RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 LAMC2Q13753 1193 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 TMEM132AQ24JP5 1023 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 LRRC69Q6ZNQ3 347 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 OGFOD1Q8N543 542 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 CLUAP1Q96AJ1 413 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 ZNF232Q9UNY5 417 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 PALM3A6NDB9 673 aaPredicted RBP6.39□□□□□ -1.39
SNX4-202ENST00000465505 PCBP4P57723 403 aaKnown RBP6.39□□□□□ -1.39
SNX4-202ENST00000465505 ZNF468Q5VIY5 522 aaPredicted RBP6.39□□□□□ -1.39
SNX4-202ENST00000465505 POTEAQ6S8J7 498 aa6.39□□□□□ -1.39
SNX4-202ENST00000465505 ALYREFQ86V81 257 aaKnown RBP6.39□□□□□ -1.39
SNX4-202ENST00000465505 TSPAN10Q9H1Z9 355 aaPredicted RBP6.39□□□□□ -1.39
SNX4-202ENST00000465505 TFIP11Q9UBB9 837 aaKnown RBP6.39□□□□□ -1.39
SNX4-202ENST00000465505 PRR12Q9ULL5 1215 aa6.39□□□□□ -1.39
SNX4-202ENST00000465505 GNB5O14775 395 aa6.38□□□□□ -1.39
SNX4-202ENST00000465505 PSMA6P60900 246 aaKnown RBP6.38□□□□□ -1.39
SNX4-202ENST00000465505 GRIN2CQ14957 1233 aa6.38□□□□□ -1.39
SNX4-202ENST00000465505 CHSY3Q70JA7 882 aa6.38□□□□□ -1.39
SNX4-202ENST00000465505 SIX5Q8N196 739 aa6.38□□□□□ -1.39
SNX4-202ENST00000465505 HCN4Q9Y3Q4 1203 aa6.38□□□□□ -1.39
SNX4-202ENST00000465505 GPC6Q9Y625 555 aaPredicted RBP6.38□□□□□ -1.39
SNX4-202ENST00000465505 HIRAP54198 1017 aaPredicted RBP6.37□□□□□ -1.39
SNX4-202ENST00000465505 C1orf53Q5VUE5 145 aa6.37□□□□□ -1.39
SNX4-202ENST00000465505 PROSER2Q86WR7 435 aaPredicted RBP6.37□□□□□ -1.39
SNX4-202ENST00000465505 TSEN2Q8NCE0 465 aaKnown RBP6.37□□□□□ -1.39
SNX4-202ENST00000465505 GLMNQ92990 594 aa6.37□□□□□ -1.39
SNX4-202ENST00000465505 MDFIQ99750 246 aa6.37□□□□□ -1.39
SNX4-202ENST00000465505 NEUROD4Q9HD90 331 aa6.37□□□□□ -1.39
SNX4-202ENST00000465505 SFI1A8K8P3 1242 aa6.36□□□□□ -1.39
SNX4-202ENST00000465505 PIK3R2O00459 728 aa6.36□□□□□ -1.39
SNX4-202ENST00000465505 C21orf2O43822 256 aa6.36□□□□□ -1.39
SNX4-202ENST00000465505 SFSWAPQ12872 951 aaKnown RBP6.36□□□□□ -1.39
SNX4-202ENST00000465505 ZNF594Q96JF6 807 aaPredicted RBP6.36□□□□□ -1.39
SNX4-202ENST00000465505 MAFBQ9Y5Q3 323 aaPredicted RBP6.36□□□□□ -1.39
SNX4-202ENST00000465505 RASA1P20936 1047 aa6.35□□□□□ -1.39
SNX4-202ENST00000465505 SYT9Q86SS6 491 aa6.35□□□□□ -1.39
SNX4-202ENST00000465505 RHPN1Q8TCX5 695 aa6.35□□□□□ -1.39
SNX4-202ENST00000465505 PHACTR1Q9C0D0 580 aa6.35□□□□□ -1.39
SNX4-202ENST00000465505 ATAD2Q6PL18 1390 aa6.34□□□□□ -1.39
SNX4-202ENST00000465505 ELOA3CA0A087WX78 387 aaPredicted RBP6.34□□□□□ -1.39
SNX4-202ENST00000465505 ELOA3DA6NLF2 546 aaPredicted RBP6.34□□□□□ -1.39
SNX4-202ENST00000465505 PPP1R12BO60237 982 aaPredicted RBP6.34□□□□□ -1.39
SNX4-202ENST00000465505 ADAM23O75077 832 aa6.34□□□□□ -1.39
SNX4-202ENST00000465505 SIN3BO75182 1162 aa6.34□□□□□ -1.39
SNX4-202ENST00000465505 ELOA3BQ3SY89 546 aa6.34□□□□□ -1.39
SNX4-202ENST00000465505 ZNF280CQ8ND82 737 aa6.34□□□□□ -1.39
SNX4-202ENST00000465505 ELOA3Q8NG57 546 aa6.34□□□□□ -1.39
SNX4-202ENST00000465505 SLC30A3Q99726 388 aa6.34□□□□□ -1.39
SNX4-202ENST00000465505 CHMP3Q9Y3E7 222 aa6.34□□□□□ -1.39
SNX4-202ENST00000465505 A6NJR5 290 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 ADARB2-AS1A8MUL3 147 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 SEC13P55735 322 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 KCNQ4P56696 695 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 KANK4Q5T7N3 995 aaPredicted RBP6.33□□□□□ -1.4
SNX4-202ENST00000465505 STAG2Q8N3U4 1231 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 TRIM11Q96F44 468 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 HSH2DQ96JZ2 352 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 SUSD3Q96L08 255 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 C2orf49Q9BVC5 232 aaPredicted RBP6.33□□□□□ -1.4
SNX4-202ENST00000465505 NOP53Q9NZM5 478 aaKnown RBP6.33□□□□□ -1.4
SNX4-202ENST00000465505 ANKIB1Q9P2G1 1089 aa6.33□□□□□ -1.4
SNX4-202ENST00000465505 RBM19Q9Y4C8 960 aaKnown RBP6.33□□□□□ -1.4
SNX4-202ENST00000465505 C1QTNF9BB2RNN3 333 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 ALAS2P22557 587 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 BAG6P46379 1132 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 CD163Q86VB7 1156 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 ALDH16A1Q8IZ83 802 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 GAS2L2Q8NHY3 880 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 SCG3Q8WXD2 468 aaKnown RBP6.32□□□□□ -1.4
SNX4-202ENST00000465505 TNFRSF25Q93038 417 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 CEP63Q96MT8 703 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 PLVAPQ9BX97 442 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 PPP1R12CQ9BZL4 782 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 BRD7Q9NPI1 651 aa6.32□□□□□ -1.4
SNX4-202ENST00000465505 SPEM2Q0P670 501 aa6.31□□□□□ -1.4
SNX4-202ENST00000465505 PTK7Q13308 1070 aa6.31□□□□□ -1.4
SNX4-202ENST00000465505 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
SNX4-202ENST00000465505 CALR3Q96L12 384 aaKnown RBP6.31□□□□□ -1.4
SNX4-202ENST00000465505 KCNH4Q9UQ05 1017 aa6.31□□□□□ -1.4
SNX4-202ENST00000465505 STARD13Q9Y3M8 1113 aa6.31□□□□□ -1.4
SNX4-202ENST00000465505 CHRNA4P43681 627 aa6.3□□□□□ -1.4
SNX4-202ENST00000465505 TYRO3Q06418 890 aa6.3□□□□□ -1.4
SNX4-202ENST00000465505 COL9A3Q14050 684 aaPredicted RBP6.3□□□□□ -1.4
SNX4-202ENST00000465505 LARP1Q6PKG0 1096 aaKnown RBP6.3□□□□□ -1.4
SNX4-202ENST00000465505 DPYDQ12882 1025 aa6.29□□□□□ -1.4
SNX4-202ENST00000465505 CHMP7Q8WUX9 453 aaPredicted RBP6.29□□□□□ -1.4
SNX4-202ENST00000465505 HINFPQ9BQA5 517 aa6.29□□□□□ -1.4
SNX4-202ENST00000465505 K7ELQ4 463 aaPredicted RBP6.28□□□□□ -1.4
SNX4-202ENST00000465505 M0R082 166 aa6.28□□□□□ -1.4
SNX4-202ENST00000465505 LGR5O75473 907 aa6.28□□□□□ -1.4
SNX4-202ENST00000465505 FURINP09958 794 aa6.28□□□□□ -1.4
SNX4-202ENST00000465505 LMOD1P29536 600 aaPredicted RBP6.28□□□□□ -1.4
SNX4-202ENST00000465505 BTLAQ7Z6A9 289 aa6.28□□□□□ -1.4
SNX4-202ENST00000465505 RAB44Q7Z6P3 723 aaPredicted RBP6.28□□□□□ -1.4
SNX4-202ENST00000465505 ANKMY2Q8IV38 441 aa6.28□□□□□ -1.4
SNX4-202ENST00000465505 MICALL1Q8N3F8 863 aa6.28□□□□□ -1.4
SNX4-202ENST00000465505 ZNF417Q8TAU3 575 aa6.28□□□□□ -1.4
SNX4-202ENST00000465505 ZNF587Q96SQ5 575 aaPredicted RBP6.28□□□□□ -1.4
SNX4-202ENST00000465505 VRTNQ9H8Y1 702 aa6.28□□□□□ -1.4
SNX4-202ENST00000465505 PRDM6Q9NQX0 595 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms