RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 DCTPP1Q9H773 170 aa11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 PHAXQ9H814 394 aaKnown RBP11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 DDX21Q9NR30 783 aaKnown RBP eCLIP11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 COL14A1Q05707 1796 aaKnown RBP11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
APOBEC1-202ENST00000467171 GNAI2P04899 355 aa11.94□□□□□ -0.5
APOBEC1-202ENST00000467171 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
APOBEC1-202ENST00000467171 DNAAF4Q8WXU2 420 aa11.94□□□□□ -0.5
APOBEC1-202ENST00000467171 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
APOBEC1-202ENST00000467171 ZFP91Q96JP5 570 aaPredicted RBP11.94□□□□□ -0.5
APOBEC1-202ENST00000467171 C1orf115Q9H7X2 142 aa11.94□□□□□ -0.5
APOBEC1-202ENST00000467171 COL16A1Q07092 1604 aaPredicted RBP11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 SIPA1L3O60292 1781 aaPredicted RBP11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 HMMRO75330 724 aa11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 SLC39A6Q13433 755 aa11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 PDIA6Q15084 440 aa11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 C8orf34Q49A92 452 aa11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 BEND3Q5T5X7 828 aa11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 CHD1LQ86WJ1 897 aa11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 SRCIN1Q9C0H9 1055 aa11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 THRAP3Q9Y2W1 955 aaKnown RBP11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 PARP4Q9UKK3 1724 aaKnown RBP11.93□□□□□ -0.5
APOBEC1-202ENST00000467171 ALDH1L1O75891 902 aa11.92□□□□□ -0.5
APOBEC1-202ENST00000467171 KSR2Q6VAB6 950 aa11.92□□□□□ -0.5
APOBEC1-202ENST00000467171 PRAMEF22A3QJZ6 481 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 PI4KAP2A4QPH2 592 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 UBAP1LF5GYI3 381 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 DDX58O95786 925 aaKnown RBP11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 PI4KAP1Q8N8J0 262 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 SCN11AQ9UI33 1791 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 TNS2Q63HR2 1409 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 ADCY9O60503 1353 aa11.91□□□□□ -0.5
APOBEC1-202ENST00000467171 PIP4K2BP78356 416 aa11.9□□□□□ -0.5
APOBEC1-202ENST00000467171 ATP8B2P98198 1209 aa11.9□□□□□ -0.5
APOBEC1-202ENST00000467171 PROSER3Q2NL68 480 aa11.9□□□□□ -0.5
APOBEC1-202ENST00000467171 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
APOBEC1-202ENST00000467171 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
APOBEC1-202ENST00000467171 DDX54Q8TDD1 881 aaKnown RBP11.9□□□□□ -0.5
APOBEC1-202ENST00000467171 HDAC5Q9UQL6 1122 aa11.9□□□□□ -0.5
APOBEC1-202ENST00000467171 SPATA31A1Q5TZJ5 1347 aa11.89□□□□□ -0.51
APOBEC1-202ENST00000467171 CACNA1FO60840 1977 aa11.89□□□□□ -0.51
APOBEC1-202ENST00000467171 EXOC5O00471 708 aa11.89□□□□□ -0.51
APOBEC1-202ENST00000467171 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
APOBEC1-202ENST00000467171 SLIT2O94813 1529 aa11.89□□□□□ -0.51
APOBEC1-202ENST00000467171 JCADQ9P266 1359 aa11.89□□□□□ -0.51
APOBEC1-202ENST00000467171 ADAMTS2O95450 1211 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 ANXA1P04083 346 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 LINS1Q8NG48 757 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 TMOD3Q9NYL9 352 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 USP35Q9P2H5 1018 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 MAP3K2Q9Y2U5 619 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 USP16Q9Y5T5 823 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
APOBEC1-202ENST00000467171 UTYO14607 1347 aa11.87□□□□□ -0.51
APOBEC1-202ENST00000467171 SPATA31A5Q5VU36 1347 aa11.87□□□□□ -0.51
APOBEC1-202ENST00000467171 SPATA31A7Q8IWB4 1347 aa11.87□□□□□ -0.51
APOBEC1-202ENST00000467171 ANP32AP39687 249 aaKnown RBP11.87□□□□□ -0.51
APOBEC1-202ENST00000467171 VSIG10Q8N0Z9 540 aa11.87□□□□□ -0.51
APOBEC1-202ENST00000467171 MTX1Q13505 466 aa11.86□□□□□ -0.51
APOBEC1-202ENST00000467171 BMP2KLQ5H9B9 411 aa11.86□□□□□ -0.51
APOBEC1-202ENST00000467171 SSH3Q8TE77 659 aa11.86□□□□□ -0.51
APOBEC1-202ENST00000467171 TEX13AQ9BXU3 409 aaPredicted RBP11.86□□□□□ -0.51
APOBEC1-202ENST00000467171 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
APOBEC1-202ENST00000467171 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
APOBEC1-202ENST00000467171 EMP3P54852 163 aa11.85□□□□□ -0.51
APOBEC1-202ENST00000467171 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
APOBEC1-202ENST00000467171 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
APOBEC1-202ENST00000467171 XAGE3Q8WTP9 111 aa11.85□□□□□ -0.51
APOBEC1-202ENST00000467171 PIGBQ92521 554 aa11.85□□□□□ -0.51
APOBEC1-202ENST00000467171 METTL22Q9BUU2 404 aaPredicted RBP11.85□□□□□ -0.51
APOBEC1-202ENST00000467171 LRP6O75581 1613 aa11.85□□□□□ -0.51
APOBEC1-202ENST00000467171 SPATA31A6Q5VVP1 1343 aa11.85□□□□□ -0.51
APOBEC1-202ENST00000467171 PLCH1Q4KWH8 1693 aa11.84□□□□□ -0.51
APOBEC1-202ENST00000467171 GLI3P10071 1580 aa11.84□□□□□ -0.51
APOBEC1-202ENST00000467171 NEXNQ0ZGT2 675 aa11.84□□□□□ -0.51
APOBEC1-202ENST00000467171 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
APOBEC1-202ENST00000467171 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
APOBEC1-202ENST00000467171 UNC5CLQ8IV45 518 aa11.84□□□□□ -0.51
APOBEC1-202ENST00000467171 PLBD2Q8NHP8 589 aa11.84□□□□□ -0.51
APOBEC1-202ENST00000467171 N4BP2Q86UW6 1770 aaPredicted RBP11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 NUTM2BA6NNL0 878 aaPredicted RBP11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 NUTM2EB1AL46 878 aaPredicted RBP11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 NBPF26B4DH59 902 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 GRM8O00222 908 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 IGKV5-2P06315 115 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 NBPF7P0C2Y1 421 aaPredicted RBP11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 VPS72Q15906 364 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 DDB1Q16531 1140 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 NBPF14Q5TI25 921 aa11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 NBPF10Q6P3W6 841 aaKnown RBP11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
APOBEC1-202ENST00000467171 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms