RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 NPHP1O15259 732 aa21.04■□□□□ 0.96
TSSC4-208ENST00000467308 SRGNP10124 158 aa21.04■□□□□ 0.96
TSSC4-208ENST00000467308 CACNA1SQ13698 1873 aa21.04■□□□□ 0.96
TSSC4-208ENST00000467308 BTBD11A6QL63 1104 aa21.03■□□□□ 0.96
TSSC4-208ENST00000467308 HSPA1AP0DMV8 641 aaKnown RBP21.03■□□□□ 0.96
TSSC4-208ENST00000467308 HSPA1BP0DMV9 641 aaKnown RBP21.03■□□□□ 0.96
TSSC4-208ENST00000467308 PRPF40BQ6NWY9 871 aaKnown RBP21.03■□□□□ 0.96
TSSC4-208ENST00000467308 DZIP3Q86Y13 1208 aaKnown RBP21.03■□□□□ 0.96
TSSC4-208ENST00000467308 MASTLQ96GX5 879 aa21.03■□□□□ 0.96
TSSC4-208ENST00000467308 CLEC4GQ6UXB4 293 aa21.02■□□□□ 0.96
TSSC4-208ENST00000467308 KCNQ3O43525 872 aa21.01■□□□□ 0.95
TSSC4-208ENST00000467308 CHADLQ6NUI6 762 aa21.01■□□□□ 0.95
TSSC4-208ENST00000467308 PHACTR3Q96KR7 559 aa21.01■□□□□ 0.95
TSSC4-208ENST00000467308 CREBZFQ9NS37 354 aa21.01■□□□□ 0.95
TSSC4-208ENST00000467308 RSPH6AQ9H0K4 717 aa21■□□□□ 0.95
TSSC4-208ENST00000467308 USP16Q9Y5T5 823 aa21■□□□□ 0.95
TSSC4-208ENST00000467308 RGL2O15211 777 aa20.99■□□□□ 0.95
TSSC4-208ENST00000467308 DDNO94850 711 aaPredicted RBP20.99■□□□□ 0.95
TSSC4-208ENST00000467308 PRKAR2BP31323 418 aa20.99■□□□□ 0.95
TSSC4-208ENST00000467308 ZNF652Q9Y2D9 606 aa20.99■□□□□ 0.95
TSSC4-208ENST00000467308 SCN4AP35499 1836 aa20.99■□□□□ 0.95
TSSC4-208ENST00000467308 IQCA1LA6NCM1 817 aa20.98■□□□□ 0.95
TSSC4-208ENST00000467308 NBPF5PQ86XG9 351 aaPredicted RBP20.98■□□□□ 0.95
TSSC4-208ENST00000467308 C7orf43Q8WVR3 580 aa20.98■□□□□ 0.95
TSSC4-208ENST00000467308 CFAP53Q96M91 514 aa20.98■□□□□ 0.95
TSSC4-208ENST00000467308 KLRG2A4D1S0 409 aaPredicted RBP20.97■□□□□ 0.95
TSSC4-208ENST00000467308 SNRPA1P09661 255 aaKnown RBP20.97■□□□□ 0.95
TSSC4-208ENST00000467308 L3MBTL3Q96JM7 780 aaPredicted RBP20.97■□□□□ 0.95
TSSC4-208ENST00000467308 CAPN15O75808 1086 aa20.96■□□□□ 0.95
TSSC4-208ENST00000467308 NPR1P16066 1061 aa20.96■□□□□ 0.95
TSSC4-208ENST00000467308 CNGB1Q14028 1251 aaPredicted RBP20.96■□□□□ 0.95
TSSC4-208ENST00000467308 CCDC93Q567U6 631 aa20.96■□□□□ 0.95
TSSC4-208ENST00000467308 POTEIP0CG38 1075 aa20.95■□□□□ 0.94
TSSC4-208ENST00000467308 POTEJP0CG39 1038 aa20.95■□□□□ 0.94
TSSC4-208ENST00000467308 RTF1Q92541 710 aaKnown RBP20.95■□□□□ 0.94
TSSC4-208ENST00000467308 NUDCQ9Y266 331 aa20.95■□□□□ 0.94
TSSC4-208ENST00000467308 PRAMEF22A3QJZ6 481 aa20.94■□□□□ 0.94
TSSC4-208ENST00000467308 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
TSSC4-208ENST00000467308 TPTE2Q6XPS3 522 aa20.94■□□□□ 0.94
TSSC4-208ENST00000467308 LDHDQ86WU2 507 aa20.94■□□□□ 0.94
TSSC4-208ENST00000467308 PASKQ96RG2 1323 aa20.93■□□□□ 0.94
TSSC4-208ENST00000467308 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
TSSC4-208ENST00000467308 FKBP4Q02790 459 aaKnown RBP eCLIP20.92■□□□□ 0.94
TSSC4-208ENST00000467308 MCM10Q7L590 875 aa20.92■□□□□ 0.94
TSSC4-208ENST00000467308 TAF1DQ9H5J8 278 aaPredicted RBP20.92■□□□□ 0.94
TSSC4-208ENST00000467308 MKRN1Q9UHC7 482 aaKnown RBP20.92■□□□□ 0.94
TSSC4-208ENST00000467308 NIP7Q9Y221 180 aaKnown RBP eCLIP20.92■□□□□ 0.94
TSSC4-208ENST00000467308 NBPF26B4DH59 902 aa20.91■□□□□ 0.94
TSSC4-208ENST00000467308 CNTNAP1P78357 1384 aa20.91■□□□□ 0.94
TSSC4-208ENST00000467308 DDX10Q13206 875 aaKnown RBP20.91■□□□□ 0.94
TSSC4-208ENST00000467308 NBPF10Q6P3W6 841 aaKnown RBP20.91■□□□□ 0.94
TSSC4-208ENST00000467308 RTKN2Q8IZC4 609 aa20.91■□□□□ 0.94
TSSC4-208ENST00000467308 NBPF15Q8N660 670 aa20.91■□□□□ 0.94
TSSC4-208ENST00000467308 U2AF1L5P0DN76 240 aaPredicted RBP20.9■□□□□ 0.94
TSSC4-208ENST00000467308 U2AF1Q01081 240 aaKnown RBP eCLIP20.9■□□□□ 0.94
TSSC4-208ENST00000467308 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
TSSC4-208ENST00000467308 ZNF277Q9NRM2 450 aaPredicted RBP20.89■□□□□ 0.93
TSSC4-208ENST00000467308 ALDH1B1P30837 517 aa20.88■□□□□ 0.93
TSSC4-208ENST00000467308 LAMB4A4D0S4 1761 aa20.87■□□□□ 0.93
TSSC4-208ENST00000467308 ADAMTSL1Q8N6G6 1762 aa20.87■□□□□ 0.93
TSSC4-208ENST00000467308 ZNF541Q9H0D2 1346 aa20.87■□□□□ 0.93
TSSC4-208ENST00000467308 ITGBL1O95965 494 aaPredicted RBP20.87■□□□□ 0.93
TSSC4-208ENST00000467308 HACL1Q9UJ83 578 aa20.87■□□□□ 0.93
TSSC4-208ENST00000467308 TMEM88BA6NKF7 163 aa20.86■□□□□ 0.93
TSSC4-208ENST00000467308 FZD9O00144 591 aa20.86■□□□□ 0.93
TSSC4-208ENST00000467308 PPP2R1AP30153 589 aa20.86■□□□□ 0.93
TSSC4-208ENST00000467308 DCTN1Q14203 1278 aa20.86■□□□□ 0.93
TSSC4-208ENST00000467308 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
TSSC4-208ENST00000467308 GTF2E1P29083 439 aaPredicted RBP20.85■□□□□ 0.93
TSSC4-208ENST00000467308 IARSP41252 1262 aaKnown RBP20.85■□□□□ 0.93
TSSC4-208ENST00000467308 HLFQ16534 295 aa20.85■□□□□ 0.93
TSSC4-208ENST00000467308 CRY2Q49AN0 593 aa20.85■□□□□ 0.93
TSSC4-208ENST00000467308 OLFM4Q6UX06 510 aa20.85■□□□□ 0.93
TSSC4-208ENST00000467308 PNMA8AQ86V59 439 aaPredicted RBP20.85■□□□□ 0.93
TSSC4-208ENST00000467308 EPHX2P34913 555 aa20.84■□□□□ 0.93
TSSC4-208ENST00000467308 EAPPQ56P03 285 aaPredicted RBP20.84■□□□□ 0.93
TSSC4-208ENST00000467308 PSMD1Q99460 953 aa20.84■□□□□ 0.93
TSSC4-208ENST00000467308 NYXQ9GZU5 481 aa20.84■□□□□ 0.93
TSSC4-208ENST00000467308 PRDM10Q9NQV6 1147 aa20.84■□□□□ 0.93
TSSC4-208ENST00000467308 SNED1Q8TER0 1413 aa20.84■□□□□ 0.93
TSSC4-208ENST00000467308 NUP98P52948 1817 aa20.83■□□□□ 0.93
TSSC4-208ENST00000467308 FAM177BA6PVY3 158 aa20.83■□□□□ 0.93
TSSC4-208ENST00000467308 ERVV-1B6SEH8 477 aa20.83■□□□□ 0.93
TSSC4-208ENST00000467308 FOXN1O15353 648 aa20.83■□□□□ 0.93
TSSC4-208ENST00000467308 GPC2Q8N158 579 aa20.83■□□□□ 0.93
TSSC4-208ENST00000467308 SYNE4Q8N205 404 aa20.83■□□□□ 0.93
TSSC4-208ENST00000467308 VEGFBP49765 207 aa20.82■□□□□ 0.92
TSSC4-208ENST00000467308 CC2D2BQ6DHV5 1058 aa20.82■□□□□ 0.92
TSSC4-208ENST00000467308 RNF123Q5XPI4 1314 aa20.81■□□□□ 0.92
TSSC4-208ENST00000467308 PNISRQ8TF01 805 aaKnown RBP20.81■□□□□ 0.92
TSSC4-208ENST00000467308 JDP2Q8WYK2 163 aa20.81■□□□□ 0.92
TSSC4-208ENST00000467308 AIDAQ96BJ3 306 aa20.81■□□□□ 0.92
TSSC4-208ENST00000467308 CLEC11AQ9Y240 323 aa20.81■□□□□ 0.92
TSSC4-208ENST00000467308 KDM3BQ7LBC6 1761 aa20.81■□□□□ 0.92
TSSC4-208ENST00000467308 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
TSSC4-208ENST00000467308 RIC1Q4ADV7 1423 aa20.8■□□□□ 0.92
TSSC4-208ENST00000467308 CTCFP49711 727 aaPredicted RBP20.8■□□□□ 0.92
TSSC4-208ENST00000467308 GRIPAP1Q4V328 841 aa20.8■□□□□ 0.92
TSSC4-208ENST00000467308 CNTROBQ8N137 903 aa20.8■□□□□ 0.92
TSSC4-208ENST00000467308 MIS18AQ9NYP9 233 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms