RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ST8SIA5O15466 376 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 ZNF853P0CG23 659 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 TEFQ10587 303 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 NKX1-1Q15270 411 aaPredicted RBP7.76□□□□□ -1.17
CHMP3-206ENST00000466032 TAF7Q15545 349 aaPredicted RBP7.76□□□□□ -1.17
CHMP3-206ENST00000466032 DUSP27Q5VZP5 1158 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 ZNF772Q68DY9 489 aaPredicted RBP7.76□□□□□ -1.17
CHMP3-206ENST00000466032 ZNF454Q8N9F8 522 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 USP21Q9UK80 565 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 TRPC5Q9UL62 973 aaPredicted RBP7.76□□□□□ -1.17
CHMP3-206ENST00000466032 RRP7AQ9Y3A4 280 aaKnown RBP7.76□□□□□ -1.17
CHMP3-206ENST00000466032 PLCH1Q4KWH8 1693 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 CHL1O00533 1208 aa7.75□□□□□ -1.17
CHMP3-206ENST00000466032 TBC1D12O60347 775 aa7.75□□□□□ -1.17
CHMP3-206ENST00000466032 HOXB7P09629 217 aa7.75□□□□□ -1.17
CHMP3-206ENST00000466032 MS4A1P11836 297 aa7.75□□□□□ -1.17
CHMP3-206ENST00000466032 PHKG2P15735 406 aa7.75□□□□□ -1.17
CHMP3-206ENST00000466032 ERICH6BQ5W0A0 696 aa7.75□□□□□ -1.17
CHMP3-206ENST00000466032 USHBP1Q8N6Y0 703 aa7.75□□□□□ -1.17
CHMP3-206ENST00000466032 C8orf37Q96NL8 207 aa7.75□□□□□ -1.17
CHMP3-206ENST00000466032 TSR3Q9UJK0 312 aaKnown RBP7.75□□□□□ -1.17
CHMP3-206ENST00000466032 RNMTO43148 476 aaKnown RBP7.74□□□□□ -1.17
CHMP3-206ENST00000466032 NEFLP07196 543 aa7.74□□□□□ -1.17
CHMP3-206ENST00000466032 DDB1Q16531 1140 aa7.74□□□□□ -1.17
CHMP3-206ENST00000466032 ALDH1L2Q3SY69 923 aa7.74□□□□□ -1.17
CHMP3-206ENST00000466032 DISP2A7MBM2 1401 aa7.74□□□□□ -1.17
CHMP3-206ENST00000466032 PKD1L3Q7Z443 1732 aa7.74□□□□□ -1.17
CHMP3-206ENST00000466032 BCL9LQ86UU0 1499 aa7.74□□□□□ -1.17
CHMP3-206ENST00000466032 NRAPQ86VF7 1730 aa7.73□□□□□ -1.17
CHMP3-206ENST00000466032 BRPF1P55201 1214 aaPredicted RBP7.73□□□□□ -1.17
CHMP3-206ENST00000466032 KCTD17Q8N5Z5 321 aa7.73□□□□□ -1.17
CHMP3-206ENST00000466032 ZSCAN1Q8NBB4 408 aa7.73□□□□□ -1.17
CHMP3-206ENST00000466032 ANO8Q9HCE9 1232 aaPredicted RBP7.73□□□□□ -1.17
CHMP3-206ENST00000466032 RCAN3Q9UKA8 241 aa7.73□□□□□ -1.17
CHMP3-206ENST00000466032 CCDC9Q9Y3X0 531 aaKnown RBP7.73□□□□□ -1.17
CHMP3-206ENST00000466032 FANCIQ9NVI1 1328 aa7.73□□□□□ -1.17
CHMP3-206ENST00000466032 MEGF6O75095 1541 aa7.73□□□□□ -1.17
CHMP3-206ENST00000466032 DLG5Q8TDM6 1919 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 RGPD2P0DJD1 1756 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 TNS2Q63HR2 1409 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 TERTO14746 1132 aaKnown RBP7.72□□□□□ -1.17
CHMP3-206ENST00000466032 ONECUT3O60422 494 aaPredicted RBP7.72□□□□□ -1.17
CHMP3-206ENST00000466032 FOSBP53539 338 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 MCM10Q7L590 875 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 CRIPAKQ8N1N5 446 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 IL17REQ8NFR9 667 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 GJD4Q96KN9 370 aaPredicted RBP7.72□□□□□ -1.17
CHMP3-206ENST00000466032 SLC52A2Q9HAB3 445 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 TSPYL4Q9UJ04 414 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 AFF2P51816 1311 aa7.72□□□□□ -1.17
CHMP3-206ENST00000466032 LRP6O75581 1613 aa7.71□□□□□ -1.17
CHMP3-206ENST00000466032 ATRNO75882 1429 aa7.71□□□□□ -1.17
CHMP3-206ENST00000466032 ADAMTS7Q9UKP4 1686 aa7.71□□□□□ -1.18
CHMP3-206ENST00000466032 BTBD11A6QL63 1104 aa7.71□□□□□ -1.18
CHMP3-206ENST00000466032 IPO8O15397 1037 aaKnown RBP7.71□□□□□ -1.18
CHMP3-206ENST00000466032 CYP27B1O15528 508 aa7.71□□□□□ -1.18
CHMP3-206ENST00000466032 CABP4P57796 275 aa7.71□□□□□ -1.18
CHMP3-206ENST00000466032 AAMPQ13685 434 aa7.71□□□□□ -1.18
CHMP3-206ENST00000466032 CHMP4BQ9H444 224 aaKnown RBP7.71□□□□□ -1.18
CHMP3-206ENST00000466032 MBIPQ9NS73 344 aa7.71□□□□□ -1.18
CHMP3-206ENST00000466032 USP35Q9P2H5 1018 aa7.71□□□□□ -1.18
CHMP3-206ENST00000466032 LAS1LQ9Y4W2 734 aaKnown RBP7.71□□□□□ -1.18
CHMP3-206ENST00000466032 KIF16BQ96L93 1317 aa7.71□□□□□ -1.18
CHMP3-206ENST00000466032 LRRC37A3O60309 1634 aa7.7□□□□□ -1.18
CHMP3-206ENST00000466032 BCL9O00512 1426 aa7.7□□□□□ -1.18
CHMP3-206ENST00000466032 MRC1P22897 1456 aa7.7□□□□□ -1.18
CHMP3-206ENST00000466032 MPRIPQ6WCQ1 1025 aa7.7□□□□□ -1.18
CHMP3-206ENST00000466032 TTC5Q8N0Z6 440 aa7.7□□□□□ -1.18
CHMP3-206ENST00000466032 DDX54Q8TDD1 881 aaKnown RBP7.7□□□□□ -1.18
CHMP3-206ENST00000466032 TEX13AQ9BXU3 409 aaPredicted RBP7.7□□□□□ -1.18
CHMP3-206ENST00000466032 QTRT2Q9H974 415 aaKnown RBP7.7□□□□□ -1.18
CHMP3-206ENST00000466032 RNF123Q5XPI4 1314 aa7.7□□□□□ -1.18
CHMP3-206ENST00000466032 FAM187AA6NFU0 413 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 GSK3AP49840 483 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 RBM6P78332 1123 aaKnown RBP7.69□□□□□ -1.18
CHMP3-206ENST00000466032 EXOSC9Q06265 439 aaKnown RBP7.69□□□□□ -1.18
CHMP3-206ENST00000466032 DCTN1Q14203 1278 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 TWISTNBQ3B726 338 aaPredicted RBP7.69□□□□□ -1.18
CHMP3-206ENST00000466032 CCDC30Q5VVM6 783 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 ZNF790Q6PG37 636 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 KLHL34Q8N239 644 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 ARHGAP45Q92619 1136 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 LGR6Q9HBX8 967 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 TMOD3Q9NYL9 352 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 SCN11AQ9UI33 1791 aa7.69□□□□□ -1.18
CHMP3-206ENST00000466032 WNK3Q9BYP7 1800 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 VAMP4O75379 141 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 RARSP54136 660 aaKnown RBP7.68□□□□□ -1.18
CHMP3-206ENST00000466032 PDE3AQ14432 1141 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 VSIG10Q8N0Z9 540 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 NFATC2IPQ8NCF5 419 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 SMARCC1Q92922 1105 aaPredicted RBP7.68□□□□□ -1.18
CHMP3-206ENST00000466032 FMNL2Q96PY5 1086 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 STK31Q9BXU1 1019 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 IL21Q9HBE4 155 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 GMPR2Q9P2T1 348 aaKnown RBP7.68□□□□□ -1.18
CHMP3-206ENST00000466032 ERBB4Q15303 1308 aa7.68□□□□□ -1.18
CHMP3-206ENST00000466032 SNRPA1P09661 255 aaKnown RBP7.67□□□□□ -1.18
CHMP3-206ENST00000466032 RRP1P56182 461 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms