RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 BEND3Q5T5X7 828 aa15.26■□□□□ 0.03
VPS16-206ENST00000466415 TTLL7Q6ZT98 887 aa15.26■□□□□ 0.03
VPS16-206ENST00000466415 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
VPS16-206ENST00000466415 MYD88Q99836 296 aa15.26■□□□□ 0.03
VPS16-206ENST00000466415 METTL22Q9BUU2 404 aaPredicted RBP15.26■□□□□ 0.03
VPS16-206ENST00000466415 HMGB2P26583 209 aaKnown RBP15.25■□□□□ 0.03
VPS16-206ENST00000466415 LINS1Q8NG48 757 aa15.25■□□□□ 0.03
VPS16-206ENST00000466415 MEIS3Q99687 375 aa15.25■□□□□ 0.03
VPS16-206ENST00000466415 ZBTB3Q9H5J0 574 aa15.25■□□□□ 0.03
VPS16-206ENST00000466415 NUP188Q5SRE5 1749 aa15.24■□□□□ 0.03
VPS16-206ENST00000466415 INTS5Q6P9B9 1019 aaKnown RBP15.24■□□□□ 0.03
VPS16-206ENST00000466415 C1orf115Q9H7X2 142 aa15.24■□□□□ 0.03
VPS16-206ENST00000466415 MAP3K15Q6ZN16 1313 aa15.23■□□□□ 0.03
VPS16-206ENST00000466415 A0A087WZG4 1122 aa15.23■□□□□ 0.03
VPS16-206ENST00000466415 UBTFL1P0CB47 393 aaPredicted RBP15.23■□□□□ 0.03
VPS16-206ENST00000466415 KCNQ4P56696 695 aa15.23■□□□□ 0.03
VPS16-206ENST00000466415 SLC27A3Q5K4L6 730 aa15.23■□□□□ 0.03
VPS16-206ENST00000466415 CENPQQ7L2Z9 268 aaPredicted RBP15.23■□□□□ 0.03
VPS16-206ENST00000466415 DZIP3Q86Y13 1208 aaKnown RBP15.23■□□□□ 0.03
VPS16-206ENST00000466415 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
VPS16-206ENST00000466415 C9orf78Q9NZ63 289 aaPredicted RBP15.23■□□□□ 0.03
VPS16-206ENST00000466415 COL15A1P39059 1388 aa15.23■□□□□ 0.03
VPS16-206ENST00000466415 APBA3O96018 575 aa15.22■□□□□ 0.03
VPS16-206ENST00000466415 GNAI2P04899 355 aa15.22■□□□□ 0.03
VPS16-206ENST00000466415 CWF19L2Q2TBE0 894 aaKnown RBP15.22■□□□□ 0.03
VPS16-206ENST00000466415 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
VPS16-206ENST00000466415 RC3H1Q5TC82 1133 aaKnown RBP15.22■□□□□ 0.03
VPS16-206ENST00000466415 AK7Q96M32 723 aa15.22■□□□□ 0.03
VPS16-206ENST00000466415 HDAC5Q9UQL6 1122 aa15.22■□□□□ 0.03
VPS16-206ENST00000466415 PCDHB15Q9Y5E8 787 aa15.22■□□□□ 0.03
VPS16-206ENST00000466415 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
VPS16-206ENST00000466415 NEURL1BA8MQ27 555 aa15.21■□□□□ 0.03
VPS16-206ENST00000466415 GNPATO15228 680 aa15.21■□□□□ 0.03
VPS16-206ENST00000466415 EIF5P55010 431 aaKnown RBP15.21■□□□□ 0.03
VPS16-206ENST00000466415 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
VPS16-206ENST00000466415 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
VPS16-206ENST00000466415 ATP5J2-PTCD1G3V325 749 aa15.2■□□□□ 0.02
VPS16-206ENST00000466415 IGKV5-2P06315 115 aa15.2■□□□□ 0.02
VPS16-206ENST00000466415 TBC1D2BQ9UPU7 963 aa15.2■□□□□ 0.02
VPS16-206ENST00000466415 RTCBQ9Y3I0 505 aaKnown RBP15.2■□□□□ 0.02
VPS16-206ENST00000466415 IBTKQ9P2D0 1353 aaPredicted RBP15.2■□□□□ 0.02
VPS16-206ENST00000466415 ERVV-1B6SEH8 477 aa15.19■□□□□ 0.02
VPS16-206ENST00000466415 GRM8O00222 908 aa15.19■□□□□ 0.02
VPS16-206ENST00000466415 SF3B2Q13435 895 aaKnown RBP15.19■□□□□ 0.02
VPS16-206ENST00000466415 GCKRQ14397 625 aa15.19■□□□□ 0.02
VPS16-206ENST00000466415 TXNRD1Q16881 649 aa15.19■□□□□ 0.02
VPS16-206ENST00000466415 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
VPS16-206ENST00000466415 USP44Q9H0E7 712 aa15.19■□□□□ 0.02
VPS16-206ENST00000466415 CWC25Q9NXE8 425 aaPredicted RBP15.19■□□□□ 0.02
VPS16-206ENST00000466415 ZNF652Q9Y2D9 606 aa15.19■□□□□ 0.02
VPS16-206ENST00000466415 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
VPS16-206ENST00000466415 TAF1LQ8IZX4 1826 aa15.19■□□□□ 0.02
VPS16-206ENST00000466415 KDM2BQ8NHM5 1336 aa15.18■□□□□ 0.02
VPS16-206ENST00000466415 PLSCR1O15162 318 aa15.18■□□□□ 0.02
VPS16-206ENST00000466415 HMMRO75330 724 aa15.18■□□□□ 0.02
VPS16-206ENST00000466415 RPS6KA4O75676 772 aa15.18■□□□□ 0.02
VPS16-206ENST00000466415 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
VPS16-206ENST00000466415 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
VPS16-206ENST00000466415 GIGYF2Q6Y7W6 1299 aaKnown RBP15.18■□□□□ 0.02
VPS16-206ENST00000466415 RPAP2Q8IXW5 612 aaPredicted RBP15.18■□□□□ 0.02
VPS16-206ENST00000466415 RGPD3A6NKT7 1758 aaPredicted RBP15.17■□□□□ 0.02
VPS16-206ENST00000466415 RGPD4Q7Z3J3 1758 aa15.17■□□□□ 0.02
VPS16-206ENST00000466415 CEP85Q6P2H3 762 aa15.17■□□□□ 0.02
VPS16-206ENST00000466415 ANKRD44Q8N8A2 993 aa15.17■□□□□ 0.02
VPS16-206ENST00000466415 CCDC191Q8NCU4 936 aa15.17■□□□□ 0.02
VPS16-206ENST00000466415 LRRC4BQ9NT99 713 aa15.17■□□□□ 0.02
VPS16-206ENST00000466415 MYH14Q7Z406 1995 aaKnown RBP15.16■□□□□ 0.02
VPS16-206ENST00000466415 ANKRD36CQ5JPF3 1778 aa15.16■□□□□ 0.02
VPS16-206ENST00000466415 CAMTA2O94983 1202 aa15.16■□□□□ 0.02
VPS16-206ENST00000466415 IGHDP01880 384 aa15.16■□□□□ 0.02
VPS16-206ENST00000466415 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
VPS16-206ENST00000466415 HLFQ16534 295 aa15.16■□□□□ 0.02
VPS16-206ENST00000466415 ISCA1Q9BUE6 129 aa15.16■□□□□ 0.02
VPS16-206ENST00000466415 BCORQ6W2J9 1755 aa15.16■□□□□ 0.02
VPS16-206ENST00000466415 SCN7AQ01118 1682 aa15.16■□□□□ 0.02
VPS16-206ENST00000466415 PHF14O94880 888 aa15.15■□□□□ 0.02
VPS16-206ENST00000466415 GPTP24298 496 aa15.15■□□□□ 0.02
VPS16-206ENST00000466415 UTYO14607 1347 aa15.15■□□□□ 0.02
VPS16-206ENST00000466415 ZPR1O75312 459 aa15.14■□□□□ 0.01
VPS16-206ENST00000466415 ADRA2BP18089 450 aa15.14■□□□□ 0.01
VPS16-206ENST00000466415 UBE3BQ7Z3V4 1068 aa15.14■□□□□ 0.01
VPS16-206ENST00000466415 RFC4P35249 363 aa15.13■□□□□ 0.01
VPS16-206ENST00000466415 BAG6P46379 1132 aa15.13■□□□□ 0.01
VPS16-206ENST00000466415 TRIM28Q13263 835 aaKnown RBP15.13■□□□□ 0.01
VPS16-206ENST00000466415 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
VPS16-206ENST00000466415 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
VPS16-206ENST00000466415 NARFQ9UHQ1 456 aa15.13■□□□□ 0.01
VPS16-206ENST00000466415 RGL2O15211 777 aa15.12■□□□□ 0.01
VPS16-206ENST00000466415 SSFA2P28290 1259 aa15.12■□□□□ 0.01
VPS16-206ENST00000466415 PARP10Q53GL7 1025 aa15.12■□□□□ 0.01
VPS16-206ENST00000466415 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
VPS16-206ENST00000466415 GCC1Q96CN9 775 aa15.12■□□□□ 0.01
VPS16-206ENST00000466415 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
VPS16-206ENST00000466415 NUP98P52948 1817 aa15.12■□□□□ 0.01
VPS16-206ENST00000466415 ATP8B2P98198 1209 aa15.11■□□□□ 0.01
VPS16-206ENST00000466415 USPL1Q5W0Q7 1092 aa15.11■□□□□ 0.01
VPS16-206ENST00000466415 CLEC4GQ6UXB4 293 aa15.11■□□□□ 0.01
VPS16-206ENST00000466415 SIRT2Q8IXJ6 389 aa15.11■□□□□ 0.01
VPS16-206ENST00000466415 ZNF34Q8IZ26 560 aa15.11■□□□□ 0.01
VPS16-206ENST00000466415 PROM2Q8N271 834 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms