RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
CNOT4-208ENST00000465721 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
CNOT4-208ENST00000465721 NPC1L1Q9UHC9 1359 aa15.9■□□□□ 0.14
CNOT4-208ENST00000465721 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
CNOT4-208ENST00000465721 POTEJP0CG39 1038 aa15.9■□□□□ 0.14
CNOT4-208ENST00000465721 SRGNP10124 158 aa15.9■□□□□ 0.14
CNOT4-208ENST00000465721 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
CNOT4-208ENST00000465721 PRPF40BQ6NWY9 871 aaKnown RBP15.9■□□□□ 0.14
CNOT4-208ENST00000465721 CNBD1Q8NA66 436 aa15.9■□□□□ 0.14
CNOT4-208ENST00000465721 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
CNOT4-208ENST00000465721 NUP98P52948 1817 aa15.89■□□□□ 0.13
CNOT4-208ENST00000465721 A1BGP04217 495 aa15.89■□□□□ 0.13
CNOT4-208ENST00000465721 CHADLQ6NUI6 762 aa15.89■□□□□ 0.13
CNOT4-208ENST00000465721 FMNL2Q96PY5 1086 aa15.89■□□□□ 0.13
CNOT4-208ENST00000465721 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
CNOT4-208ENST00000465721 DDNO94850 711 aaPredicted RBP15.88■□□□□ 0.13
CNOT4-208ENST00000465721 CNKSR1Q969H4 720 aa15.88■□□□□ 0.13
CNOT4-208ENST00000465721 SETDB2Q96T68 719 aa15.88■□□□□ 0.13
CNOT4-208ENST00000465721 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
CNOT4-208ENST00000465721 KCNQ3O43525 872 aa15.87■□□□□ 0.13
CNOT4-208ENST00000465721 ST5P78524 1137 aa15.87■□□□□ 0.13
CNOT4-208ENST00000465721 DZIP3Q86Y13 1208 aaKnown RBP15.87■□□□□ 0.13
CNOT4-208ENST00000465721 CNTNAP1P78357 1384 aa15.87■□□□□ 0.13
CNOT4-208ENST00000465721 KDM3BQ7LBC6 1761 aa15.86■□□□□ 0.13
CNOT4-208ENST00000465721 SOGA3Q5TF21 947 aa15.86■□□□□ 0.13
CNOT4-208ENST00000465721 C7orf43Q8WVR3 580 aa15.86■□□□□ 0.13
CNOT4-208ENST00000465721 MASTLQ96GX5 879 aa15.86■□□□□ 0.13
CNOT4-208ENST00000465721 L3MBTL3Q96JM7 780 aaPredicted RBP15.86■□□□□ 0.13
CNOT4-208ENST00000465721 MKRN1Q9UHC7 482 aaKnown RBP15.86■□□□□ 0.13
CNOT4-208ENST00000465721 PASKQ96RG2 1323 aa15.86■□□□□ 0.13
CNOT4-208ENST00000465721 PIP4K2AP48426 406 aaPredicted RBP15.85■□□□□ 0.13
CNOT4-208ENST00000465721 TRPM7Q96QT4 1865 aa15.84■□□□□ 0.13
CNOT4-208ENST00000465721 NPHP1O15259 732 aa15.84■□□□□ 0.13
CNOT4-208ENST00000465721 PHACTR3Q96KR7 559 aa15.84■□□□□ 0.13
CNOT4-208ENST00000465721 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
CNOT4-208ENST00000465721 ZNF541Q9H0D2 1346 aa15.84■□□□□ 0.13
CNOT4-208ENST00000465721 SNED1Q8TER0 1413 aa15.84■□□□□ 0.13
CNOT4-208ENST00000465721 THSD7BQ9C0I4 1608 aa15.83■□□□□ 0.13
CNOT4-208ENST00000465721 LTBP1Q14766 1721 aa15.83■□□□□ 0.13
CNOT4-208ENST00000465721 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
CNOT4-208ENST00000465721 IQCA1LA6NCM1 817 aa15.83■□□□□ 0.12
CNOT4-208ENST00000465721 BTBD11A6QL63 1104 aa15.83■□□□□ 0.12
CNOT4-208ENST00000465721 CCDC93Q567U6 631 aa15.83■□□□□ 0.12
CNOT4-208ENST00000465721 CLEC4GQ6UXB4 293 aa15.83■□□□□ 0.12
CNOT4-208ENST00000465721 LDHDQ86WU2 507 aa15.83■□□□□ 0.12
CNOT4-208ENST00000465721 RSPH6AQ9H0K4 717 aa15.83■□□□□ 0.12
CNOT4-208ENST00000465721 TAF1DQ9H5J8 278 aaPredicted RBP15.83■□□□□ 0.12
CNOT4-208ENST00000465721 KLRG2A4D1S0 409 aaPredicted RBP15.82■□□□□ 0.12
CNOT4-208ENST00000465721 PRKAR2BP31323 418 aa15.82■□□□□ 0.12
CNOT4-208ENST00000465721 NPM2Q86SE8 214 aaKnown RBP15.82■□□□□ 0.12
CNOT4-208ENST00000465721 NBPF5PQ86XG9 351 aaPredicted RBP15.82■□□□□ 0.12
CNOT4-208ENST00000465721 COL4A5P29400 1685 aa15.82■□□□□ 0.12
CNOT4-208ENST00000465721 FOXN1O15353 648 aa15.81■□□□□ 0.12
CNOT4-208ENST00000465721 NPR1P16066 1061 aa15.81■□□□□ 0.12
CNOT4-208ENST00000465721 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
CNOT4-208ENST00000465721 NBPF26B4DH59 902 aa15.8■□□□□ 0.12
CNOT4-208ENST00000465721 RGL2O15211 777 aa15.8■□□□□ 0.12
CNOT4-208ENST00000465721 FKBP4Q02790 459 aaKnown RBP eCLIP15.8■□□□□ 0.12
CNOT4-208ENST00000465721 NBPF10Q6P3W6 841 aaKnown RBP15.8■□□□□ 0.12
CNOT4-208ENST00000465721 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
CNOT4-208ENST00000465721 NBPF15Q8N660 670 aa15.8■□□□□ 0.12
CNOT4-208ENST00000465721 ZNF277Q9NRM2 450 aaPredicted RBP15.8■□□□□ 0.12
CNOT4-208ENST00000465721 ZNF652Q9Y2D9 606 aa15.8■□□□□ 0.12
CNOT4-208ENST00000465721 ITGBL1O95965 494 aaPredicted RBP15.79■□□□□ 0.12
CNOT4-208ENST00000465721 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
CNOT4-208ENST00000465721 SNRPA1P09661 255 aaKnown RBP15.78■□□□□ 0.12
CNOT4-208ENST00000465721 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
CNOT4-208ENST00000465721 PRDM10Q9NQV6 1147 aa15.78■□□□□ 0.12
CNOT4-208ENST00000465721 NIP7Q9Y221 180 aaKnown RBP eCLIP15.78■□□□□ 0.12
CNOT4-208ENST00000465721 TMEM88BA6NKF7 163 aa15.77■□□□□ 0.12
CNOT4-208ENST00000465721 VEGFBP49765 207 aa15.77■□□□□ 0.12
CNOT4-208ENST00000465721 MCM10Q7L590 875 aa15.77■□□□□ 0.12
CNOT4-208ENST00000465721 HACL1Q9UJ83 578 aa15.77■□□□□ 0.12
CNOT4-208ENST00000465721 LAMB2P55268 1798 aa15.77■□□□□ 0.11
CNOT4-208ENST00000465721 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
CNOT4-208ENST00000465721 EPHX2P34913 555 aa15.76■□□□□ 0.11
CNOT4-208ENST00000465721 EAPPQ56P03 285 aaPredicted RBP15.76■□□□□ 0.11
CNOT4-208ENST00000465721 ANKRD36CQ5JPF3 1778 aa15.76■□□□□ 0.11
CNOT4-208ENST00000465721 RIC1Q4ADV7 1423 aa15.76■□□□□ 0.11
CNOT4-208ENST00000465721 FZD9O00144 591 aa15.75■□□□□ 0.11
CNOT4-208ENST00000465721 IARSP41252 1262 aaKnown RBP15.75■□□□□ 0.11
CNOT4-208ENST00000465721 HLFQ16534 295 aa15.75■□□□□ 0.11
CNOT4-208ENST00000465721 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
CNOT4-208ENST00000465721 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
CNOT4-208ENST00000465721 FAM177BA6PVY3 158 aa15.74■□□□□ 0.11
CNOT4-208ENST00000465721 CTCFP49711 727 aaPredicted RBP15.74■□□□□ 0.11
CNOT4-208ENST00000465721 DCTN1Q14203 1278 aa15.74■□□□□ 0.11
CNOT4-208ENST00000465721 CRY2Q49AN0 593 aa15.74■□□□□ 0.11
CNOT4-208ENST00000465721 CFAP53Q96M91 514 aa15.74■□□□□ 0.11
CNOT4-208ENST00000465721 WBP1LQ9NX94 342 aa15.74■□□□□ 0.11
CNOT4-208ENST00000465721 RASSF10A6NK89 507 aa15.73■□□□□ 0.11
CNOT4-208ENST00000465721 GPC2Q8N158 579 aa15.73■□□□□ 0.11
CNOT4-208ENST00000465721 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
CNOT4-208ENST00000465721 AIDAQ96BJ3 306 aa15.73■□□□□ 0.11
CNOT4-208ENST00000465721 PSMD1Q99460 953 aa15.73■□□□□ 0.11
CNOT4-208ENST00000465721 IBTKQ9P2D0 1353 aaPredicted RBP15.73■□□□□ 0.11
CNOT4-208ENST00000465721 U2AF1L5P0DN76 240 aaPredicted RBP15.72■□□□□ 0.11
CNOT4-208ENST00000465721 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
CNOT4-208ENST00000465721 U2AF1Q01081 240 aaKnown RBP eCLIP15.72■□□□□ 0.11
CNOT4-208ENST00000465721 MAP1SQ66K74 1059 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms