RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 ORAI2Q96SN7 254 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 ZBTB3Q9H5J0 574 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 ABCC1P33527 1531 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 ZEB2O60315 1214 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 ANKRD1Q15327 319 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 ZFYVE9O95405 1425 aa11.19□□□□□ -0.62
SCAF11-205ENST00000465950 TSPOAP1O95153 1857 aa11.19□□□□□ -0.62
SCAF11-205ENST00000465950 KIF5BP33176 963 aa11.19□□□□□ -0.62
SCAF11-205ENST00000465950 DUSP27Q5VZP5 1158 aa11.19□□□□□ -0.62
SCAF11-205ENST00000465950 PLEKHG3A1L390 1219 aa11.19□□□□□ -0.62
SCAF11-205ENST00000465950 BAG4O95429 457 aaKnown RBP11.19□□□□□ -0.62
SCAF11-205ENST00000465950 FKBP4Q02790 459 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCAF11-205ENST00000465950 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
SCAF11-205ENST00000465950 MTMR7Q9Y216 660 aa11.19□□□□□ -0.62
SCAF11-205ENST00000465950 IRX3P78415 501 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-205ENST00000465950 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-205ENST00000465950 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 SYCP1Q15431 976 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 OVOS2A0A0G2JMS6 1433 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 OVOS2A0A0J9YW53 1432 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 OVOS2Q6IE36 1432 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 SH3TC1Q8TE82 1336 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 EIF2AK4Q9P2K8 1649 aaKnown RBP11.18□□□□□ -0.62
SCAF11-205ENST00000465950 IMMTQ16891 758 aaKnown RBP11.18□□□□□ -0.62
SCAF11-205ENST00000465950 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 CCDC150Q8NCX0 1101 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 PTPRTO14522 1441 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
SCAF11-205ENST00000465950 ARHGEF10LQ9HCE6 1279 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 SBNO1A3KN83 1393 aa11.18□□□□□ -0.62
SCAF11-205ENST00000465950 ATP5J2-PTCD1G3V325 749 aa11.17□□□□□ -0.62
SCAF11-205ENST00000465950 POTEJP0CG39 1038 aa11.17□□□□□ -0.62
SCAF11-205ENST00000465950 ALDH1L1O75891 902 aa11.17□□□□□ -0.62
SCAF11-205ENST00000465950 VPS72Q15906 364 aa11.17□□□□□ -0.62
SCAF11-205ENST00000465950 ATP2B4P23634 1241 aa11.17□□□□□ -0.62
SCAF11-205ENST00000465950 TTLL6Q8N841 843 aa11.17□□□□□ -0.62
SCAF11-205ENST00000465950 GCC1Q96CN9 775 aa11.17□□□□□ -0.62
SCAF11-205ENST00000465950 RPAP2Q8IXW5 612 aaPredicted RBP11.17□□□□□ -0.62
SCAF11-205ENST00000465950 MATR3P43243 847 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCAF11-205ENST00000465950 GNAQP50148 359 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 MCTP1Q6DN14 999 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 WDR66Q8TBY9 1149 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 NAPBQ9H115 298 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 PZPP20742 1482 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 SAMD9Q5K651 1589 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 MYO5CQ9NQX4 1742 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 IREB2P48200 963 aaKnown RBP11.16□□□□□ -0.62
SCAF11-205ENST00000465950 OSBPP22059 807 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 NBR1Q14596 966 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 STXBP4Q6ZWJ1 553 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 DENND2AQ9ULE3 1009 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 PTPRCP08575 1304 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 KIF20AO95235 890 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 TNNT3P45378 269 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-205ENST00000465950 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-205ENST00000465950 PTPRMP28827 1452 aa11.16□□□□□ -0.62
SCAF11-205ENST00000465950 UFL1O94874 794 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 RAD50Q92878 1312 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 CA8P35219 290 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 HACE1Q8IYU2 909 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 C22orf23Q9BZE7 217 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 ANKARQ7Z5J8 1434 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 M0QZ92 97 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 ZFYP08048 801 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-205ENST00000465950 PES1O00541 588 aaKnown RBP11.15□□□□□ -0.62
SCAF11-205ENST00000465950 CHMP4BP1P59074 171 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 DRC7Q8IY82 874 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 PNMA3Q9UL41 463 aa11.15□□□□□ -0.62
SCAF11-205ENST00000465950 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.63
SCAF11-205ENST00000465950 SRGAP3O43295 1099 aa11.15□□□□□ -0.63
SCAF11-205ENST00000465950 DKC1O60832 514 aaKnown RBP eCLIP11.15□□□□□ -0.63
SCAF11-205ENST00000465950 PDCP20941 246 aa11.15□□□□□ -0.63
SCAF11-205ENST00000465950 KIF1BPQ96EK5 621 aa11.15□□□□□ -0.63
SCAF11-205ENST00000465950 CHMP5Q9NZZ3 219 aa11.15□□□□□ -0.63
SCAF11-205ENST00000465950 HOXC9P31274 260 aa11.14□□□□□ -0.63
SCAF11-205ENST00000465950 NEBLO76041 1014 aa11.14□□□□□ -0.63
SCAF11-205ENST00000465950 LDHBP07195 334 aaKnown RBP11.14□□□□□ -0.63
SCAF11-205ENST00000465950 LRSAM1Q6UWE0 723 aa11.14□□□□□ -0.63
SCAF11-205ENST00000465950 HOXB7P09629 217 aa11.14□□□□□ -0.63
SCAF11-205ENST00000465950 GNAT2P19087 354 aa11.14□□□□□ -0.63
SCAF11-205ENST00000465950 CCDC117Q8IWD4 279 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-205ENST00000465950 TAOK3Q9H2K8 898 aa11.14□□□□□ -0.63
SCAF11-205ENST00000465950 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
SCAF11-205ENST00000465950 PHAXQ9H814 394 aaKnown RBP11.14□□□□□ -0.63
SCAF11-205ENST00000465950 PLCB2Q00722 1185 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 AACSQ86V21 672 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 PRKRIP1Q9H875 184 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-205ENST00000465950 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-205ENST00000465950 CPS1P31327 1500 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 GIGYF1O75420 1035 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-205ENST00000465950 STIM1Q13586 685 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 MAP3K5Q99683 1374 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 MAST1Q9Y2H9 1570 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 WDR17Q8IZU2 1322 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 TMEM266Q2M3C6 531 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 BRINP3Q76B58 766 aa11.13□□□□□ -0.63
SCAF11-205ENST00000465950 NAP1L4Q99733 375 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms