RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 NPHP1O15259 732 aa25.88■■□□□ 1.73
FAM53A-204ENST00000467215 PIP4K2AP48426 406 aaPredicted RBP25.88■■□□□ 1.73
FAM53A-204ENST00000467215 PRPF40BQ6NWY9 871 aaKnown RBP25.88■■□□□ 1.73
FAM53A-204ENST00000467215 POTEIP0CG38 1075 aa25.87■■□□□ 1.73
FAM53A-204ENST00000467215 POTEJP0CG39 1038 aa25.87■■□□□ 1.73
FAM53A-204ENST00000467215 ST5P78524 1137 aa25.86■■□□□ 1.73
FAM53A-204ENST00000467215 DZIP3Q86Y13 1208 aaKnown RBP25.86■■□□□ 1.73
FAM53A-204ENST00000467215 SETDB2Q96T68 719 aa25.86■■□□□ 1.73
FAM53A-204ENST00000467215 SRGNP10124 158 aa25.85■■□□□ 1.73
FAM53A-204ENST00000467215 PRKAR2BP31323 418 aa25.85■■□□□ 1.73
FAM53A-204ENST00000467215 ADAMTSL1Q8N6G6 1762 aa25.84■■□□□ 1.73
FAM53A-204ENST00000467215 DLG5Q8TDM6 1919 aa25.84■■□□□ 1.73
FAM53A-204ENST00000467215 DDNO94850 711 aaPredicted RBP25.84■■□□□ 1.73
FAM53A-204ENST00000467215 STYK1Q6J9G0 422 aa25.84■■□□□ 1.73
FAM53A-204ENST00000467215 NPM2Q86SE8 214 aaKnown RBP25.84■■□□□ 1.73
FAM53A-204ENST00000467215 CNKSR1Q969H4 720 aa25.84■■□□□ 1.73
FAM53A-204ENST00000467215 PHACTR3Q96KR7 559 aa25.84■■□□□ 1.73
FAM53A-204ENST00000467215 PRAMEF22A3QJZ6 481 aa25.83■■□□□ 1.73
FAM53A-204ENST00000467215 BTBD11A6QL63 1104 aa25.83■■□□□ 1.73
FAM53A-204ENST00000467215 RSPH6AQ9H0K4 717 aa25.83■■□□□ 1.73
FAM53A-204ENST00000467215 KDM3BQ7LBC6 1761 aa25.82■■□□□ 1.72
FAM53A-204ENST00000467215 CHADLQ6NUI6 762 aa25.81■■□□□ 1.72
FAM53A-204ENST00000467215 MASTLQ96GX5 879 aa25.81■■□□□ 1.72
FAM53A-204ENST00000467215 USP16Q9Y5T5 823 aa25.81■■□□□ 1.72
FAM53A-204ENST00000467215 MKRN1Q9UHC7 482 aaKnown RBP25.8■■□□□ 1.72
FAM53A-204ENST00000467215 NUP98P52948 1817 aa25.79■■□□□ 1.72
FAM53A-204ENST00000467215 SOGA3Q5TF21 947 aa25.79■■□□□ 1.72
FAM53A-204ENST00000467215 CREBZFQ9NS37 354 aa25.79■■□□□ 1.72
FAM53A-204ENST00000467215 NBPF5PQ86XG9 351 aaPredicted RBP25.78■■□□□ 1.72
FAM53A-204ENST00000467215 CCDC93Q567U6 631 aa25.77■■□□□ 1.72
FAM53A-204ENST00000467215 MCM10Q7L590 875 aa25.76■■□□□ 1.71
FAM53A-204ENST00000467215 ZNF541Q9H0D2 1346 aa25.76■■□□□ 1.71
FAM53A-204ENST00000467215 OLFM4Q6UX06 510 aa25.75■■□□□ 1.71
FAM53A-204ENST00000467215 C7orf43Q8WVR3 580 aa25.75■■□□□ 1.71
FAM53A-204ENST00000467215 ZNF652Q9Y2D9 606 aa25.75■■□□□ 1.71
FAM53A-204ENST00000467215 CNTNAP1P78357 1384 aa25.74■■□□□ 1.71
FAM53A-204ENST00000467215 L3MBTL3Q96JM7 780 aaPredicted RBP25.74■■□□□ 1.71
FAM53A-204ENST00000467215 CFAP53Q96M91 514 aa25.74■■□□□ 1.71
FAM53A-204ENST00000467215 NBPF26B4DH59 902 aa25.73■■□□□ 1.71
FAM53A-204ENST00000467215 NBPF10Q6P3W6 841 aaKnown RBP25.73■■□□□ 1.71
FAM53A-204ENST00000467215 CLEC4GQ6UXB4 293 aa25.73■■□□□ 1.71
FAM53A-204ENST00000467215 NBPF15Q8N660 670 aa25.73■■□□□ 1.71
FAM53A-204ENST00000467215 PASKQ96RG2 1323 aa25.72■■□□□ 1.71
FAM53A-204ENST00000467215 IQCA1LA6NCM1 817 aa25.72■■□□□ 1.71
FAM53A-204ENST00000467215 SNRPA1P09661 255 aaKnown RBP25.72■■□□□ 1.71
FAM53A-204ENST00000467215 NPR1P16066 1061 aa25.72■■□□□ 1.71
FAM53A-204ENST00000467215 FKBP4Q02790 459 aaKnown RBP eCLIP25.72■■□□□ 1.71
FAM53A-204ENST00000467215 DCTN1Q14203 1278 aa25.72■■□□□ 1.71
FAM53A-204ENST00000467215 LDHDQ86WU2 507 aa25.72■■□□□ 1.71
FAM53A-204ENST00000467215 TAF1DQ9H5J8 278 aaPredicted RBP25.72■■□□□ 1.71
FAM53A-204ENST00000467215 ZNF277Q9NRM2 450 aaPredicted RBP25.72■■□□□ 1.71
FAM53A-204ENST00000467215 NIP7Q9Y221 180 aaKnown RBP eCLIP25.72■■□□□ 1.71
FAM53A-204ENST00000467215 SNED1Q8TER0 1413 aa25.71■■□□□ 1.71
FAM53A-204ENST00000467215 ABCC12Q96J65 1359 aa25.71■■□□□ 1.71
FAM53A-204ENST00000467215 FAM177BA6PVY3 158 aa25.71■■□□□ 1.71
FAM53A-204ENST00000467215 LTBP1Q14766 1721 aa25.71■■□□□ 1.71
FAM53A-204ENST00000467215 COL4A5P29400 1685 aa25.71■■□□□ 1.71
FAM53A-204ENST00000467215 RTF1Q92541 710 aaKnown RBP25.7■■□□□ 1.7
FAM53A-204ENST00000467215 KLRG2A4D1S0 409 aaPredicted RBP25.69■■□□□ 1.7
FAM53A-204ENST00000467215 U2AF1L5P0DN76 240 aaPredicted RBP25.69■■□□□ 1.7
FAM53A-204ENST00000467215 U2AF1Q01081 240 aaKnown RBP eCLIP25.69■■□□□ 1.7
FAM53A-204ENST00000467215 EAPPQ56P03 285 aaPredicted RBP25.68■■□□□ 1.7
FAM53A-204ENST00000467215 RNF123Q5XPI4 1314 aa25.67■■□□□ 1.7
FAM53A-204ENST00000467215 FOXN1O15353 648 aa25.67■■□□□ 1.7
FAM53A-204ENST00000467215 NUDCQ9Y266 331 aa25.67■■□□□ 1.7
FAM53A-204ENST00000467215 HLFQ16534 295 aa25.66■■□□□ 1.7
FAM53A-204ENST00000467215 TPTE2Q6XPS3 522 aa25.66■■□□□ 1.7
FAM53A-204ENST00000467215 THSD7BQ9C0I4 1608 aa25.65■■□□□ 1.7
FAM53A-204ENST00000467215 RGL2O15211 777 aa25.64■■□□□ 1.7
FAM53A-204ENST00000467215 PPP2R1AP30153 589 aa25.64■■□□□ 1.7
FAM53A-204ENST00000467215 HACL1Q9UJ83 578 aa25.64■■□□□ 1.7
FAM53A-204ENST00000467215 ITGBL1O95965 494 aaPredicted RBP25.63■■□□□ 1.69
FAM53A-204ENST00000467215 IARSP41252 1262 aaKnown RBP25.63■■□□□ 1.69
FAM53A-204ENST00000467215 TRPM7Q96QT4 1865 aa25.63■■□□□ 1.69
FAM53A-204ENST00000467215 TMEM88BA6NKF7 163 aa25.62■■□□□ 1.69
FAM53A-204ENST00000467215 EPHX2P34913 555 aa25.62■■□□□ 1.69
FAM53A-204ENST00000467215 RTKN2Q8IZC4 609 aa25.62■■□□□ 1.69
FAM53A-204ENST00000467215 RIC1Q4ADV7 1423 aa25.62■■□□□ 1.69
FAM53A-204ENST00000467215 LAMB2P55268 1798 aa25.61■■□□□ 1.69
FAM53A-204ENST00000467215 ANKRD36CQ5JPF3 1778 aa25.61■■□□□ 1.69
FAM53A-204ENST00000467215 VEGFBP49765 207 aa25.61■■□□□ 1.69
FAM53A-204ENST00000467215 NUTM1Q86Y26 1132 aa25.61■■□□□ 1.69
FAM53A-204ENST00000467215 MIS18AQ9NYP9 233 aa25.61■■□□□ 1.69
FAM53A-204ENST00000467215 FZD9O00144 591 aa25.6■■□□□ 1.69
FAM53A-204ENST00000467215 SLC51AQ86UW1 340 aa25.6■■□□□ 1.69
FAM53A-204ENST00000467215 SYNE4Q8N205 404 aa25.6■■□□□ 1.69
FAM53A-204ENST00000467215 CLEC11AQ9Y240 323 aa25.6■■□□□ 1.69
FAM53A-204ENST00000467215 GTF2E1P29083 439 aaPredicted RBP25.59■■□□□ 1.69
FAM53A-204ENST00000467215 CRY2Q49AN0 593 aa25.59■■□□□ 1.69
FAM53A-204ENST00000467215 HTATSF1O43719 755 aaKnown RBP25.58■■□□□ 1.69
FAM53A-204ENST00000467215 ALDH1B1P30837 517 aa25.58■■□□□ 1.69
FAM53A-204ENST00000467215 TAF7Q15545 349 aaPredicted RBP25.58■■□□□ 1.69
FAM53A-204ENST00000467215 MAP1SQ66K74 1059 aaPredicted RBP25.58■■□□□ 1.69
FAM53A-204ENST00000467215 NGEFQ8N5V2 710 aa25.58■■□□□ 1.69
FAM53A-204ENST00000467215 IBTKQ9P2D0 1353 aaPredicted RBP25.57■■□□□ 1.68
FAM53A-204ENST00000467215 UBN2Q6ZU65 1347 aa25.57■■□□□ 1.68
FAM53A-204ENST00000467215 GPC2Q8N158 579 aa25.56■■□□□ 1.68
FAM53A-204ENST00000467215 AIDAQ96BJ3 306 aa25.56■■□□□ 1.68
FAM53A-204ENST00000467215 PSMD1Q99460 953 aa25.56■■□□□ 1.68
FAM53A-204ENST00000467215 MAP3K15Q6ZN16 1313 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms