RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 KIF21BO75037 1637 aa7.46□□□□□ -1.21
SSR3-204ENST00000467733 ZCCHC11Q5TAX3 1644 aaKnown RBP7.46□□□□□ -1.21
SSR3-204ENST00000467733 SLFNL1Q499Z3 407 aa7.46□□□□□ -1.22
SSR3-204ENST00000467733 PRM3Q9NNZ6 103 aa7.46□□□□□ -1.22
SSR3-204ENST00000467733 AVENQ9NQS1 362 aaPredicted RBP7.46□□□□□ -1.22
SSR3-204ENST00000467733 NEURL1BA8MQ27 555 aa7.45□□□□□ -1.22
SSR3-204ENST00000467733 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
SSR3-204ENST00000467733 ADH6P28332 368 aa7.45□□□□□ -1.22
SSR3-204ENST00000467733 DNAAF2Q9NVR5 837 aaKnown RBP7.45□□□□□ -1.22
SSR3-204ENST00000467733 TNIKQ9UKE5 1360 aa7.45□□□□□ -1.22
SSR3-204ENST00000467733 LMTK3Q96Q04 1460 aa7.44□□□□□ -1.22
SSR3-204ENST00000467733 KDM5BQ9UGL1 1544 aa7.44□□□□□ -1.22
SSR3-204ENST00000467733 ATP4AP20648 1035 aa7.44□□□□□ -1.22
SSR3-204ENST00000467733 FAM182BQ5T319 152 aa7.44□□□□□ -1.22
SSR3-204ENST00000467733 CD163Q86VB7 1156 aa7.44□□□□□ -1.22
SSR3-204ENST00000467733 NIFKQ9BYG3 293 aaKnown RBP7.44□□□□□ -1.22
SSR3-204ENST00000467733 ZCCHC2Q9C0B9 1178 aaKnown RBP7.44□□□□□ -1.22
SSR3-204ENST00000467733 IQGAP2Q13576 1575 aa7.44□□□□□ -1.22
SSR3-204ENST00000467733 CFAP43Q8NDM7 1665 aa7.44□□□□□ -1.22
SSR3-204ENST00000467733 CARMIL2Q6F5E8 1435 aa7.44□□□□□ -1.22
SSR3-204ENST00000467733 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
SSR3-204ENST00000467733 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
SSR3-204ENST00000467733 OXLD1Q5BKU9 147 aa7.43□□□□□ -1.22
SSR3-204ENST00000467733 CHSY3Q70JA7 882 aa7.43□□□□□ -1.22
SSR3-204ENST00000467733 PHTF2Q8N3S3 785 aa7.43□□□□□ -1.22
SSR3-204ENST00000467733 SNRKQ9NRH2 765 aa7.43□□□□□ -1.22
SSR3-204ENST00000467733 INHAP05111 366 aa7.42□□□□□ -1.22
SSR3-204ENST00000467733 GDF10P55107 478 aa7.42□□□□□ -1.22
SSR3-204ENST00000467733 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
SSR3-204ENST00000467733 UACAQ9BZF9 1416 aa7.42□□□□□ -1.22
SSR3-204ENST00000467733 ADAMTSL3P82987 1691 aa7.41□□□□□ -1.22
SSR3-204ENST00000467733 CHRNA4P43681 627 aa7.41□□□□□ -1.22
SSR3-204ENST00000467733 SCNN1DP51172 638 aa7.41□□□□□ -1.22
SSR3-204ENST00000467733 WDR7Q9Y4E6 1490 aa7.41□□□□□ -1.22
SSR3-204ENST00000467733 PCF11O94913 1555 aaKnown RBP7.41□□□□□ -1.22
SSR3-204ENST00000467733 DCDC2BA2VCK2 349 aa7.4□□□□□ -1.22
SSR3-204ENST00000467733 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
SSR3-204ENST00000467733 FAM157BP0CG42 384 aa7.4□□□□□ -1.22
SSR3-204ENST00000467733 MAPTP10636 758 aaKnown RBP7.4□□□□□ -1.22
SSR3-204ENST00000467733 TATP17735 454 aaPredicted RBP7.4□□□□□ -1.22
SSR3-204ENST00000467733 MAP7D1Q3KQU3 841 aa7.4□□□□□ -1.22
SSR3-204ENST00000467733 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
SSR3-204ENST00000467733 AIDAQ96BJ3 306 aa7.4□□□□□ -1.22
SSR3-204ENST00000467733 ZDHHC3Q9NYG2 299 aa7.4□□□□□ -1.22
SSR3-204ENST00000467733 TBC1D2BQ9UPU7 963 aa7.4□□□□□ -1.22
SSR3-204ENST00000467733 MAGI3Q5TCQ9 1506 aa7.4□□□□□ -1.22
SSR3-204ENST00000467733 DISP1Q96F81 1524 aa7.39□□□□□ -1.23
SSR3-204ENST00000467733 A0A1W2PNR3 127 aa7.39□□□□□ -1.23
SSR3-204ENST00000467733 SPATA31C1P0DKV0 1188 aa7.39□□□□□ -1.23
SSR3-204ENST00000467733 SMTNP53814 917 aa7.39□□□□□ -1.23
SSR3-204ENST00000467733 TNP2Q05952 138 aa7.39□□□□□ -1.23
SSR3-204ENST00000467733 TSGA10IPQ3SY00 556 aa7.39□□□□□ -1.23
SSR3-204ENST00000467733 FCHSD1Q86WN1 690 aa7.39□□□□□ -1.23
SSR3-204ENST00000467733 PTPRMP28827 1452 aa7.38□□□□□ -1.23
SSR3-204ENST00000467733 KIF27Q86VH2 1401 aa7.38□□□□□ -1.23
SSR3-204ENST00000467733 SPDYE3A6NKU9 549 aa7.38□□□□□ -1.23
SSR3-204ENST00000467733 KHNYNO15037 678 aaKnown RBP7.38□□□□□ -1.23
SSR3-204ENST00000467733 CD33P20138 364 aa7.38□□□□□ -1.23
SSR3-204ENST00000467733 BRPF1P55201 1214 aaPredicted RBP7.38□□□□□ -1.23
SSR3-204ENST00000467733 ZNF468Q5VIY5 522 aaPredicted RBP7.38□□□□□ -1.23
SSR3-204ENST00000467733 GJA3Q9Y6H8 435 aa7.38□□□□□ -1.23
SSR3-204ENST00000467733 KIAA0556O60303 1618 aa7.38□□□□□ -1.23
SSR3-204ENST00000467733 UGGT2Q9NYU1 1516 aa7.37□□□□□ -1.23
SSR3-204ENST00000467733 TTBK1Q5TCY1 1321 aaPredicted RBP7.37□□□□□ -1.23
SSR3-204ENST00000467733 LAMC2Q13753 1193 aa7.37□□□□□ -1.23
SSR3-204ENST00000467733 SAMD5Q5TGI4 173 aa7.37□□□□□ -1.23
SSR3-204ENST00000467733 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
SSR3-204ENST00000467733 PRR12Q9ULL5 1215 aa7.37□□□□□ -1.23
SSR3-204ENST00000467733 BCORL1Q5H9F3 1711 aa7.37□□□□□ -1.23
SSR3-204ENST00000467733 GATA4P43694 442 aa7.36□□□□□ -1.23
SSR3-204ENST00000467733 MTFR1Q15390 333 aa7.36□□□□□ -1.23
SSR3-204ENST00000467733 KLF15Q9UIH9 416 aa7.36□□□□□ -1.23
SSR3-204ENST00000467733 MADDQ8WXG6 1647 aa7.36□□□□□ -1.23
SSR3-204ENST00000467733 ARAP3Q8WWN8 1544 aa7.36□□□□□ -1.23
SSR3-204ENST00000467733 CD109Q6YHK3 1445 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 A6NJY4 79 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 CDK2AP1O14519 115 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 IRF5Q13568 498 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 DOC2BQ14184 412 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 PLPP7Q8NBV4 271 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 TRIM11Q96F44 468 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 SLC4A9Q96Q91 983 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 SEMA6BQ9H3T3 888 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 MARK1Q9P0L2 795 aa7.35□□□□□ -1.23
SSR3-204ENST00000467733 ELOA3CA0A087WX78 387 aaPredicted RBP7.34□□□□□ -1.23
SSR3-204ENST00000467733 ELOA3DA6NLF2 546 aaPredicted RBP7.34□□□□□ -1.23
SSR3-204ENST00000467733 ALAS2P22557 587 aa7.34□□□□□ -1.23
SSR3-204ENST00000467733 SOX11P35716 441 aa7.34□□□□□ -1.23
SSR3-204ENST00000467733 PCBP4P57723 403 aaKnown RBP7.34□□□□□ -1.23
SSR3-204ENST00000467733 ELOA3BQ3SY89 546 aa7.34□□□□□ -1.23
SSR3-204ENST00000467733 ZNF295-AS1Q8N0V1 137 aa7.34□□□□□ -1.23
SSR3-204ENST00000467733 ELOA3Q8NG57 546 aa7.34□□□□□ -1.23
SSR3-204ENST00000467733 ZIC5Q96T25 663 aa7.34□□□□□ -1.23
SSR3-204ENST00000467733 PLVAPQ9BX97 442 aa7.34□□□□□ -1.23
SSR3-204ENST00000467733 IQSEC3Q9UPP2 1182 aaPredicted RBP7.34□□□□□ -1.23
SSR3-204ENST00000467733 CARMIL1Q5VZK9 1371 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 RIMS1Q86UR5 1692 aaKnown RBP7.33□□□□□ -1.24
SSR3-204ENST00000467733 WASHC4Q2M389 1173 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 PRRT3Q5FWE3 981 aa7.33□□□□□ -1.24
SSR3-204ENST00000467733 ZMYM1Q5SVZ6 1142 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 372.5 ms