RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 SF3B2Q13435 895 aaKnown RBP8.99□□□□□ -0.97
TPM3-214ENST00000466010 RETREG3Q86VR2 466 aa8.99□□□□□ -0.97
TPM3-214ENST00000466010 SEPT12Q8IYM1 358 aa8.99□□□□□ -0.97
TPM3-214ENST00000466010 PUS7Q96PZ0 661 aaKnown RBP8.99□□□□□ -0.97
TPM3-214ENST00000466010 KCNK17Q96T54 332 aa8.99□□□□□ -0.97
TPM3-214ENST00000466010 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
TPM3-214ENST00000466010 CLSPNQ9HAW4 1339 aa8.99□□□□□ -0.97
TPM3-214ENST00000466010 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
TPM3-214ENST00000466010 TMEM164Q5U3C3 297 aa8.98□□□□□ -0.97
TPM3-214ENST00000466010 DESI1Q6ICB0 168 aa8.98□□□□□ -0.97
TPM3-214ENST00000466010 KRT27Q7Z3Y8 459 aa8.98□□□□□ -0.97
TPM3-214ENST00000466010 ZNF592Q92610 1267 aa8.98□□□□□ -0.97
TPM3-214ENST00000466010 NOVA2Q9UNW9 492 aaKnown RBP8.98□□□□□ -0.97
TPM3-214ENST00000466010 SPATA31A5Q5VU36 1347 aa8.98□□□□□ -0.97
TPM3-214ENST00000466010 SPATA31A7Q8IWB4 1347 aa8.98□□□□□ -0.97
TPM3-214ENST00000466010 TTC21AQ8NDW8 1320 aa8.98□□□□□ -0.97
TPM3-214ENST00000466010 CRYBG1Q9Y4K1 1723 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 A0A0G2JS52 829 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 C11orf95C9JLR9 678 aaPredicted RBP8.97□□□□□ -0.97
TPM3-214ENST00000466010 GCP02774 474 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 CFHP08603 1231 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 EVA1CP58658 441 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 MYT1Q01538 1121 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 KMT5BQ4FZB7 885 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 KCNH5Q8NCM2 988 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 PHRF1Q9P1Y6 1649 aaKnown RBP8.97□□□□□ -0.97
TPM3-214ENST00000466010 NINLQ9Y2I6 1382 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 NRAPQ86VF7 1730 aa8.97□□□□□ -0.97
TPM3-214ENST00000466010 RBM47A0AV96 593 aaKnown RBP8.96□□□□□ -0.98
TPM3-214ENST00000466010 USP17L3A6NCW0 530 aa8.96□□□□□ -0.98
TPM3-214ENST00000466010 USP17L4A6NCW7 530 aa8.96□□□□□ -0.98
TPM3-214ENST00000466010 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
TPM3-214ENST00000466010 ARID4AP29374 1257 aaPredicted RBP8.96□□□□□ -0.98
TPM3-214ENST00000466010 ZC3H6P61129 1189 aaKnown RBP8.96□□□□□ -0.98
TPM3-214ENST00000466010 Q3C1V9 767 aa8.96□□□□□ -0.98
TPM3-214ENST00000466010 USP17L2Q6R6M4 530 aa8.96□□□□□ -0.98
TPM3-214ENST00000466010 USP17L1Q7RTZ2 530 aa8.96□□□□□ -0.98
TPM3-214ENST00000466010 THRAP3Q9Y2W1 955 aaKnown RBP8.96□□□□□ -0.98
TPM3-214ENST00000466010 SPATA31A1Q5TZJ5 1347 aa8.96□□□□□ -0.98
TPM3-214ENST00000466010 SSH2Q76I76 1423 aa8.96□□□□□ -0.98
TPM3-214ENST00000466010 NRKQ7Z2Y5 1582 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 FAM196BA6NMK8 535 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 PER1O15534 1290 aaPredicted RBP8.95□□□□□ -0.98
TPM3-214ENST00000466010 SKIP12755 728 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 FAM98CQ17RN3 349 aaKnown RBP8.95□□□□□ -0.98
TPM3-214ENST00000466010 NUTM2GQ5VZR2 741 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 PLEKHM2Q8IWE5 1019 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 STK32AQ8WU08 396 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 TERF2IPQ9NYB0 399 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 RABGEF1Q9UJ41 708 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 ZMIZ1Q9ULJ6 1067 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 AATKQ6ZMQ8 1374 aa8.95□□□□□ -0.98
TPM3-214ENST00000466010 CPSF1Q10570 1443 aaKnown RBP8.95□□□□□ -0.98
TPM3-214ENST00000466010 USP17L5A8MUK1 530 aa8.94□□□□□ -0.98
TPM3-214ENST00000466010 FBXO45P0C2W1 286 aa8.94□□□□□ -0.98
TPM3-214ENST00000466010 LARP1Q6PKG0 1096 aaKnown RBP8.94□□□□□ -0.98
TPM3-214ENST00000466010 HDGFL2Q7Z4V5 671 aaPredicted RBP8.94□□□□□ -0.98
TPM3-214ENST00000466010 TCP11L2Q8N4U5 519 aa8.94□□□□□ -0.98
TPM3-214ENST00000466010 SYMPKQ92797 1274 aaKnown RBP8.94□□□□□ -0.98
TPM3-214ENST00000466010 ZBED2Q9BTP6 218 aa8.94□□□□□ -0.98
TPM3-214ENST00000466010 ZC3H4Q9UPT8 1303 aaKnown RBP8.94□□□□□ -0.98
TPM3-214ENST00000466010 KTN1Q86UP2 1357 aaKnown RBP8.94□□□□□ -0.98
TPM3-214ENST00000466010 SLIT3O75094 1523 aa8.94□□□□□ -0.98
TPM3-214ENST00000466010 SRCAPQ6ZRS2 3230 aa8.93□□□□□ -0.98
TPM3-214ENST00000466010 CHRNA2Q15822 529 aa8.93□□□□□ -0.98
TPM3-214ENST00000466010 CDCA7Q9BWT1 371 aaPredicted RBP8.93□□□□□ -0.98
TPM3-214ENST00000466010 STRN4Q9NRL3 753 aa8.93□□□□□ -0.98
TPM3-214ENST00000466010 TTC21BQ7Z4L5 1316 aa8.93□□□□□ -0.98
TPM3-214ENST00000466010 ABCC6O95255 1503 aa8.93□□□□□ -0.98
TPM3-214ENST00000466010 THSD7AQ9UPZ6 1657 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 COL5A2P05997 1499 aaPredicted RBP8.92□□□□□ -0.98
TPM3-214ENST00000466010 CRB1P82279 1406 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 EDC4Q6P2E9 1401 aaKnown RBP8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L15C9J2P7 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L10C9JJH3 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L13C9JLJ4 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L12C9JPN9 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L11C9JVI0 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L21D6R901 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L18D6R9N7 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L22D6RA61 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L17D6RBQ6 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L19D6RCP7 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L20D6RJB6 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 RNF40O75150 1001 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 BAG6P46379 1132 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP17L24Q0WX57 530 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 FAM196AQ6ZSG2 479 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 USP35Q9P2H5 1018 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
TPM3-214ENST00000466010 FKBPLQ9UIM3 349 aa8.92□□□□□ -0.98
TPM3-214ENST00000466010 LMO7Q8WWI1 1683 aa8.91□□□□□ -0.98
TPM3-214ENST00000466010 CAMTA1Q9Y6Y1 1673 aa8.91□□□□□ -0.98
TPM3-214ENST00000466010 ATP5J2-PTCD1G3V325 749 aa8.91□□□□□ -0.98
TPM3-214ENST00000466010 PIK3CDO00329 1044 aa8.91□□□□□ -0.98
TPM3-214ENST00000466010 PDE3BQ13370 1112 aa8.91□□□□□ -0.98
TPM3-214ENST00000466010 LYPD8Q6UX82 237 aa8.91□□□□□ -0.98
TPM3-214ENST00000466010 PIK3C2AO00443 1686 aa8.91□□□□□ -0.98
TPM3-214ENST00000466010 DISP2A7MBM2 1401 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 USP31Q70CQ4 1352 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms