RNA–Protein interactions for RNA: ENST00000467276.5

RNF144A-205, Transcript of ring finger protein 144A, human

TSL 3

Gene RNF144A, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF144A-205	ENST00000467276	MAP3K15	Q6ZN16	1313 aa		33.26	■■■□□ 2.91
RNF144A-205	ENST00000467276	ERVV-1	B6SEH8	477 aa		33.25	■■■□□ 2.91
RNF144A-205	ENST00000467276	KIF6	Q6ZMV9	814 aa		33.25	■■■□□ 2.91
RNF144A-205	ENST00000467276	G2E3	Q7L622	706 aa		33.25	■■■□□ 2.91
RNF144A-205	ENST00000467276	SSH1	Q8WYL5	1049 aa		33.24	■■■□□ 2.91
RNF144A-205	ENST00000467276	CACNA1F	O60840	1977 aa		33.23	■■■□□ 2.91
RNF144A-205	ENST00000467276	RGL2	O15211	777 aa		33.23	■■■□□ 2.91
RNF144A-205	ENST00000467276	HLF	Q16534	295 aa		33.23	■■■□□ 2.91
RNF144A-205	ENST00000467276	ALDH1L2	Q3SY69	923 aa		33.23	■■■□□ 2.91
RNF144A-205	ENST00000467276	CLEC4G	Q6UXB4	293 aa		33.22	■■■□□ 2.91
RNF144A-205	ENST00000467276	MRPL50	Q8N5N7	158 aa	Known RBP	33.22	■■■□□ 2.91
RNF144A-205	ENST00000467276	ZBTB3	Q9H5J0	574 aa		33.22	■■■□□ 2.91
RNF144A-205	ENST00000467276	ANKRD13D	Q6ZTN6	518 aa		33.21	■■■□□ 2.91
RNF144A-205	ENST00000467276	SGIP1	Q9BQI5	828 aa		33.21	■■■□□ 2.91
RNF144A-205	ENST00000467276	SPON1	Q9HCB6	807 aa		33.21	■■■□□ 2.91
RNF144A-205	ENST00000467276	COL24A1	Q17RW2	1714 aa		33.21	■■■□□ 2.91
RNF144A-205	ENST00000467276	TM4SF1	P30408	202 aa		33.2	■■■□□ 2.91
RNF144A-205	ENST00000467276	PTGER2	P43116	358 aa		33.2	■■■□□ 2.91
RNF144A-205	ENST00000467276	SCN7A	Q01118	1682 aa		33.2	■■■□□ 2.9
RNF144A-205	ENST00000467276	BCOR	Q6W2J9	1755 aa		33.19	■■■□□ 2.9
RNF144A-205	ENST00000467276	RARS	P54136	660 aa	Known RBP	33.19	■■■□□ 2.9
RNF144A-205	ENST00000467276	PLBD2	Q8NHP8	589 aa		33.19	■■■□□ 2.9
RNF144A-205	ENST00000467276	FLII	Q13045	1269 aa		33.18	■■■□□ 2.9
RNF144A-205	ENST00000467276	ZNF652	Q9Y2D9	606 aa		33.18	■■■□□ 2.9
RNF144A-205	ENST00000467276	NFIX	Q14938	502 aa		33.17	■■■□□ 2.9
RNF144A-205	ENST00000467276	TBC1D9B	Q66K14	1250 aa		33.17	■■■□□ 2.9
RNF144A-205	ENST00000467276	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.17	■■■□□ 2.9
RNF144A-205	ENST00000467276	BCL2L13	Q9BXK5	485 aa		33.16	■■■□□ 2.9
RNF144A-205	ENST00000467276	MMP10	P09238	476 aa		33.15	■■■□□ 2.9
RNF144A-205	ENST00000467276	NUP98	P52948	1817 aa		33.15	■■■□□ 2.9
RNF144A-205	ENST00000467276	DDX58	O95786	925 aa	Known RBP	33.14	■■■□□ 2.9
RNF144A-205	ENST00000467276	SMC4	Q9NTJ3	1288 aa		33.14	■■■□□ 2.9
RNF144A-205	ENST00000467276	POLD1	P28340	1107 aa		33.13	■■■□□ 2.89
RNF144A-205	ENST00000467276	BRPF1	P55201	1214 aa	Predicted RBP	33.13	■■■□□ 2.89
RNF144A-205	ENST00000467276	DDR1	Q08345	913 aa		33.13	■■■□□ 2.89
RNF144A-205	ENST00000467276	KSR2	Q6VAB6	950 aa		33.13	■■■□□ 2.89
RNF144A-205	ENST00000467276	BICDL1	Q6ZP65	573 aa		33.13	■■■□□ 2.89
RNF144A-205	ENST00000467276	RIC3	Q7Z5B4	369 aa		33.13	■■■□□ 2.89
RNF144A-205	ENST00000467276	PI4KAP2	A4QPH2	592 aa		33.11	■■■□□ 2.89
RNF144A-205	ENST00000467276	FKBP5	Q13451	457 aa	Predicted RBP	33.11	■■■□□ 2.89
RNF144A-205	ENST00000467276	TCIRG1	Q13488	830 aa		33.11	■■■□□ 2.89
RNF144A-205	ENST00000467276	ZNF34	Q8IZ26	560 aa		33.11	■■■□□ 2.89
RNF144A-205	ENST00000467276	PI4KAP1	Q8N8J0	262 aa		33.11	■■■□□ 2.89
RNF144A-205	ENST00000467276	POLRMT	O00411	1230 aa	Known RBP	33.1	■■■□□ 2.89
RNF144A-205	ENST00000467276	SETDB2	Q96T68	719 aa		33.1	■■■□□ 2.89
RNF144A-205	ENST00000467276	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.1	■■■□□ 2.89
RNF144A-205	ENST00000467276	MAP3K2	Q9Y2U5	619 aa		33.1	■■■□□ 2.89
RNF144A-205	ENST00000467276	ADCY9	O60503	1353 aa		33.09	■■■□□ 2.89
RNF144A-205	ENST00000467276	HSP90AB3P	Q58FF7	597 aa		33.09	■■■□□ 2.89
RNF144A-205	ENST00000467276	ATP10D	Q9P241	1426 aa		33.09	■■■□□ 2.89
RNF144A-205	ENST00000467276	BCAR3	O75815	825 aa		33.08	■■■□□ 2.89
RNF144A-205	ENST00000467276	PARP3	Q9Y6F1	533 aa		33.08	■■■□□ 2.89
RNF144A-205	ENST00000467276	METTL22	Q9BUU2	404 aa	Predicted RBP	33.07	■■■□□ 2.88
RNF144A-205	ENST00000467276	GPT	P24298	496 aa		33.06	■■■□□ 2.88
RNF144A-205	ENST00000467276	SERPINB2	P05120	415 aa		33.05	■■■□□ 2.88
RNF144A-205	ENST00000467276	ISCA1	Q9BUE6	129 aa		33.05	■■■□□ 2.88
RNF144A-205	ENST00000467276	NOB1	Q9ULX3	412 aa	Known RBP	33.05	■■■□□ 2.88
RNF144A-205	ENST00000467276	ARFGEF2	Q9Y6D5	1785 aa		33.05	■■■□□ 2.88
RNF144A-205	ENST00000467276	PTPRC	P08575	1304 aa		33.04	■■■□□ 2.88
RNF144A-205	ENST00000467276	UBN2	Q6ZU65	1347 aa		33.04	■■■□□ 2.88
RNF144A-205	ENST00000467276		F6X3S4	739 aa		33.03	■■■□□ 2.88
RNF144A-205	ENST00000467276	DNAAF4	Q8WXU2	420 aa		33.03	■■■□□ 2.88
RNF144A-205	ENST00000467276	MYD88	Q99836	296 aa		33.03	■■■□□ 2.88
RNF144A-205	ENST00000467276	CARMIL3	Q8ND23	1372 aa		33.03	■■■□□ 2.88
RNF144A-205	ENST00000467276	ATP5J2-PTCD1	G3V325	749 aa		33.02	■■■□□ 2.88
RNF144A-205	ENST00000467276	TRIM28	Q13263	835 aa	Known RBP	33.02	■■■□□ 2.88
RNF144A-205	ENST00000467276	PARP10	Q53GL7	1025 aa		33.01	■■■□□ 2.87
RNF144A-205	ENST00000467276	SUSD4	Q5VX71	490 aa		33.01	■■■□□ 2.87
RNF144A-205	ENST00000467276	NLRP10	Q86W26	655 aa		33.01	■■■□□ 2.87
RNF144A-205	ENST00000467276	LRP5	O75197	1615 aa		33	■■■□□ 2.87
RNF144A-205	ENST00000467276	RCAN3	Q9UKA8	241 aa		33	■■■□□ 2.87
RNF144A-205	ENST00000467276	ANKRD36C	Q5JPF3	1778 aa		33	■■■□□ 2.87
RNF144A-205	ENST00000467276	AFDN	P55196	1824 aa	Known RBP	32.98	■■■□□ 2.87
RNF144A-205	ENST00000467276	FAM177B	A6PVY3	158 aa		32.98	■■■□□ 2.87
RNF144A-205	ENST00000467276	IGKV5-2	P06315	115 aa		32.98	■■■□□ 2.87
RNF144A-205	ENST00000467276	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.98	■■■□□ 2.87
RNF144A-205	ENST00000467276	ARHGAP45	Q92619	1136 aa		32.98	■■■□□ 2.87
RNF144A-205	ENST00000467276	KIF16B	Q96L93	1317 aa		32.98	■■■□□ 2.87
RNF144A-205	ENST00000467276	NRXN2	Q9P2S2	1712 aa		32.97	■■■□□ 2.87
RNF144A-205	ENST00000467276	NEXN	Q0ZGT2	675 aa		32.97	■■■□□ 2.87
RNF144A-205	ENST00000467276	TPTE2	Q6XPS3	522 aa		32.97	■■■□□ 2.87
RNF144A-205	ENST00000467276	PRR5L	Q6MZQ0	368 aa		32.96	■■■□□ 2.87
RNF144A-205	ENST00000467276	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.96	■■■□□ 2.87
RNF144A-205	ENST00000467276	BEND3	Q5T5X7	828 aa		32.95	■■■□□ 2.87
RNF144A-205	ENST00000467276	PPP1R42	Q7Z4L9	355 aa		32.95	■■■□□ 2.87
RNF144A-205	ENST00000467276	CCDC191	Q8NCU4	936 aa		32.95	■■■□□ 2.87
RNF144A-205	ENST00000467276	IPO8	O15397	1037 aa	Known RBP	32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	NTSR2	O95665	410 aa		32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	CNBD1	Q8NA66	436 aa		32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	LINS1	Q8NG48	757 aa		32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	FRAT1	Q92837	279 aa	Predicted RBP	32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	UTP14A	Q9BVJ6	771 aa	Known RBP	32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	API5	Q9BZZ5	524 aa	Known RBP	32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	NYX	Q9GZU5	481 aa		32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.94	■■■□□ 2.86
RNF144A-205	ENST00000467276	NEURL1B	A8MQ27	555 aa		32.93	■■■□□ 2.86
RNF144A-205	ENST00000467276	CWF19L2	Q2TBE0	894 aa	Known RBP	32.93	■■■□□ 2.86
RNF144A-205	ENST00000467276	SLC4A10	Q6U841	1118 aa		32.92	■■■□□ 2.86
RNF144A-205	ENST00000467276	CCDC24	Q8N4L8	307 aa		32.92	■■■□□ 2.86
RNF144A-205	ENST00000467276	CWC25	Q9NXE8	425 aa	Predicted RBP	32.92	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms