RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
SFXN3-204ENST00000466982 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
SFXN3-204ENST00000466982 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.09□□□□□ -0.31
SFXN3-204ENST00000466982 ZNF397Q8NF99 534 aaPredicted RBP13.09□□□□□ -0.31
SFXN3-204ENST00000466982 FAM200AQ8TCP9 573 aa13.09□□□□□ -0.31
SFXN3-204ENST00000466982 TRIM5Q9C035 493 aa13.09□□□□□ -0.31
SFXN3-204ENST00000466982 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
SFXN3-204ENST00000466982 ZNF446Q9NWS9 450 aa13.09□□□□□ -0.31
SFXN3-204ENST00000466982 PAXBP1Q9Y5B6 917 aa13.09□□□□□ -0.31
SFXN3-204ENST00000466982 FAM135BQ49AJ0 1406 aa13.09□□□□□ -0.31
SFXN3-204ENST00000466982 ADGRB1O14514 1584 aa13.08□□□□□ -0.32
SFXN3-204ENST00000466982 ANAPC15P60006 121 aa13.08□□□□□ -0.32
SFXN3-204ENST00000466982 DEPDC5O75140 1603 aa13.08□□□□□ -0.32
SFXN3-204ENST00000466982 KIF1BO60333 1816 aa13.08□□□□□ -0.32
SFXN3-204ENST00000466982 LARGE1O95461 756 aa13.08□□□□□ -0.32
SFXN3-204ENST00000466982 CASQ1P31415 396 aa13.08□□□□□ -0.32
SFXN3-204ENST00000466982 CBX8Q9HC52 389 aa13.08□□□□□ -0.32
SFXN3-204ENST00000466982 FAM53CQ9NYF3 392 aa13.08□□□□□ -0.32
SFXN3-204ENST00000466982 LIG1P18858 919 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 AK2P54819 239 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 TYRO3Q06418 890 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 FAM173BQ6P4H8 233 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 ESF1Q9H501 851 aaKnown RBP13.07□□□□□ -0.32
SFXN3-204ENST00000466982 TOMM22Q9NS69 142 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 SIGLEC1Q9BZZ2 1709 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 IFT172Q9UG01 1749 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 TDO2P48775 406 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 GYS2P54840 703 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 ANO6Q4KMQ2 910 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 GTF3C6Q969F1 213 aa13.07□□□□□ -0.32
SFXN3-204ENST00000466982 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
SFXN3-204ENST00000466982 MAP4K4O95819 1239 aaPredicted RBP13.06□□□□□ -0.32
SFXN3-204ENST00000466982 ZNF75DP51815 510 aa13.06□□□□□ -0.32
SFXN3-204ENST00000466982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.06□□□□□ -0.32
SFXN3-204ENST00000466982 MED4Q9NPJ6 270 aa13.06□□□□□ -0.32
SFXN3-204ENST00000466982 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
SFXN3-204ENST00000466982 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
SFXN3-204ENST00000466982 SMC3Q9UQE7 1217 aa13.06□□□□□ -0.32
SFXN3-204ENST00000466982 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
SFXN3-204ENST00000466982 ERBB3P21860 1342 aa13.06□□□□□ -0.32
SFXN3-204ENST00000466982 SETBP1Q9Y6X0 1596 aa13.06□□□□□ -0.32
SFXN3-204ENST00000466982 NBPF9Q3BBW0 867 aa13.05□□□□□ -0.32
SFXN3-204ENST00000466982 DNAJC21Q5F1R6 531 aaKnown RBP13.05□□□□□ -0.32
SFXN3-204ENST00000466982 SLC4A10Q6U841 1118 aa13.05□□□□□ -0.32
SFXN3-204ENST00000466982 CCDC189A1A4V9 331 aa13.05□□□□□ -0.32
SFXN3-204ENST00000466982 F6X3S4 739 aa13.05□□□□□ -0.32
SFXN3-204ENST00000466982 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
SFXN3-204ENST00000466982 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
SFXN3-204ENST00000466982 AGLP35573 1532 aa13.05□□□□□ -0.32
SFXN3-204ENST00000466982 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-204ENST00000466982 TTC36A6NLP5 189 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 HSPA4P34932 840 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 SETQ01105 290 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-204ENST00000466982 MAP3K11Q16584 847 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 PLA2G4DQ86XP0 818 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 VWDEQ8N2E2 1590 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 MNS1Q8NEH6 495 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
SFXN3-204ENST00000466982 CXorf56Q9H5V9 222 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 SUFUQ9UMX1 484 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 MTMR6Q9Y217 621 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 SALL3Q9BXA9 1300 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 GJB2P29033 226 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
SFXN3-204ENST00000466982 NOL10Q9BSC4 688 aaKnown RBP13.04□□□□□ -0.32
SFXN3-204ENST00000466982 LRRN4CLQ8ND94 238 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 TTC14Q96N46 770 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 MINK1Q8N4C8 1332 aaPredicted RBP13.03□□□□□ -0.32
SFXN3-204ENST00000466982 HMGB1P09429 215 aaKnown RBP13.03□□□□□ -0.32
SFXN3-204ENST00000466982 NBPF10Q6P3W6 841 aaKnown RBP13.03□□□□□ -0.32
SFXN3-204ENST00000466982 DDX54Q8TDD1 881 aaKnown RBP13.03□□□□□ -0.32
SFXN3-204ENST00000466982 KIF1BPQ96EK5 621 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 SNX14Q9Y5W7 946 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 ABCC3O15438 1527 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 MUM1L1Q5H9M0 696 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 DACT1Q9NYF0 836 aa13.03□□□□□ -0.32
SFXN3-204ENST00000466982 PTPN14Q15678 1187 aa13.02□□□□□ -0.32
SFXN3-204ENST00000466982 C10orf67Q8IYJ2 551 aa13.02□□□□□ -0.32
SFXN3-204ENST00000466982 NFATC2IPQ8NCF5 419 aa13.02□□□□□ -0.32
SFXN3-204ENST00000466982 DNAJC25Q9H1X3 360 aa13.02□□□□□ -0.32
SFXN3-204ENST00000466982 RBM28Q9NW13 759 aaKnown RBP13.02□□□□□ -0.32
SFXN3-204ENST00000466982 LIMCH1Q9UPQ0 1083 aa13.02□□□□□ -0.32
SFXN3-204ENST00000466982 ATP6V1DQ9Y5K8 247 aa13.02□□□□□ -0.32
SFXN3-204ENST00000466982 NEURL4Q96JN8 1562 aa13.02□□□□□ -0.33
SFXN3-204ENST00000466982 MYO1CO00159 1063 aa13.02□□□□□ -0.33
SFXN3-204ENST00000466982 HMMRO75330 724 aa13.02□□□□□ -0.33
SFXN3-204ENST00000466982 ERCC6LQ2NKX8 1250 aa13.02□□□□□ -0.33
SFXN3-204ENST00000466982 PUS7Q96PZ0 661 aaKnown RBP13.02□□□□□ -0.33
SFXN3-204ENST00000466982 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
SFXN3-204ENST00000466982 PNMA6EA0A0J9YXQ4 647 aa13.01□□□□□ -0.33
SFXN3-204ENST00000466982 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
SFXN3-204ENST00000466982 G2E3Q7L622 706 aa13.01□□□□□ -0.33
SFXN3-204ENST00000466982 LRRC8AQ8IWT6 810 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms