RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 SSH1Q8WYL5 1049 aa19.02■□□□□ 0.64
SNED1-208ENST00000466618 CHMP4AQ9BY43 222 aa19.02■□□□□ 0.64
SNED1-208ENST00000466618 CCNL1Q9UK58 526 aaPredicted RBP19.02■□□□□ 0.64
SNED1-208ENST00000466618 KCNQ4P56696 695 aa19.02■□□□□ 0.63
SNED1-208ENST00000466618 PDIA6Q15084 440 aa19.02■□□□□ 0.63
SNED1-208ENST00000466618 CCDC30Q5VVM6 783 aa19.02■□□□□ 0.63
SNED1-208ENST00000466618 TXNRD1Q16881 649 aa19.01■□□□□ 0.63
SNED1-208ENST00000466618 CAMKK2Q96RR4 588 aa19.01■□□□□ 0.63
SNED1-208ENST00000466618 STARD3NLO95772 234 aa19■□□□□ 0.63
SNED1-208ENST00000466618 LINC00116Q8NCU8 138 aa19■□□□□ 0.63
SNED1-208ENST00000466618 NECTIN2Q92692 538 aa19■□□□□ 0.63
SNED1-208ENST00000466618 BRPF1P55201 1214 aaPredicted RBP19■□□□□ 0.63
SNED1-208ENST00000466618 AAMPQ13685 434 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 LRP10Q7Z4F1 713 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 LAMB4A4D0S4 1761 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 NBPF26B4DH59 902 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 A1BGP04217 495 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 RLBP1P12271 317 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 NBPF14Q5TI25 921 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 NBPF10Q6P3W6 841 aaKnown RBP18.99■□□□□ 0.63
SNED1-208ENST00000466618 MRPL50Q8N5N7 158 aaKnown RBP18.99■□□□□ 0.63
SNED1-208ENST00000466618 NBPF15Q8N660 670 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 CHPF2Q9P2E5 772 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 DBF4Q9UBU7 674 aaPredicted RBP18.99■□□□□ 0.63
SNED1-208ENST00000466618 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 RGPD3A6NKT7 1758 aaPredicted RBP18.99■□□□□ 0.63
SNED1-208ENST00000466618 RGPD4Q7Z3J3 1758 aa18.99■□□□□ 0.63
SNED1-208ENST00000466618 INTS5Q6P9B9 1019 aaKnown RBP18.98■□□□□ 0.63
SNED1-208ENST00000466618 UPF1Q92900 1129 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNED1-208ENST00000466618 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNED1-208ENST00000466618 CRKLP46109 303 aaKnown RBP18.98■□□□□ 0.63
SNED1-208ENST00000466618 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
SNED1-208ENST00000466618 EN1Q05925 392 aaPredicted RBP18.98■□□□□ 0.63
SNED1-208ENST00000466618 SF3B2Q13435 895 aaKnown RBP18.98■□□□□ 0.63
SNED1-208ENST00000466618 PROSER3Q2NL68 480 aa18.98■□□□□ 0.63
SNED1-208ENST00000466618 BCL2L13Q9BXK5 485 aa18.98■□□□□ 0.63
SNED1-208ENST00000466618 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
SNED1-208ENST00000466618 OFD1O75665 1012 aa18.97■□□□□ 0.63
SNED1-208ENST00000466618 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
SNED1-208ENST00000466618 HSCBQ8IWL3 235 aa18.97■□□□□ 0.63
SNED1-208ENST00000466618 TNPO1Q92973 898 aaKnown RBP18.97■□□□□ 0.63
SNED1-208ENST00000466618 PPP1R9BQ96SB3 815 aa18.97■□□□□ 0.63
SNED1-208ENST00000466618 BAG6P46379 1132 aa18.96■□□□□ 0.63
SNED1-208ENST00000466618 RC3H1Q5TC82 1133 aaKnown RBP18.96■□□□□ 0.63
SNED1-208ENST00000466618 STK31Q9BXU1 1019 aa18.96■□□□□ 0.63
SNED1-208ENST00000466618 SMC4Q9NTJ3 1288 aa18.96■□□□□ 0.63
SNED1-208ENST00000466618 COL5A3P25940 1745 aaPredicted RBP18.96■□□□□ 0.63
SNED1-208ENST00000466618 EZH2Q15910 746 aaKnown RBP18.96■□□□□ 0.63
SNED1-208ENST00000466618 DEFB132Q7Z7B7 95 aa18.96■□□□□ 0.63
SNED1-208ENST00000466618 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
SNED1-208ENST00000466618 ZBTB1Q9Y2K1 713 aa18.96■□□□□ 0.63
SNED1-208ENST00000466618 CCDC173Q0VFZ6 552 aa18.95■□□□□ 0.62
SNED1-208ENST00000466618 RREB1Q92766 1687 aa18.95■□□□□ 0.62
SNED1-208ENST00000466618 ANXA1P04083 346 aa18.95■□□□□ 0.62
SNED1-208ENST00000466618 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
SNED1-208ENST00000466618 ZSCAN30Q86W11 494 aa18.95■□□□□ 0.62
SNED1-208ENST00000466618 RWDD1Q9H446 243 aaPredicted RBP18.94■□□□□ 0.62
SNED1-208ENST00000466618 HYPKQ9NX55 129 aa18.94■□□□□ 0.62
SNED1-208ENST00000466618 HMGB2P26583 209 aaKnown RBP18.93■□□□□ 0.62
SNED1-208ENST00000466618 TERF1P54274 439 aa18.93■□□□□ 0.62
SNED1-208ENST00000466618 G2E3Q7L622 706 aa18.93■□□□□ 0.62
SNED1-208ENST00000466618 MYL6BP14649 208 aa18.93■□□□□ 0.62
SNED1-208ENST00000466618 PHAXQ9H814 394 aaKnown RBP18.93■□□□□ 0.62
SNED1-208ENST00000466618 IL6STP40189 918 aaPredicted RBP18.92■□□□□ 0.62
SNED1-208ENST00000466618 EIF5P55010 431 aaKnown RBP18.92■□□□□ 0.62
SNED1-208ENST00000466618 RBM10P98175 930 aaKnown RBP18.92■□□□□ 0.62
SNED1-208ENST00000466618 SMC5Q8IY18 1101 aa18.92■□□□□ 0.62
SNED1-208ENST00000466618 KIF16BQ96L93 1317 aa18.91■□□□□ 0.62
SNED1-208ENST00000466618 C4BP0C0L5 1744 aa18.91■□□□□ 0.62
SNED1-208ENST00000466618 TAF1LQ8IZX4 1826 aa18.91■□□□□ 0.62
SNED1-208ENST00000466618 FLIIQ13045 1269 aa18.91■□□□□ 0.62
SNED1-208ENST00000466618 RAB3GAP1Q15042 981 aa18.91■□□□□ 0.62
SNED1-208ENST00000466618 NOB1Q9ULX3 412 aaKnown RBP18.91■□□□□ 0.62
SNED1-208ENST00000466618 RPS6KA4O75676 772 aa18.91■□□□□ 0.62
SNED1-208ENST00000466618 SKOR2Q2VWA4 1001 aaPredicted RBP18.91■□□□□ 0.62
SNED1-208ENST00000466618 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.91■□□□□ 0.62
SNED1-208ENST00000466618 AKT1S1Q96B36 256 aa18.91■□□□□ 0.62
SNED1-208ENST00000466618 CIZ1Q9ULV3 898 aaPredicted RBP18.91■□□□□ 0.62
SNED1-208ENST00000466618 AMIGO3Q86WK7 504 aa18.9■□□□□ 0.62
SNED1-208ENST00000466618 ARHGAP45Q92619 1136 aa18.9■□□□□ 0.62
SNED1-208ENST00000466618 SNX21Q969T3 373 aa18.9■□□□□ 0.62
SNED1-208ENST00000466618 GBP4Q96PP9 640 aa18.9■□□□□ 0.62
SNED1-208ENST00000466618 MYH14Q7Z406 1995 aaKnown RBP18.89■□□□□ 0.61
SNED1-208ENST00000466618 PTPRCP08575 1304 aa18.89■□□□□ 0.61
SNED1-208ENST00000466618 NASPP49321 788 aaPredicted RBP18.89■□□□□ 0.61
SNED1-208ENST00000466618 COPS6Q7L5N1 327 aa18.89■□□□□ 0.61
SNED1-208ENST00000466618 XAGE3Q8WTP9 111 aa18.89■□□□□ 0.61
SNED1-208ENST00000466618 ZNF827Q17R98 1081 aa18.88■□□□□ 0.61
SNED1-208ENST00000466618 GNPATO15228 680 aa18.88■□□□□ 0.61
SNED1-208ENST00000466618 MAP7D2Q96T17 732 aa18.88■□□□□ 0.61
SNED1-208ENST00000466618 RBM25P49756 843 aaKnown RBP18.87■□□□□ 0.61
SNED1-208ENST00000466618 AK7Q96M32 723 aa18.87■□□□□ 0.61
SNED1-208ENST00000466618 TTLL7Q6ZT98 887 aa18.86■□□□□ 0.61
SNED1-208ENST00000466618 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
SNED1-208ENST00000466618 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
SNED1-208ENST00000466618 TRIM27P14373 513 aa18.86■□□□□ 0.61
SNED1-208ENST00000466618 PTMSP20962 102 aa18.86■□□□□ 0.61
SNED1-208ENST00000466618 AIMP1Q12904 312 aaKnown RBP18.86■□□□□ 0.61
SNED1-208ENST00000466618 ZKSCAN2Q63HK3 967 aa18.86■□□□□ 0.61
SNED1-208ENST00000466618 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms