RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 LY75O60449 1722 aa27.33■■□□□ 1.97
ITGA4-204ENST00000465522 LINS1Q8NG48 757 aa27.33■■□□□ 1.96
ITGA4-204ENST00000465522 MYH14Q7Z406 1995 aaKnown RBP27.32■■□□□ 1.96
ITGA4-204ENST00000465522 LINC00116Q8NCU8 138 aa27.32■■□□□ 1.96
ITGA4-204ENST00000465522 ALDH1L1O75891 902 aa27.31■■□□□ 1.96
ITGA4-204ENST00000465522 KIF6Q6ZMV9 814 aa27.31■■□□□ 1.96
ITGA4-204ENST00000465522 COL5A3P25940 1745 aaPredicted RBP27.31■■□□□ 1.96
ITGA4-204ENST00000465522 GNAI3P08754 354 aa27.3■■□□□ 1.96
ITGA4-204ENST00000465522 MYD88Q99836 296 aa27.3■■□□□ 1.96
ITGA4-204ENST00000465522 ZBTB3Q9H5J0 574 aa27.3■■□□□ 1.96
ITGA4-204ENST00000465522 C1orf115Q9H7X2 142 aa27.3■■□□□ 1.96
ITGA4-204ENST00000465522 USP44Q9H0E7 712 aa27.3■■□□□ 1.96
ITGA4-204ENST00000465522 ARFGEF2Q9Y6D5 1785 aa27.29■■□□□ 1.96
ITGA4-204ENST00000465522 EIF5P55010 431 aaKnown RBP27.29■■□□□ 1.96
ITGA4-204ENST00000465522 CWF19L2Q2TBE0 894 aaKnown RBP27.29■■□□□ 1.96
ITGA4-204ENST00000465522 IGKV5-2P06315 115 aa27.27■■□□□ 1.96
ITGA4-204ENST00000465522 RC3H1Q5TC82 1133 aaKnown RBP27.27■■□□□ 1.96
ITGA4-204ENST00000465522 RWDD1Q9H446 243 aaPredicted RBP27.27■■□□□ 1.96
ITGA4-204ENST00000465522 CNTNAP4Q9C0A0 1308 aa27.27■■□□□ 1.96
ITGA4-204ENST00000465522 IGHDP01880 384 aa27.26■■□□□ 1.95
ITGA4-204ENST00000465522 DZIP3Q86Y13 1208 aaKnown RBP27.26■■□□□ 1.95
ITGA4-204ENST00000465522 C9orf78Q9NZ63 289 aaPredicted RBP27.26■■□□□ 1.95
ITGA4-204ENST00000465522 RREB1Q92766 1687 aa27.26■■□□□ 1.95
ITGA4-204ENST00000465522 MAP3K15Q6ZN16 1313 aa27.25■■□□□ 1.95
ITGA4-204ENST00000465522 NEURL1BA8MQ27 555 aa27.25■■□□□ 1.95
ITGA4-204ENST00000465522 APBA3O96018 575 aa27.25■■□□□ 1.95
ITGA4-204ENST00000465522 GNAI2P04899 355 aa27.25■■□□□ 1.95
ITGA4-204ENST00000465522 UBTFL1P0CB47 393 aaPredicted RBP27.25■■□□□ 1.95
ITGA4-204ENST00000465522 SLC27A3Q5K4L6 730 aa27.25■■□□□ 1.95
ITGA4-204ENST00000465522 CENPQQ7L2Z9 268 aaPredicted RBP27.24■■□□□ 1.95
ITGA4-204ENST00000465522 TBC1D2BQ9UPU7 963 aa27.24■■□□□ 1.95
ITGA4-204ENST00000465522 NUP188Q5SRE5 1749 aa27.24■■□□□ 1.95
ITGA4-204ENST00000465522 TAF1LQ8IZX4 1826 aa27.24■■□□□ 1.95
ITGA4-204ENST00000465522 ATP5J2-PTCD1G3V325 749 aa27.24■■□□□ 1.95
ITGA4-204ENST00000465522 LRRC4BQ9NT99 713 aa27.24■■□□□ 1.95
ITGA4-204ENST00000465522 KDM2BQ8NHM5 1336 aa27.23■■□□□ 1.95
ITGA4-204ENST00000465522 PLSCR1O15162 318 aa27.22■■□□□ 1.95
ITGA4-204ENST00000465522 NBPF7P0C2Y1 421 aaPredicted RBP27.22■■□□□ 1.95
ITGA4-204ENST00000465522 HDAC1Q13547 482 aaPredicted RBP27.22■■□□□ 1.95
ITGA4-204ENST00000465522 GIGYF2Q6Y7W6 1299 aaKnown RBP27.22■■□□□ 1.95
ITGA4-204ENST00000465522 ERVV-1B6SEH8 477 aa27.21■■□□□ 1.95
ITGA4-204ENST00000465522 GCKRQ14397 625 aa27.21■■□□□ 1.95
ITGA4-204ENST00000465522 TCIRG1Q13488 830 aa27.21■■□□□ 1.95
ITGA4-204ENST00000465522 RPAP2Q8IXW5 612 aaPredicted RBP27.21■■□□□ 1.95
ITGA4-204ENST00000465522 AFDNP55196 1824 aaKnown RBP27.2■■□□□ 1.95
ITGA4-204ENST00000465522 IBTKQ9P2D0 1353 aaPredicted RBP27.2■■□□□ 1.95
ITGA4-204ENST00000465522 A0A087WZG4 1122 aa27.2■■□□□ 1.94
ITGA4-204ENST00000465522 GRM8O00222 908 aa27.2■■□□□ 1.94
ITGA4-204ENST00000465522 RPS6KA4O75676 772 aa27.2■■□□□ 1.94
ITGA4-204ENST00000465522 HDAC5Q9UQL6 1122 aa27.2■■□□□ 1.94
ITGA4-204ENST00000465522 COL15A1P39059 1388 aa27.2■■□□□ 1.94
ITGA4-204ENST00000465522 HMGB2P26583 209 aaKnown RBP27.19■■□□□ 1.94
ITGA4-204ENST00000465522 HLFQ16534 295 aa27.19■■□□□ 1.94
ITGA4-204ENST00000465522 TXNRD1Q16881 649 aa27.19■■□□□ 1.94
ITGA4-204ENST00000465522 LRRFIP2Q9Y608 721 aaKnown RBP27.19■■□□□ 1.94
ITGA4-204ENST00000465522 GNPATO15228 680 aa27.19■■□□□ 1.94
ITGA4-204ENST00000465522 HSP90AB3PQ58FF7 597 aa27.19■■□□□ 1.94
ITGA4-204ENST00000465522 CEP85Q6P2H3 762 aa27.18■■□□□ 1.94
ITGA4-204ENST00000465522 SIRT2Q8IXJ6 389 aa27.18■■□□□ 1.94
ITGA4-204ENST00000465522 PROM2Q8N271 834 aa27.18■■□□□ 1.94
ITGA4-204ENST00000465522 ANKRD44Q8N8A2 993 aa27.18■■□□□ 1.94
ITGA4-204ENST00000465522 CCDC191Q8NCU4 936 aa27.18■■□□□ 1.94
ITGA4-204ENST00000465522 RTCBQ9Y3I0 505 aaKnown RBP27.18■■□□□ 1.94
ITGA4-204ENST00000465522 ISCA1Q9BUE6 129 aa27.17■■□□□ 1.94
ITGA4-204ENST00000465522 CWC25Q9NXE8 425 aaPredicted RBP27.17■■□□□ 1.94
ITGA4-204ENST00000465522 UTYO14607 1347 aa27.17■■□□□ 1.94
ITGA4-204ENST00000465522 NUP98P52948 1817 aa27.17■■□□□ 1.94
ITGA4-204ENST00000465522 AK7Q96M32 723 aa27.16■■□□□ 1.94
ITGA4-204ENST00000465522 C4BP0C0L5 1744 aa27.16■■□□□ 1.94
ITGA4-204ENST00000465522 TRIM28Q13263 835 aaKnown RBP27.16■■□□□ 1.94
ITGA4-204ENST00000465522 CAMTA2O94983 1202 aa27.14■■□□□ 1.94
ITGA4-204ENST00000465522 TNS1Q9HBL0 1735 aaKnown RBP27.13■■□□□ 1.93
ITGA4-204ENST00000465522 ATP8B2P98198 1209 aa27.13■■□□□ 1.93
ITGA4-204ENST00000465522 SMIM5Q71RC9 77 aa27.13■■□□□ 1.93
ITGA4-204ENST00000465522 HMMRO75330 724 aa27.12■■□□□ 1.93
ITGA4-204ENST00000465522 GPTP24298 496 aa27.12■■□□□ 1.93
ITGA4-204ENST00000465522 UBE3BQ7Z3V4 1068 aa27.11■■□□□ 1.93
ITGA4-204ENST00000465522 H7C1W4 665 aa27.1■■□□□ 1.93
ITGA4-204ENST00000465522 TRAPPC3LQ5T215 181 aa27.1■■□□□ 1.93
ITGA4-204ENST00000465522 JARID2Q92833 1246 aaPredicted RBP27.1■■□□□ 1.93
ITGA4-204ENST00000465522 ZNF652Q9Y2D9 606 aa27.1■■□□□ 1.93
ITGA4-204ENST00000465522 CLEC4GQ6UXB4 293 aa27.1■■□□□ 1.93
ITGA4-204ENST00000465522 ARHGEF1Q92888 912 aaKnown RBP27.1■■□□□ 1.93
ITGA4-204ENST00000465522 SUCLG2Q96I99 432 aa27.1■■□□□ 1.93
ITGA4-204ENST00000465522 ANKRD36CQ5JPF3 1778 aa27.09■■□□□ 1.93
ITGA4-204ENST00000465522 ZPR1O75312 459 aa27.09■■□□□ 1.93
ITGA4-204ENST00000465522 NLRP10Q86W26 655 aa27.09■■□□□ 1.93
ITGA4-204ENST00000465522 ZNF34Q8IZ26 560 aa27.09■■□□□ 1.93
ITGA4-204ENST00000465522 NARFQ9UHQ1 456 aa27.09■■□□□ 1.93
ITGA4-204ENST00000465522 PHF14O94880 888 aa27.08■■□□□ 1.93
ITGA4-204ENST00000465522 AMIGO3Q86WK7 504 aa27.08■■□□□ 1.93
ITGA4-204ENST00000465522 PNMA6EA0A0J9YXQ4 647 aa27.07■■□□□ 1.92
ITGA4-204ENST00000465522 SF3B2Q13435 895 aaKnown RBP27.07■■□□□ 1.92
ITGA4-204ENST00000465522 RTL5Q5HYW3 569 aaPredicted RBP27.07■■□□□ 1.92
ITGA4-204ENST00000465522 SMC5Q8IY18 1101 aa27.07■■□□□ 1.92
ITGA4-204ENST00000465522 GCC1Q96CN9 775 aa27.07■■□□□ 1.92
ITGA4-204ENST00000465522 CASP7P55210 303 aa27.07■■□□□ 1.92
ITGA4-204ENST00000465522 PPP1R42Q7Z4L9 355 aa27.07■■□□□ 1.92
ITGA4-204ENST00000465522 KAZALD1Q96I82 304 aa27.07■■□□□ 1.92
ITGA4-204ENST00000465522 RGL2O15211 777 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms