RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 TEAD4Q15561 434 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 ELOA3BQ3SY89 546 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 PRRT3Q5FWE3 981 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 ARTNQ5T4W7 220 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 ZNF295-AS1Q8N0V1 137 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 ELOA3Q8NG57 546 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 L3MBTL2Q969R5 705 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 PLVAPQ9BX97 442 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 ZFP64Q9NPA5 681 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 PARP3Q9Y6F1 533 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 PIK3CDO00329 1044 aa5.35□□□□□ -1.55
CCDC93-205ENST00000466171 NOS2P35228 1153 aa5.35□□□□□ -1.55
CCDC93-205ENST00000466171 GATA4P43694 442 aa5.35□□□□□ -1.55
CCDC93-205ENST00000466171 ATP1A2P50993 1020 aa5.35□□□□□ -1.55
CCDC93-205ENST00000466171 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCDC93-205ENST00000466171 ZNF358Q9NW07 568 aa5.35□□□□□ -1.55
CCDC93-205ENST00000466171 KLF15Q9UIH9 416 aa5.35□□□□□ -1.55
CCDC93-205ENST00000466171 COG6Q9Y2V7 657 aa5.35□□□□□ -1.55
CCDC93-205ENST00000466171 USP3Q9Y6I4 520 aa5.35□□□□□ -1.55
CCDC93-205ENST00000466171 SERTM1A2A2V5 107 aa5.34□□□□□ -1.55
CCDC93-205ENST00000466171 EFSO43281 561 aa5.34□□□□□ -1.55
CCDC93-205ENST00000466171 APBA3O96018 575 aa5.34□□□□□ -1.55
CCDC93-205ENST00000466171 TXLNAP40222 546 aa5.34□□□□□ -1.55
CCDC93-205ENST00000466171 LRRC69Q6ZNQ3 347 aa5.34□□□□□ -1.55
CCDC93-205ENST00000466171 SYT9Q86SS6 491 aa5.34□□□□□ -1.55
CCDC93-205ENST00000466171 SLC9A9Q8IVB4 645 aa5.34□□□□□ -1.55
CCDC93-205ENST00000466171 ALG2Q9H553 416 aa5.34□□□□□ -1.55
CCDC93-205ENST00000466171 RBM19Q9Y4C8 960 aaKnown RBP5.34□□□□□ -1.55
CCDC93-205ENST00000466171 USP17L5A8MUK1 530 aa5.33□□□□□ -1.56
CCDC93-205ENST00000466171 EML1O00423 815 aa5.33□□□□□ -1.56
CCDC93-205ENST00000466171 SIN3BO75182 1162 aa5.33□□□□□ -1.56
CCDC93-205ENST00000466171 RSPO4Q2I0M5 234 aaPredicted RBP5.33□□□□□ -1.56
CCDC93-205ENST00000466171 RHPN1Q8TCX5 695 aa5.33□□□□□ -1.56
CCDC93-205ENST00000466171 STRN4Q9NRL3 753 aa5.33□□□□□ -1.56
CCDC93-205ENST00000466171 ANKIB1Q9P2G1 1089 aa5.33□□□□□ -1.56
CCDC93-205ENST00000466171 PSMA6P60900 246 aaKnown RBP5.32□□□□□ -1.56
CCDC93-205ENST00000466171 TNS4Q8IZW8 715 aa5.32□□□□□ -1.56
CCDC93-205ENST00000466171 ZDHHC1Q8WTX9 485 aa5.32□□□□□ -1.56
CCDC93-205ENST00000466171 TRIM11Q96F44 468 aa5.32□□□□□ -1.56
CCDC93-205ENST00000466171 NACC1Q96RE7 527 aa5.32□□□□□ -1.56
CCDC93-205ENST00000466171 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
CCDC93-205ENST00000466171 ADARB2-AS1A8MUL3 147 aa5.31□□□□□ -1.56
CCDC93-205ENST00000466171 C1orf53Q5VUE5 145 aa5.31□□□□□ -1.56
CCDC93-205ENST00000466171 CCDC102BQ68D86 513 aa5.31□□□□□ -1.56
CCDC93-205ENST00000466171 NBPF11Q86T75 865 aa5.31□□□□□ -1.56
CCDC93-205ENST00000466171 DEPDC4Q8N2C3 294 aa5.31□□□□□ -1.56
CCDC93-205ENST00000466171 TPCN2Q8NHX9 752 aa5.31□□□□□ -1.56
CCDC93-205ENST00000466171 CEP63Q96MT8 703 aa5.31□□□□□ -1.56
CCDC93-205ENST00000466171 HCN2Q9UL51 889 aa5.31□□□□□ -1.56
CCDC93-205ENST00000466171 M0R082 166 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 EPHA4P54764 986 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 SPEM2Q0P670 501 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 SFSWAPQ12872 951 aaKnown RBP5.3□□□□□ -1.56
CCDC93-205ENST00000466171 FLIIQ13045 1269 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 TRIM28Q13263 835 aaKnown RBP5.3□□□□□ -1.56
CCDC93-205ENST00000466171 HIF1AQ16665 826 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 NKAPLQ5M9Q1 402 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 TBCELQ5QJ74 424 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 PLEKHM2Q8IWE5 1019 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 ZNF417Q8TAU3 575 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 TNFRSF25Q93038 417 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 ZNF587Q96SQ5 575 aaPredicted RBP5.3□□□□□ -1.56
CCDC93-205ENST00000466171 BRD7Q9NPI1 651 aa5.3□□□□□ -1.56
CCDC93-205ENST00000466171 M0R2N6 131 aa5.29□□□□□ -1.56
CCDC93-205ENST00000466171 UBTFP17480 764 aaKnown RBP5.29□□□□□ -1.56
CCDC93-205ENST00000466171 LARGE2Q8N3Y3 721 aa5.29□□□□□ -1.56
CCDC93-205ENST00000466171 PRDM6Q9NQX0 595 aa5.29□□□□□ -1.56
CCDC93-205ENST00000466171 KCNH4Q9UQ05 1017 aa5.29□□□□□ -1.56
CCDC93-205ENST00000466171 USP17L3A6NCW0 530 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 USP17L4A6NCW7 530 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 PALM3A6NDB9 673 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-205ENST00000466171 ADH7P40394 386 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 HIRAP54198 1017 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-205ENST00000466171 USP17L2Q6R6M4 530 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 USP17L1Q7RTZ2 530 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 OGFOD1Q8N543 542 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 SLC30A3Q99726 388 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 PHACTR1Q9C0D0 580 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 TSPAN10Q9H1Z9 355 aaPredicted RBP5.28□□□□□ -1.56
CCDC93-205ENST00000466171 HCN4Q9Y3Q4 1203 aa5.28□□□□□ -1.56
CCDC93-205ENST00000466171 SFI1A8K8P3 1242 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 DYRK3O43781 588 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 ATP9BO43861 1147 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 PPP1R12BO60237 982 aaPredicted RBP5.27□□□□□ -1.57
CCDC93-205ENST00000466171 LILRB5O75023 590 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 KCNQ4P56696 695 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 MICALL1Q8N3F8 863 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 POM121Q96HA1 1249 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 MDFIQ99750 246 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 EFCC1Q9HA90 598 aa5.27□□□□□ -1.57
CCDC93-205ENST00000466171 MKRN1Q9UHC7 482 aaKnown RBP5.27□□□□□ -1.57
CCDC93-205ENST00000466171 C9orf172C9J069 976 aa5.26□□□□□ -1.57
CCDC93-205ENST00000466171 ZBTB7BO15156 539 aaPredicted RBP5.26□□□□□ -1.57
CCDC93-205ENST00000466171 ALBP02768 609 aa5.26□□□□□ -1.57
CCDC93-205ENST00000466171 TBC1D8BQ0IIM8 1120 aa5.26□□□□□ -1.57
CCDC93-205ENST00000466171 TRAPPC3LQ5T215 181 aa5.26□□□□□ -1.57
CCDC93-205ENST00000466171 SH3PXD2AQ5TCZ1 1133 aa5.26□□□□□ -1.57
CCDC93-205ENST00000466171 HDGFL1Q5TGJ6 251 aa5.26□□□□□ -1.57
CCDC93-205ENST00000466171 GAS2L2Q8NHY3 880 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms