105 LBX1P52954 281 aa18.33■□□□□ 0.52
RPP40-204ENST00000468105 DZIP3Q86Y13 1208 aaKnown RBP18.33■□□□□ 0.52
RPP40-204ENST00000468105 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
RPP40-204ENST00000468105 LTBP1Q14766 1721 aa18.32■□□□□ 0.52
RPP40-204ENST00000468105 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
RPP40-204ENST00000468105 GNAT3A8MTJ3 354 aa18.32■□□□□ 0.52
RPP40-204ENST00000468105 NBPF26B4DH59 902 aa18.32■□□□□ 0.52
RPP40-204ENST00000468105 MAP1SQ66K74 1059 aaPredicted RBP18.32■□□□□ 0.52
RPP40-204ENST00000468105 NBPF10Q6P3W6 841 aaKnown RBP18.32■□□□□ 0.52
RPP40-204ENST00000468105 NBPF15Q8N660 670 aa18.32■□□□□ 0.52
RPP40-204ENST00000468105 TMEM88BA6NKF7 163 aa18.31■□□□□ 0.52
RPP40-204ENST00000468105 EAPPQ56P03 285 aaPredicted RBP18.31■□□□□ 0.52
RPP40-204ENST00000468105 RNF123Q5XPI4 1314 aa18.3■□□□□ 0.52
RPP40-204ENST00000468105 HSPA8P11142 646 aaKnown RBP18.3■□□□□ 0.52
RPP40-204ENST00000468105 TEFQ10587 303 aa18.3■□□□□ 0.52
RPP40-204ENST00000468105 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
RPP40-204ENST00000468105 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
RPP40-204ENST00000468105 CTCFP49711 727 aaPredicted RBP18.29■□□□□ 0.52
RPP40-204ENST00000468105 ST5P78524 1137 aa18.29■□□□□ 0.52
RPP40-204ENST00000468105 FKBP4Q02790 459 aaKnown RBP eCLIP18.29■□□□□ 0.52
RPP40-204ENST00000468105 CNGB1Q14028 1251 aaPredicted RBP18.29■□□□□ 0.52
RPP40-204ENST00000468105 IQCA1LA6NCM1 817 aa18.28■□□□□ 0.52
RPP40-204ENST00000468105 FZD9O00144 591 aa18.28■□□□□ 0.52
RPP40-204ENST00000468105 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
RPP40-204ENST00000468105 EPHX2P34913 555 aa18.28■□□□□ 0.52
RPP40-204ENST00000468105 HLFQ16534 295 aa18.28■□□□□ 0.52
RPP40-204ENST00000468105 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
RPP40-204ENST00000468105 RASSF10A6NK89 507 aa18.27■□□□□ 0.52
RPP40-204ENST00000468105 FAM177BA6PVY3 158 aa18.27■□□□□ 0.52
RPP40-204ENST00000468105 NBPF5PQ86XG9 351 aaPredicted RBP18.27■□□□□ 0.52
RPP40-204ENST00000468105 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
RPP40-204ENST00000468105 HACL1Q9UJ83 578 aa18.27■□□□□ 0.52
RPP40-204ENST00000468105 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
RPP40-204ENST00000468105 NPR1P16066 1061 aa18.26■□□□□ 0.51
RPP40-204ENST00000468105 SYNE4Q8N205 404 aa18.26■□□□□ 0.51
RPP40-204ENST00000468105 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
RPP40-204ENST00000468105 SOGA3Q5TF21 947 aa18.25■□□□□ 0.51
RPP40-204ENST00000468105 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
RPP40-204ENST00000468105 ABHD8Q96I13 439 aa18.25■□□□□ 0.51
RPP40-204ENST00000468105 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
RPP40-204ENST00000468105 ABCC12Q96J65 1359 aa18.25■□□□□ 0.51
RPP40-204ENST00000468105 NPHP1O15259 732 aa18.24■□□□□ 0.51
RPP40-204ENST00000468105 SLC34A2O95436 690 aa18.24■□□□□ 0.51
RPP40-204ENST00000468105 IARSP41252 1262 aaKnown RBP18.24■□□□□ 0.51
RPP40-204ENST00000468105 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
RPP40-204ENST00000468105 DEFB115Q30KQ5 88 aa18.24■□□□□ 0.51
RPP40-204ENST00000468105 CLEC4GQ6UXB4 293 aa18.24■□□□□ 0.51
RPP40-204ENST00000468105 MCM10Q7L590 875 aa18.24■□□□□ 0.51
RPP40-204ENST00000468105 NIP7Q9Y221 180 aaKnown RBP eCLIP18.24■□□□□ 0.51
RPP40-204ENST00000468105 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
RPP40-204ENST00000468105 PRKAR2BP31323 418 aa18.23■□□□□ 0.51
RPP40-204ENST00000468105 FAM161AQ3B820 660 aa18.23■□□□□ 0.51
RPP40-204ENST00000468105 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
RPP40-204ENST00000468105 AIDAQ96BJ3 306 aa18.22■□□□□ 0.51
RPP40-204ENST00000468105 THSD7BQ9C0I4 1608 aa18.22■□□□□ 0.51
RPP40-204ENST00000468105 TRAF5O00463 557 aa18.21■□□□□ 0.51
RPP40-204ENST00000468105 EPS15P42566 896 aa18.21■□□□□ 0.51
RPP40-204ENST00000468105 SCNN1DP51172 638 aa18.21■□□□□ 0.51
RPP40-204ENST00000468105 CST9Q5W186 159 aa18.21■□□□□ 0.51
RPP40-204ENST00000468105 NUTM1Q86Y26 1132 aa18.21■□□□□ 0.51
RPP40-204ENST00000468105 DDX21Q9NR30 783 aaKnown RBP eCLIP18.21■□□□□ 0.51
RPP40-204ENST00000468105 C3orf67Q6ZVT6 689 aa18.2■□□□□ 0.5
RPP40-204ENST00000468105 GPC2Q8N158 579 aa18.2■□□□□ 0.5
RPP40-204ENST00000468105 MIS18AQ9NYP9 233 aa18.2■□□□□ 0.5
RPP40-204ENST00000468105 TSKSQ9UJT2 592 aa18.2■□□□□ 0.5
RPP40-204ENST00000468105 SNRPA1P09661 255 aaKnown RBP18.19■□□□□ 0.5
RPP40-204ENST00000468105 CRY2Q49AN0 593 aa18.19■□□□□ 0.5
RPP40-204ENST00000468105 CYP4F22Q6NT55 531 aa18.19■□□□□ 0.5
RPP40-204ENST00000468105 TPTE2Q6XPS3 522 aa18.19■□□□□ 0.5
RPP40-204ENST00000468105 RTKN2Q8IZC4 609 aa18.19■□□□□ 0.5
RPP40-204ENST00000468105 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
RPP40-204ENST00000468105 ABT1Q9ULW3 272 aaKnown RBP18.18■□□□□ 0.5
RPP40-204ENST00000468105 GJA3Q9Y6H8 435 aa18.18■□□□□ 0.5
RPP40-204ENST00000468105 PSMD1Q99460 953 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms