RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ZNF594Q96JF6 807 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-212ENST00000466845 PHF20L1A8MW92 1017 aa8.54□□□□□ -1.04
LRCH3-212ENST00000466845 IGSF3O75054 1194 aa8.54□□□□□ -1.04
LRCH3-212ENST00000466845 HMGB1P09429 215 aaKnown RBP8.54□□□□□ -1.04
LRCH3-212ENST00000466845 ARAFP10398 606 aa8.54□□□□□ -1.04
LRCH3-212ENST00000466845 TNP2Q05952 138 aa8.54□□□□□ -1.04
LRCH3-212ENST00000466845 NEDD1Q8NHV4 660 aa8.54□□□□□ -1.04
LRCH3-212ENST00000466845 ABHD17AQ96GS6 310 aa8.54□□□□□ -1.04
LRCH3-212ENST00000466845 ATAD2Q6PL18 1390 aa8.53□□□□□ -1.04
LRCH3-212ENST00000466845 TAF7LQ5H9L4 462 aa8.53□□□□□ -1.04
LRCH3-212ENST00000466845 ANKMY2Q8IV38 441 aa8.53□□□□□ -1.04
LRCH3-212ENST00000466845 TSPAN10Q9H1Z9 355 aaPredicted RBP8.53□□□□□ -1.04
LRCH3-212ENST00000466845 PARP3Q9Y6F1 533 aa8.53□□□□□ -1.04
LRCH3-212ENST00000466845 SFI1A8K8P3 1242 aa8.52□□□□□ -1.05
LRCH3-212ENST00000466845 PPP1R12BO60237 982 aaPredicted RBP8.52□□□□□ -1.05
LRCH3-212ENST00000466845 MAPTP10636 758 aaKnown RBP8.52□□□□□ -1.05
LRCH3-212ENST00000466845 HSP90B1P14625 803 aaKnown RBP8.52□□□□□ -1.05
LRCH3-212ENST00000466845 TXLNAP40222 546 aa8.52□□□□□ -1.05
LRCH3-212ENST00000466845 PODNQ7Z5L7 613 aa8.52□□□□□ -1.05
LRCH3-212ENST00000466845 ABCC9O60706 1549 aa8.52□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L15C9J2P7 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L10C9JJH3 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L13C9JLJ4 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L12C9JPN9 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L11C9JVI0 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L21D6R901 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L18D6R9N7 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L22D6RA61 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L17D6RBQ6 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L19D6RCP7 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L20D6RJB6 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 PIK3R2O00459 728 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 KHNYNO15037 678 aaKnown RBP8.51□□□□□ -1.05
LRCH3-212ENST00000466845 USP17L24Q0WX57 530 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 DPYDQ12882 1025 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 DHX37Q8IY37 1157 aaKnown RBP8.51□□□□□ -1.05
LRCH3-212ENST00000466845 TSEN2Q8NCE0 465 aaKnown RBP8.51□□□□□ -1.05
LRCH3-212ENST00000466845 RHPN1Q8TCX5 695 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 MARK1Q9P0L2 795 aa8.51□□□□□ -1.05
LRCH3-212ENST00000466845 NEFLP07196 543 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 IGFBP4P22692 258 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 CTBSQ01459 385 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 CRTC2Q53ET0 693 aaPredicted RBP8.5□□□□□ -1.05
LRCH3-212ENST00000466845 CFAP70Q5T0N1 1121 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 SLCO4C1Q6ZQN7 724 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 TMEM151AQ8N4L1 468 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 GALNT6Q8NCL4 622 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 EDARADDQ8WWZ3 215 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 HINFPQ9BQA5 517 aa8.5□□□□□ -1.05
LRCH3-212ENST00000466845 C2orf49Q9BVC5 232 aaPredicted RBP8.5□□□□□ -1.05
LRCH3-212ENST00000466845 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.5□□□□□ -1.05
LRCH3-212ENST00000466845 EFSO43281 561 aa8.49□□□□□ -1.05
LRCH3-212ENST00000466845 RASSF7Q02833 373 aa8.49□□□□□ -1.05
LRCH3-212ENST00000466845 TBCELQ5QJ74 424 aa8.49□□□□□ -1.05
LRCH3-212ENST00000466845 FAM200AQ8TCP9 573 aa8.49□□□□□ -1.05
LRCH3-212ENST00000466845 SCG3Q8WXD2 468 aaKnown RBP8.49□□□□□ -1.05
LRCH3-212ENST00000466845 C2CD2LO14523 706 aa8.48□□□□□ -1.05
LRCH3-212ENST00000466845 RFX1P22670 979 aa8.48□□□□□ -1.05
LRCH3-212ENST00000466845 ADH6P28332 368 aa8.48□□□□□ -1.05
LRCH3-212ENST00000466845 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
LRCH3-212ENST00000466845 PHACTR1Q9C0D0 580 aa8.48□□□□□ -1.05
LRCH3-212ENST00000466845 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
LRCH3-212ENST00000466845 HCN4Q9Y3Q4 1203 aa8.48□□□□□ -1.05
LRCH3-212ENST00000466845 CCDC9Q9Y3X0 531 aaKnown RBP8.48□□□□□ -1.05
LRCH3-212ENST00000466845 DNMT3AQ9Y6K1 912 aaPredicted RBP8.48□□□□□ -1.05
LRCH3-212ENST00000466845 DCDC2BA2VCK2 349 aa8.47□□□□□ -1.05
LRCH3-212ENST00000466845 C21orf2O43822 256 aa8.47□□□□□ -1.05
LRCH3-212ENST00000466845 GDF11O95390 407 aa8.47□□□□□ -1.05
LRCH3-212ENST00000466845 NEUROD1Q13562 356 aa8.47□□□□□ -1.05
LRCH3-212ENST00000466845 ELOAQ14241 798 aaKnown RBP8.47□□□□□ -1.05
LRCH3-212ENST00000466845 LRRC69Q6ZNQ3 347 aa8.47□□□□□ -1.05
LRCH3-212ENST00000466845 GGA1Q9UJY5 639 aa8.47□□□□□ -1.05
LRCH3-212ENST00000466845 PRR12Q9ULL5 1215 aa8.47□□□□□ -1.05
LRCH3-212ENST00000466845 FOXO3O43524 673 aa8.46□□□□□ -1.06
LRCH3-212ENST00000466845 ALDH16A1Q8IZ83 802 aa8.46□□□□□ -1.06
LRCH3-212ENST00000466845 SERPINA10Q9UK55 444 aa8.46□□□□□ -1.06
LRCH3-212ENST00000466845 MKL2Q9ULH7 1088 aa8.46□□□□□ -1.06
LRCH3-212ENST00000466845 EPXP11678 715 aa8.45□□□□□ -1.06
LRCH3-212ENST00000466845 GSK3AP49840 483 aa8.45□□□□□ -1.06
LRCH3-212ENST00000466845 KCNQ4P56696 695 aa8.45□□□□□ -1.06
LRCH3-212ENST00000466845 SWI5Q1ZZU3 235 aa8.45□□□□□ -1.06
LRCH3-212ENST00000466845 ZNF468Q5VIY5 522 aaPredicted RBP8.45□□□□□ -1.06
LRCH3-212ENST00000466845 CD33P20138 364 aa8.44□□□□□ -1.06
LRCH3-212ENST00000466845 IRS1P35568 1242 aa8.44□□□□□ -1.06
LRCH3-212ENST00000466845 RTN1Q16799 776 aa8.44□□□□□ -1.06
LRCH3-212ENST00000466845 IER5Q5VY09 327 aa8.44□□□□□ -1.06
LRCH3-212ENST00000466845 CHMP7Q8WUX9 453 aaPredicted RBP8.44□□□□□ -1.06
LRCH3-212ENST00000466845 SUSD3Q96L08 255 aa8.44□□□□□ -1.06
LRCH3-212ENST00000466845 PUS7Q96PZ0 661 aaKnown RBP8.44□□□□□ -1.06
LRCH3-212ENST00000466845 WEE1P30291 646 aa8.43□□□□□ -1.06
LRCH3-212ENST00000466845 SH3PXD2AQ5TCZ1 1133 aa8.43□□□□□ -1.06
LRCH3-212ENST00000466845 VTI1AQ96AJ9 217 aa8.43□□□□□ -1.06
LRCH3-212ENST00000466845 BTBD6Q96KE9 485 aa8.43□□□□□ -1.06
LRCH3-212ENST00000466845 CEP63Q96MT8 703 aa8.43□□□□□ -1.06
LRCH3-212ENST00000466845 C11orf16Q9NQ32 467 aa8.43□□□□□ -1.06
LRCH3-212ENST00000466845 NEURL1BA8MQ27 555 aa8.42□□□□□ -1.06
LRCH3-212ENST00000466845 SIN3BO75182 1162 aa8.42□□□□□ -1.06
LRCH3-212ENST00000466845 IGHA1P01876 353 aa8.42□□□□□ -1.06
LRCH3-212ENST00000466845 ALAS2P22557 587 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms