RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 NBPF26B4DH59 902 aa25.39■■□□□ 1.66
COL9A3-206ENST00000466532 PRELPP51888 382 aa25.39■■□□□ 1.66
COL9A3-206ENST00000466532 NBPF10Q6P3W6 841 aaKnown RBP25.39■■□□□ 1.66
COL9A3-206ENST00000466532 CLEC4GQ6UXB4 293 aa25.39■■□□□ 1.66
COL9A3-206ENST00000466532 NBPF15Q8N660 670 aa25.39■■□□□ 1.66
COL9A3-206ENST00000466532 PLEKHF1Q96S99 279 aa25.39■■□□□ 1.66
COL9A3-206ENST00000466532 ZNF652Q9Y2D9 606 aa25.39■■□□□ 1.66
COL9A3-206ENST00000466532 NFKBIEO00221 500 aa25.38■■□□□ 1.65
COL9A3-206ENST00000466532 RBM46Q8TBY0 533 aaKnown RBP25.38■■□□□ 1.65
COL9A3-206ENST00000466532 RRAGCQ9HB90 399 aa25.38■■□□□ 1.65
COL9A3-206ENST00000466532 APLP1P51693 650 aa25.37■■□□□ 1.65
COL9A3-206ENST00000466532 ZNF219Q9P2Y4 722 aaPredicted RBP25.37■■□□□ 1.65
COL9A3-206ENST00000466532 C21orf2O43822 256 aa25.36■■□□□ 1.65
COL9A3-206ENST00000466532 NFE2L2Q16236 605 aa25.36■■□□□ 1.65
COL9A3-206ENST00000466532 PNISRQ8TF01 805 aaKnown RBP25.36■■□□□ 1.65
COL9A3-206ENST00000466532 MAPK8IP3Q9UPT6 1336 aa25.36■■□□□ 1.65
COL9A3-206ENST00000466532 NBPF5PQ86XG9 351 aaPredicted RBP25.35■■□□□ 1.65
COL9A3-206ENST00000466532 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
COL9A3-206ENST00000466532 STYK1Q6J9G0 422 aa25.34■■□□□ 1.65
COL9A3-206ENST00000466532 SRGNP10124 158 aa25.33■■□□□ 1.65
COL9A3-206ENST00000466532 CNKSR1Q969H4 720 aa25.33■■□□□ 1.65
COL9A3-206ENST00000466532 THUMPD2Q9BTF0 503 aaKnown RBP25.33■■□□□ 1.65
COL9A3-206ENST00000466532 GLTPD2A6NH11 291 aa25.32■■□□□ 1.64
COL9A3-206ENST00000466532 RGL2O15211 777 aa25.32■■□□□ 1.64
COL9A3-206ENST00000466532 MASTLQ96GX5 879 aa25.32■■□□□ 1.64
COL9A3-206ENST00000466532 NIP7Q9Y221 180 aaKnown RBP eCLIP25.32■■□□□ 1.64
COL9A3-206ENST00000466532 EIF4A1P60842 406 aaKnown RBP25.3■■□□□ 1.64
COL9A3-206ENST00000466532 FSTL1Q12841 308 aa25.3■■□□□ 1.64
COL9A3-206ENST00000466532 RALBP1Q15311 655 aa25.3■■□□□ 1.64
COL9A3-206ENST00000466532 HLFQ16534 295 aa25.3■■□□□ 1.64
COL9A3-206ENST00000466532 PRPF40BQ6NWY9 871 aaKnown RBP25.3■■□□□ 1.64
COL9A3-206ENST00000466532 TPTE2Q6XPS3 522 aa25.29■■□□□ 1.64
COL9A3-206ENST00000466532 NGEFQ8N5V2 710 aa25.29■■□□□ 1.64
COL9A3-206ENST00000466532 FAM177BA6PVY3 158 aa25.28■■□□□ 1.64
COL9A3-206ENST00000466532 TAOK3Q9H2K8 898 aa25.28■■□□□ 1.64
COL9A3-206ENST00000466532 LTBP3Q9NS15 1303 aa25.27■■□□□ 1.64
COL9A3-206ENST00000466532 VEGFAP15692 232 aaPredicted RBP25.26■■□□□ 1.63
COL9A3-206ENST00000466532 ERFEQ4G0M1 354 aa25.26■■□□□ 1.63
COL9A3-206ENST00000466532 SOGA3Q5TF21 947 aa25.26■■□□□ 1.63
COL9A3-206ENST00000466532 RRP7AQ9Y3A4 280 aaKnown RBP25.26■■□□□ 1.63
COL9A3-206ENST00000466532 NPR1P16066 1061 aa25.25■■□□□ 1.63
COL9A3-206ENST00000466532 SMC1BQ8NDV3 1235 aa25.25■■□□□ 1.63
COL9A3-206ENST00000466532 MYL6BP14649 208 aa25.24■■□□□ 1.63
COL9A3-206ENST00000466532 DPY19L2Q6NUT2 758 aa25.24■■□□□ 1.63
COL9A3-206ENST00000466532 MAP3K15Q6ZN16 1313 aa25.23■■□□□ 1.63
COL9A3-206ENST00000466532 KLRG2A4D1S0 409 aaPredicted RBP25.23■■□□□ 1.63
COL9A3-206ENST00000466532 ERVV-1B6SEH8 477 aa25.23■■□□□ 1.63
COL9A3-206ENST00000466532 GTF2E1P29083 439 aaPredicted RBP25.23■■□□□ 1.63
COL9A3-206ENST00000466532 RIPK4P57078 832 aa25.23■■□□□ 1.63
COL9A3-206ENST00000466532 DDX10Q13206 875 aaKnown RBP25.23■■□□□ 1.63
COL9A3-206ENST00000466532 KIF6Q6ZMV9 814 aa25.23■■□□□ 1.63
COL9A3-206ENST00000466532 DNAJC5GQ8N7S2 189 aa25.23■■□□□ 1.63
COL9A3-206ENST00000466532 TTLL7Q6ZT98 887 aa25.22■■□□□ 1.63
COL9A3-206ENST00000466532 TSPYL4Q9UJ04 414 aa25.22■■□□□ 1.63
COL9A3-206ENST00000466532 HTRA3P83110 453 aa25.21■■□□□ 1.63
COL9A3-206ENST00000466532 C7orf43Q8WVR3 580 aa25.21■■□□□ 1.63
COL9A3-206ENST00000466532 ANKRD36CQ5JPF3 1778 aa25.21■■□□□ 1.63
COL9A3-206ENST00000466532 MYBBP1AQ9BQG0 1328 aaKnown RBP25.2■■□□□ 1.62
COL9A3-206ENST00000466532 CCDC93Q567U6 631 aa25.2■■□□□ 1.62
COL9A3-206ENST00000466532 NYXQ9GZU5 481 aa25.2■■□□□ 1.62
COL9A3-206ENST00000466532 POTECB2RU33 542 aa25.19■■□□□ 1.62
COL9A3-206ENST00000466532 ZBTB3Q9H5J0 574 aa25.19■■□□□ 1.62
COL9A3-206ENST00000466532 SCN4AP35499 1836 aa25.19■■□□□ 1.62
COL9A3-206ENST00000466532 ABCC12Q96J65 1359 aa25.18■■□□□ 1.62
COL9A3-206ENST00000466532 ERBB4Q15303 1308 aa25.18■■□□□ 1.62
COL9A3-206ENST00000466532 TMPOP42166 694 aaKnown RBP25.18■■□□□ 1.62
COL9A3-206ENST00000466532 NUTM1Q86Y26 1132 aa25.18■■□□□ 1.62
COL9A3-206ENST00000466532 GPTP24298 496 aa25.17■■□□□ 1.62
COL9A3-206ENST00000466532 ALDH1B1P30837 517 aa25.17■■□□□ 1.62
COL9A3-206ENST00000466532 LMOD3Q0VAK6 560 aa25.17■■□□□ 1.62
COL9A3-206ENST00000466532 UBN2Q6ZU65 1347 aa25.15■■□□□ 1.62
COL9A3-206ENST00000466532 EIF2S2P20042 333 aaKnown RBP25.15■■□□□ 1.62
COL9A3-206ENST00000466532 FKBP4Q02790 459 aaKnown RBP eCLIP25.15■■□□□ 1.62
COL9A3-206ENST00000466532 OLFM4Q6UX06 510 aa25.15■■□□□ 1.62
COL9A3-206ENST00000466532 CCDC146Q8IYE0 955 aa25.15■■□□□ 1.62
COL9A3-206ENST00000466532 BABAM1Q9NWV8 329 aa25.15■■□□□ 1.62
COL9A3-206ENST00000466532 IBTKQ9P2D0 1353 aaPredicted RBP25.15■■□□□ 1.62
COL9A3-206ENST00000466532 DDNO94850 711 aaPredicted RBP25.14■■□□□ 1.62
COL9A3-206ENST00000466532 KLRG1Q96E93 195 aa25.14■■□□□ 1.62
COL9A3-206ENST00000466532 RIC1Q4ADV7 1423 aa25.13■■□□□ 1.61
COL9A3-206ENST00000466532 NEUROD2Q15784 382 aa25.13■■□□□ 1.61
COL9A3-206ENST00000466532 CRY2Q49AN0 593 aa25.13■■□□□ 1.61
COL9A3-206ENST00000466532 SUSD4Q5VX71 490 aa25.13■■□□□ 1.61
COL9A3-206ENST00000466532 GIGYF2Q6Y7W6 1299 aaKnown RBP25.13■■□□□ 1.61
COL9A3-206ENST00000466532 RTKN2Q8IZC4 609 aa25.13■■□□□ 1.61
COL9A3-206ENST00000466532 LAMB2P55268 1798 aa25.13■■□□□ 1.61
COL9A3-206ENST00000466532 PDIA6Q15084 440 aa25.12■■□□□ 1.61
COL9A3-206ENST00000466532 ZNF34Q8IZ26 560 aa25.12■■□□□ 1.61
COL9A3-206ENST00000466532 ZNF277Q9NRM2 450 aaPredicted RBP25.12■■□□□ 1.61
COL9A3-206ENST00000466532 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.614e-6■□□□□ 8.9
COL9A3-206ENST00000466532 IFFO2Q5TF58 517 aa25.11■■□□□ 1.61
COL9A3-206ENST00000466532 LRP10Q7Z4F1 713 aa25.11■■□□□ 1.61
COL9A3-206ENST00000466532 RPGRQ92834 1020 aaKnown RBP25.1■■□□□ 1.61
COL9A3-206ENST00000466532 NTSR2O95665 410 aa25.09■■□□□ 1.61
COL9A3-206ENST00000466532 ANXA1P04083 346 aa25.09■■□□□ 1.61
COL9A3-206ENST00000466532 PROSER3Q2NL68 480 aa25.09■■□□□ 1.61
COL9A3-206ENST00000466532 RUNDC1Q96C34 613 aa25.09■■□□□ 1.61
COL9A3-206ENST00000466532 PARP10Q53GL7 1025 aa25.08■■□□□ 1.61
COL9A3-206ENST00000466532 PPP1R42Q7Z4L9 355 aa25.08■■□□□ 1.61
COL9A3-206ENST00000466532 SYNE4Q8N205 404 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms