RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 COL8A1P27658 744 aa6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 PSMA6P60900 246 aaKnown RBP6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 LAMC2Q13753 1193 aa6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 ZNF468Q5VIY5 522 aaPredicted RBP6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 BEND7Q8N7W2 519 aaPredicted RBP6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 TSEN2Q8NCE0 465 aaKnown RBP6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 ZNF594Q96JF6 807 aaPredicted RBP6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 SPOCK3Q9BQ16 436 aa6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 SERTM1A2A2V5 107 aa6.88□□□□□ -1.31
GTF3C3-209ENST00000466862 SFI1A8K8P3 1242 aa6.88□□□□□ -1.31
GTF3C3-209ENST00000466862 NEURL1BA8MQ27 555 aa6.88□□□□□ -1.31
GTF3C3-209ENST00000466862 MKL2Q9ULH7 1088 aa6.88□□□□□ -1.31
GTF3C3-209ENST00000466862 MSTNO14793 375 aa6.87□□□□□ -1.31
GTF3C3-209ENST00000466862 ADH6P28332 368 aa6.87□□□□□ -1.31
GTF3C3-209ENST00000466862 GRIN2CQ14957 1233 aa6.87□□□□□ -1.31
GTF3C3-209ENST00000466862 C1orf53Q5VUE5 145 aa6.87□□□□□ -1.31
GTF3C3-209ENST00000466862 BICDL1Q6ZP65 573 aa6.87□□□□□ -1.31
GTF3C3-209ENST00000466862 TFIP11Q9UBB9 837 aaKnown RBP6.87□□□□□ -1.31
GTF3C3-209ENST00000466862 KRBA1A5PL33 1030 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 ADAM23O75077 832 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 CRTC2Q53ET0 693 aaPredicted RBP6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 KANK4Q5T7N3 995 aaPredicted RBP6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 CHSY3Q70JA7 882 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 STAG2Q8N3U4 1231 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 HSH2DQ96JZ2 352 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 BTBD6Q96KE9 485 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 PPP1R12CQ9BZL4 782 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 SUV39H2Q9H5I1 410 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 MARK1Q9P0L2 795 aa6.86□□□□□ -1.31
GTF3C3-209ENST00000466862 TYRO3Q06418 890 aa6.85□□□□□ -1.31
GTF3C3-209ENST00000466862 PTK7Q13308 1070 aa6.85□□□□□ -1.31
GTF3C3-209ENST00000466862 LRRC69Q6ZNQ3 347 aa6.85□□□□□ -1.31
GTF3C3-209ENST00000466862 RHPN1Q8TCX5 695 aa6.85□□□□□ -1.31
GTF3C3-209ENST00000466862 PHACTR1Q9C0D0 580 aa6.85□□□□□ -1.31
GTF3C3-209ENST00000466862 ZNF232Q9UNY5 417 aa6.85□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L15C9J2P7 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L10C9JJH3 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L13C9JLJ4 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L12C9JPN9 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L11C9JVI0 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L21D6R901 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L18D6R9N7 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L22D6RA61 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L17D6RBQ6 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L19D6RCP7 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L20D6RJB6 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 PCBP4P57723 403 aaKnown RBP6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 USP17L24Q0WX57 530 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 ALYREFQ86V81 257 aaKnown RBP6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 C2orf49Q9BVC5 232 aaPredicted RBP6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 GJA3Q9Y6H8 435 aa6.84□□□□□ -1.31
GTF3C3-209ENST00000466862 FAM196BA6NMK8 535 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 GNB5O14775 395 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 RASA1P20936 1047 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 SEC13P55735 322 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 KCNQ4P56696 695 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 SFSWAPQ12872 951 aaKnown RBP6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 CFAP70Q5T0N1 1121 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 ZNF280CQ8ND82 737 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 ARXQ96QS3 562 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 SLC30A3Q99726 388 aa6.83□□□□□ -1.32
GTF3C3-209ENST00000466862 PPP1R12BO60237 982 aaPredicted RBP6.82□□□□□ -1.32
GTF3C3-209ENST00000466862 AMPD1P23109 780 aa6.82□□□□□ -1.32
GTF3C3-209ENST00000466862 SYT9Q86SS6 491 aa6.82□□□□□ -1.32
GTF3C3-209ENST00000466862 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
GTF3C3-209ENST00000466862 RRAGCQ9HB90 399 aa6.82□□□□□ -1.32
GTF3C3-209ENST00000466862 SIN3BO75182 1162 aa6.81□□□□□ -1.32
GTF3C3-209ENST00000466862 ALDH16A1Q8IZ83 802 aa6.81□□□□□ -1.32
GTF3C3-209ENST00000466862 TNFRSF25Q93038 417 aa6.81□□□□□ -1.32
GTF3C3-209ENST00000466862 TRIM11Q96F44 468 aa6.81□□□□□ -1.32
GTF3C3-209ENST00000466862 SUSD3Q96L08 255 aa6.81□□□□□ -1.32
GTF3C3-209ENST00000466862 HCN4Q9Y3Q4 1203 aa6.81□□□□□ -1.32
GTF3C3-209ENST00000466862 ELOA3CA0A087WX78 387 aaPredicted RBP6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 ELOA3DA6NLF2 546 aaPredicted RBP6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 ADARB2-AS1A8MUL3 147 aa6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 DPYDQ12882 1025 aa6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 ELOA3BQ3SY89 546 aa6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 ELOA3Q8NG57 546 aa6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 GAS2L2Q8NHY3 880 aa6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 SCG3Q8WXD2 468 aaKnown RBP6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 BRD7Q9NPI1 651 aa6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 ATAD2Q6PL18 1390 aa6.8□□□□□ -1.32
GTF3C3-209ENST00000466862 SPEM2Q0P670 501 aa6.79□□□□□ -1.32
GTF3C3-209ENST00000466862 COL9A3Q14050 684 aaPredicted RBP6.79□□□□□ -1.32
GTF3C3-209ENST00000466862 ANKMY2Q8IV38 441 aa6.79□□□□□ -1.32
GTF3C3-209ENST00000466862 PRR12Q9ULL5 1215 aa6.79□□□□□ -1.32
GTF3C3-209ENST00000466862 BCS1LQ9Y276 419 aa6.79□□□□□ -1.32
GTF3C3-209ENST00000466862 CHMP3Q9Y3E7 222 aa6.79□□□□□ -1.32
GTF3C3-209ENST00000466862 IGFBP4P22692 258 aa6.78□□□□□ -1.32
GTF3C3-209ENST00000466862 GRNP28799 593 aaKnown RBP6.78□□□□□ -1.32
GTF3C3-209ENST00000466862 IER5Q5VY09 327 aa6.78□□□□□ -1.32
GTF3C3-209ENST00000466862 LARP1Q6PKG0 1096 aaKnown RBP6.78□□□□□ -1.32
GTF3C3-209ENST00000466862 RAB44Q7Z6P3 723 aaPredicted RBP6.78□□□□□ -1.32
GTF3C3-209ENST00000466862 DMGDHQ9UI17 866 aaKnown RBP6.78□□□□□ -1.32
GTF3C3-209ENST00000466862 STARD13Q9Y3M8 1113 aa6.78□□□□□ -1.32
GTF3C3-209ENST00000466862 LMOD1P29536 600 aaPredicted RBP6.77□□□□□ -1.33
GTF3C3-209ENST00000466862 RTN1Q16799 776 aa6.77□□□□□ -1.33
GTF3C3-209ENST00000466862 BTLAQ7Z6A9 289 aa6.77□□□□□ -1.33
GTF3C3-209ENST00000466862 NOP53Q9NZM5 478 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-209ENST00000466862 ANKIB1Q9P2G1 1089 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms