RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 OS9Q13438 667 aaPredicted RBP25.14■■□□□ 1.62
CCDC78-207ENST00000466708 KIF2CQ99661 725 aa25.14■■□□□ 1.62
CCDC78-207ENST00000466708 BICC1Q9H694 974 aaKnown RBP25.14■■□□□ 1.62
CCDC78-207ENST00000466708 COL15A1P39059 1388 aa25.14■■□□□ 1.62
CCDC78-207ENST00000466708 NBPF26B4DH59 902 aa25.14■■□□□ 1.61
CCDC78-207ENST00000466708 NBPF14Q5TI25 921 aa25.14■■□□□ 1.61
CCDC78-207ENST00000466708 NBPF10Q6P3W6 841 aaKnown RBP25.14■■□□□ 1.61
CCDC78-207ENST00000466708 NBPF15Q8N660 670 aa25.14■■□□□ 1.61
CCDC78-207ENST00000466708 USP26Q9BXU7 913 aa25.14■■□□□ 1.61
CCDC78-207ENST00000466708 ERC2O15083 957 aa25.13■■□□□ 1.61
CCDC78-207ENST00000466708 PIP4K2AP48426 406 aaPredicted RBP25.13■■□□□ 1.61
CCDC78-207ENST00000466708 PHLPP1O60346 1717 aa25.13■■□□□ 1.61
CCDC78-207ENST00000466708 PTCD1O75127 700 aaKnown RBP25.12■■□□□ 1.61
CCDC78-207ENST00000466708 TEX13AQ9BXU3 409 aaPredicted RBP25.12■■□□□ 1.61
CCDC78-207ENST00000466708 AFDNP55196 1824 aaKnown RBP25.12■■□□□ 1.61
CCDC78-207ENST00000466708 TSHZ3Q63HK5 1081 aa25.12■■□□□ 1.61
CCDC78-207ENST00000466708 VSIG10Q8N0Z9 540 aa25.12■■□□□ 1.61
CCDC78-207ENST00000466708 USP42Q9H9J4 1324 aaKnown RBP25.11■■□□□ 1.61
CCDC78-207ENST00000466708 NUTM1Q86Y26 1132 aa25.11■■□□□ 1.61
CCDC78-207ENST00000466708 CLASRPQ8N2M8 674 aaKnown RBP25.11■■□□□ 1.61
CCDC78-207ENST00000466708 LRP6O75581 1613 aa25.11■■□□□ 1.61
CCDC78-207ENST00000466708 TTC41PQ6P2S7 1318 aa25.1■■□□□ 1.61
CCDC78-207ENST00000466708 TRIM6-TRIM34B2RNG4 842 aa25.09■■□□□ 1.61
CCDC78-207ENST00000466708 EXOC5O00471 708 aa25.09■■□□□ 1.61
CCDC78-207ENST00000466708 CDCA7Q9BWT1 371 aaPredicted RBP25.09■■□□□ 1.61
CCDC78-207ENST00000466708 ANTXR1Q9H6X2 564 aa25.09■■□□□ 1.61
CCDC78-207ENST00000466708 WNK3Q9BYP7 1800 aa25.08■■□□□ 1.61
CCDC78-207ENST00000466708 A1BGP04217 495 aa25.08■■□□□ 1.61
CCDC78-207ENST00000466708 G3BP1Q13283 466 aaKnown RBP eCLIP25.08■■□□□ 1.61
CCDC78-207ENST00000466708 PI4K2BQ8TCG2 481 aa25.08■■□□□ 1.61
CCDC78-207ENST00000466708 PIGBQ92521 554 aa25.08■■□□□ 1.61
CCDC78-207ENST00000466708 RILPL2Q969X0 211 aa25.08■■□□□ 1.61
CCDC78-207ENST00000466708 ITGB4P16144 1822 aa25.08■■□□□ 1.61
CCDC78-207ENST00000466708 PA2G4Q9UQ80 394 aaKnown RBP25.07■■□□□ 1.6
CCDC78-207ENST00000466708 NFKBIBQ15653 356 aa25.07■■□□□ 1.6
CCDC78-207ENST00000466708 SLKQ9H2G2 1235 aaPredicted RBP25.07■■□□□ 1.6
CCDC78-207ENST00000466708 THRAP3Q9Y2W1 955 aaKnown RBP25.07■■□□□ 1.6
CCDC78-207ENST00000466708 NUP188Q5SRE5 1749 aa25.07■■□□□ 1.6
CCDC78-207ENST00000466708 TOM1O60784 492 aa25.06■■□□□ 1.6
CCDC78-207ENST00000466708 CHMLP26374 656 aa25.06■■□□□ 1.6
CCDC78-207ENST00000466708 RABEP1Q15276 862 aa25.06■■□□□ 1.6
CCDC78-207ENST00000466708 GPATCH3Q96I76 525 aa25.06■■□□□ 1.6
CCDC78-207ENST00000466708 ESYT1Q9BSJ8 1104 aa25.06■■□□□ 1.6
CCDC78-207ENST00000466708 A0A087WZG4 1122 aa25.05■■□□□ 1.6
CCDC78-207ENST00000466708 GLRX3O76003 335 aaKnown RBP25.05■■□□□ 1.6
CCDC78-207ENST00000466708 RABL6Q3YEC7 729 aaPredicted RBP25.05■■□□□ 1.6
CCDC78-207ENST00000466708 TTLL7Q6ZT98 887 aa25.05■■□□□ 1.6
CCDC78-207ENST00000466708 BCL9O00512 1426 aa25.04■■□□□ 1.6
CCDC78-207ENST00000466708 ATP5J2-PTCD1G3V325 749 aa25.04■■□□□ 1.6
CCDC78-207ENST00000466708 UBE3BQ7Z3V4 1068 aa25.04■■□□□ 1.6
CCDC78-207ENST00000466708 ATG3Q9NT62 314 aa25.04■■□□□ 1.6
CCDC78-207ENST00000466708 ASAP1Q9ULH1 1129 aa25.04■■□□□ 1.6
CCDC78-207ENST00000466708 CASP7P55210 303 aa25.03■■□□□ 1.6
CCDC78-207ENST00000466708 EPHA10Q5JZY3 1008 aa25.03■■□□□ 1.6
CCDC78-207ENST00000466708 NRAPQ86VF7 1730 aa25.03■■□□□ 1.6
CCDC78-207ENST00000466708 EPB41L2O43491 1005 aaKnown RBP25.02■■□□□ 1.6
CCDC78-207ENST00000466708 STARD3NLO95772 234 aa25.02■■□□□ 1.6
CCDC78-207ENST00000466708 IFIT2P09913 472 aaKnown RBP25.02■■□□□ 1.6
CCDC78-207ENST00000466708 CNTROBQ8N137 903 aa25.02■■□□□ 1.6
CCDC78-207ENST00000466708 COPRSQ9NQ92 184 aa25.02■■□□□ 1.6
CCDC78-207ENST00000466708 CWC25Q9NXE8 425 aaPredicted RBP25.02■■□□□ 1.6
CCDC78-207ENST00000466708 AK9Q5TCS8 1911 aa25.02■■□□□ 1.6
CCDC78-207ENST00000466708 H7C1W4 665 aa25.02■■□□□ 1.6
CCDC78-207ENST00000466708 UNC5CLQ8IV45 518 aa25.02■■□□□ 1.6
CCDC78-207ENST00000466708 CCDC191Q8NCU4 936 aa25.02■■□□□ 1.6
CCDC78-207ENST00000466708 ECHDC1Q9NTX5 307 aa25.02■■□□□ 1.6
CCDC78-207ENST00000466708 SASH1O94885 1247 aa25.01■■□□□ 1.59
CCDC78-207ENST00000466708 ADAMTS2O95450 1211 aa25.01■■□□□ 1.59
CCDC78-207ENST00000466708 SPATA31A1Q5TZJ5 1347 aa25.01■■□□□ 1.59
CCDC78-207ENST00000466708 K7ELQ4 463 aaPredicted RBP24.99■■□□□ 1.59
CCDC78-207ENST00000466708 AACSQ86V21 672 aa24.99■■□□□ 1.59
CCDC78-207ENST00000466708 CHMP5Q9NZZ3 219 aa24.99■■□□□ 1.59
CCDC78-207ENST00000466708 RFX5P48382 616 aaPredicted RBP24.98■■□□□ 1.59
CCDC78-207ENST00000466708 DNAJC10Q8IXB1 793 aa24.98■■□□□ 1.59
CCDC78-207ENST00000466708 NWD2Q9ULI1 1742 aa24.98■■□□□ 1.59
CCDC78-207ENST00000466708 MCCP23508 829 aa24.98■■□□□ 1.59
CCDC78-207ENST00000466708 RBM42Q9BTD8 480 aaKnown RBP24.98■■□□□ 1.59
CCDC78-207ENST00000466708 ZBTB3Q9H5J0 574 aa24.98■■□□□ 1.59
CCDC78-207ENST00000466708 PTPN12Q05209 780 aaKnown RBP24.96■■□□□ 1.59
CCDC78-207ENST00000466708 SIL1Q9H173 461 aa24.96■■□□□ 1.59
CCDC78-207ENST00000466708 TRIM28Q13263 835 aaKnown RBP24.96■■□□□ 1.59
CCDC78-207ENST00000466708 DDB1Q16531 1140 aa24.96■■□□□ 1.59
CCDC78-207ENST00000466708 SPRYD3Q8NCJ5 442 aa24.96■■□□□ 1.59
CCDC78-207ENST00000466708 JARID2Q92833 1246 aaPredicted RBP24.96■■□□□ 1.59
CCDC78-207ENST00000466708 EAF2Q96CJ1 260 aaPredicted RBP24.96■■□□□ 1.59
CCDC78-207ENST00000466708 TJP1Q07157 1748 aa24.95■■□□□ 1.58
CCDC78-207ENST00000466708 KIF6Q6ZMV9 814 aa24.95■■□□□ 1.58
CCDC78-207ENST00000466708 ISCA1Q9BUE6 129 aa24.95■■□□□ 1.58
CCDC78-207ENST00000466708 CD2BP2O95400 341 aaKnown RBP24.94■■□□□ 1.58
CCDC78-207ENST00000466708 ANAPC15P60006 121 aa24.94■■□□□ 1.58
CCDC78-207ENST00000466708 PIP4K2BP78356 416 aa24.94■■□□□ 1.58
CCDC78-207ENST00000466708 FOXO4P98177 505 aa24.94■■□□□ 1.58
CCDC78-207ENST00000466708 TCIRG1Q13488 830 aa24.94■■□□□ 1.58
CCDC78-207ENST00000466708 SLIT2O94813 1529 aa24.94■■□□□ 1.58
CCDC78-207ENST00000466708 SPATA31A5Q5VU36 1347 aa24.93■■□□□ 1.58
CCDC78-207ENST00000466708 SPATA31A7Q8IWB4 1347 aa24.93■■□□□ 1.58
CCDC78-207ENST00000466708 LMBR1LQ6UX01 489 aa24.93■■□□□ 1.58
CCDC78-207ENST00000466708 KLHDC4Q8TBB5 520 aa24.93■■□□□ 1.58
CCDC78-207ENST00000466708 ANO2Q9NQ90 1003 aa24.93■■□□□ 1.58
CCDC78-207ENST00000466708 ST18O60284 1047 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms