RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 ERC1Q8IUD2 1116 aa15.39■□□□□ 0.05
ARHGEF3-204ENST00000465659 CLASRPQ8N2M8 674 aaKnown RBP15.39■□□□□ 0.05
ARHGEF3-204ENST00000465659 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
ARHGEF3-204ENST00000465659 ZSCAN22P10073 491 aaPredicted RBP15.38■□□□□ 0.05
ARHGEF3-204ENST00000465659 TM6SF1Q9BZW5 370 aa15.38■□□□□ 0.05
ARHGEF3-204ENST00000465659 RNMTO43148 476 aaKnown RBP15.38■□□□□ 0.05
ARHGEF3-204ENST00000465659 GADD45BO75293 160 aaPredicted RBP15.38■□□□□ 0.05
ARHGEF3-204ENST00000465659 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
ARHGEF3-204ENST00000465659 KSR2Q6VAB6 950 aa15.38■□□□□ 0.05
ARHGEF3-204ENST00000465659 ECHDC1Q9NTX5 307 aa15.38■□□□□ 0.05
ARHGEF3-204ENST00000465659 SLIT3O75094 1523 aa15.37■□□□□ 0.05
ARHGEF3-204ENST00000465659 ADAMTS7Q9UKP4 1686 aa15.37■□□□□ 0.05
ARHGEF3-204ENST00000465659 FAM184AQ8NB25 1140 aa15.37■□□□□ 0.05
ARHGEF3-204ENST00000465659 GPATCH3Q96I76 525 aa15.37■□□□□ 0.05
ARHGEF3-204ENST00000465659 GIGYF1O75420 1035 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF3-204ENST00000465659 DIAPH3Q9NSV4 1193 aa15.37■□□□□ 0.05
ARHGEF3-204ENST00000465659 UTYO14607 1347 aa15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 OS9Q13438 667 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 VPS53Q5VIR6 699 aa15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 PXDNQ92626 1479 aa15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 STX6O43752 255 aa15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 UVSSAQ2YD98 709 aa15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 SPG7Q9UQ90 795 aa15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
ARHGEF3-204ENST00000465659 LETM1O95202 739 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 ANXA1P04083 346 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 SYT1P21579 422 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 PSME1Q06323 249 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 MPRIPQ6WCQ1 1025 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 ZSCAN31Q96LW9 406 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 ATP6V1DQ9Y5K8 247 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 CCDC183Q5T5S1 534 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 ARHGEF25Q86VW2 580 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 EVI5LQ96CN4 794 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 GDPD2Q9HCC8 539 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 ZSWIM6Q9HCJ5 1215 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 SH2B1Q9NRF2 756 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 SNRKQ9NRH2 765 aa15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 C9orf78Q9NZ63 289 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF3-204ENST00000465659 CASTP20810 708 aaKnown RBP15.34■□□□□ 0.05
ARHGEF3-204ENST00000465659 UBE2HP62256 183 aa15.34■□□□□ 0.05
ARHGEF3-204ENST00000465659 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
ARHGEF3-204ENST00000465659 LRRC59Q96AG4 307 aaKnown RBP15.34■□□□□ 0.05
ARHGEF3-204ENST00000465659 SMC3Q9UQE7 1217 aa15.34■□□□□ 0.05
ARHGEF3-204ENST00000465659 F13A1P00488 732 aa15.34■□□□□ 0.05
ARHGEF3-204ENST00000465659 RNF214Q8ND24 703 aa15.34■□□□□ 0.05
ARHGEF3-204ENST00000465659 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.05
ARHGEF3-204ENST00000465659 PTH1RQ03431 593 aa15.33■□□□□ 0.05
ARHGEF3-204ENST00000465659 HSP90AA2PQ14568 343 aaPredicted RBP15.33■□□□□ 0.05
ARHGEF3-204ENST00000465659 CSPP1Q1MSJ5 1256 aa15.33■□□□□ 0.05
ARHGEF3-204ENST00000465659 LINS1Q8NG48 757 aa15.33■□□□□ 0.05
ARHGEF3-204ENST00000465659 ZNF142P52746 1687 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF3-204ENST00000465659 HIP1O00291 1037 aa15.33■□□□□ 0.04
ARHGEF3-204ENST00000465659 NECTIN1Q15223 517 aa15.33■□□□□ 0.04
ARHGEF3-204ENST00000465659 PROSER3Q2NL68 480 aa15.33■□□□□ 0.04
ARHGEF3-204ENST00000465659 CNPY2Q9Y2B0 182 aa15.33■□□□□ 0.04
ARHGEF3-204ENST00000465659 PDRG1Q9NUG6 133 aa15.32■□□□□ 0.04
ARHGEF3-204ENST00000465659 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
ARHGEF3-204ENST00000465659 CYP46A1Q9Y6A2 500 aa15.32■□□□□ 0.04
ARHGEF3-204ENST00000465659 CCDC171Q6TFL3 1326 aa15.32■□□□□ 0.04
ARHGEF3-204ENST00000465659 GRM8O00222 908 aa15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 GCP02774 474 aa15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 PDIA4P13667 645 aaKnown RBP15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 FOXD4L6Q3SYB3 417 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 FOXD4L3Q6VB84 417 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 ANKLE2Q86XL3 938 aa15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 JAKMIP1Q96N16 626 aaKnown RBP15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 LARGE1O95461 756 aa15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 ADCK5Q3MIX3 580 aa15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 KAZALD1Q96I82 304 aa15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 PA2G4Q9UQ80 394 aaKnown RBP15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 MRC1P22897 1456 aa15.31■□□□□ 0.04
ARHGEF3-204ENST00000465659 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 PRPF40BQ6NWY9 871 aaKnown RBP15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 MAP4K1Q92918 833 aa15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 DDX21Q9NR30 783 aaKnown RBP eCLIP15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 MTMR6Q9Y217 621 aa15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 DDX58O95786 925 aaKnown RBP15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 AACSQ86V21 672 aa15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 SASH1O94885 1247 aa15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 CPA1P15085 419 aa15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 GJB2P29033 226 aa15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 ANKRD24Q8TF21 1146 aa15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
ARHGEF3-204ENST00000465659 TRPM3Q9HCF6 1732 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF3-204ENST00000465659 XPCQ01831 940 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF3-204ENST00000465659 CREB3L3Q68CJ9 461 aa15.29■□□□□ 0.04
ARHGEF3-204ENST00000465659 CCDC83Q8IWF9 413 aa15.29■□□□□ 0.04
ARHGEF3-204ENST00000465659 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
ARHGEF3-204ENST00000465659 ALDH8A1Q9H2A2 487 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF3-204ENST00000465659 ST3GAL1Q11201 340 aa15.28■□□□□ 0.04
ARHGEF3-204ENST00000465659 G3BP1Q13283 466 aaKnown RBP eCLIP15.28■□□□□ 0.04
ARHGEF3-204ENST00000465659 PDIA6Q15084 440 aa15.28■□□□□ 0.04
ARHGEF3-204ENST00000465659 EAF2Q96CJ1 260 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF3-204ENST00000465659 BICC1Q9H694 974 aaKnown RBP15.28■□□□□ 0.04
ARHGEF3-204ENST00000465659 RBM8AQ9Y5S9 174 aaKnown RBP15.28■□□□□ 0.04
ARHGEF3-204ENST00000465659 ZBTB7CA1YPR0 619 aa15.28■□□□□ 0.04
ARHGEF3-204ENST00000465659 MST1RQ04912 1400 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms