RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 C10orf71Q711Q0 1435 aa26.28■■□□□ 1.8
SKA3-205ENST00000465471 ERVV-1B6SEH8 477 aa26.27■■□□□ 1.8
SKA3-205ENST00000465471 TWISTNBQ3B726 338 aaPredicted RBP26.27■■□□□ 1.8
SKA3-205ENST00000465471 TBC1D9BQ66K14 1250 aa26.27■■□□□ 1.8
SKA3-205ENST00000465471 SYT17Q9BSW7 474 aa26.27■■□□□ 1.8
SKA3-205ENST00000465471 MAP3K15Q6ZN16 1313 aa26.27■■□□□ 1.8
SKA3-205ENST00000465471 PARP3Q9Y6F1 533 aa26.26■■□□□ 1.79
SKA3-205ENST00000465471 KIAA1551Q9HCM1 1747 aa26.25■■□□□ 1.79
SKA3-205ENST00000465471 E9PSI1 815 aa26.25■■□□□ 1.79
SKA3-205ENST00000465471 EXOSC9Q06265 439 aaKnown RBP26.25■■□□□ 1.79
SKA3-205ENST00000465471 CHMP4AQ9BY43 222 aa26.25■■□□□ 1.79
SKA3-205ENST00000465471 ZNF652Q9Y2D9 606 aa26.25■■□□□ 1.79
SKA3-205ENST00000465471 CD2APQ9Y5K6 639 aa26.25■■□□□ 1.79
SKA3-205ENST00000465471 ATP10DQ9P241 1426 aa26.24■■□□□ 1.79
SKA3-205ENST00000465471 SLFN5Q08AF3 891 aa26.24■■□□□ 1.79
SKA3-205ENST00000465471 HLFQ16534 295 aa26.24■■□□□ 1.79
SKA3-205ENST00000465471 KIF6Q6ZMV9 814 aa26.24■■□□□ 1.79
SKA3-205ENST00000465471 CARMIL3Q8ND23 1372 aa26.23■■□□□ 1.79
SKA3-205ENST00000465471 CCDC30Q5VVM6 783 aa26.23■■□□□ 1.79
SKA3-205ENST00000465471 XAGE3Q8WTP9 111 aa26.23■■□□□ 1.79
SKA3-205ENST00000465471 HYPKQ9NX55 129 aa26.23■■□□□ 1.79
SKA3-205ENST00000465471 VAMP4O75379 141 aa26.22■■□□□ 1.79
SKA3-205ENST00000465471 COPS6Q7L5N1 327 aa26.22■■□□□ 1.79
SKA3-205ENST00000465471 TRMT2AQ8IZ69 625 aaKnown RBP26.22■■□□□ 1.79
SKA3-205ENST00000465471 ANKRD36CQ5JPF3 1778 aa26.22■■□□□ 1.79
SKA3-205ENST00000465471 CACNA1FO60840 1977 aa26.21■■□□□ 1.79
SKA3-205ENST00000465471 CDCA7LQ96GN5 454 aa26.21■■□□□ 1.79
SKA3-205ENST00000465471 GIGYF2Q6Y7W6 1299 aaKnown RBP26.2■■□□□ 1.78
SKA3-205ENST00000465471 ZBTB3Q9H5J0 574 aa26.2■■□□□ 1.78
SKA3-205ENST00000465471 SERPINB2P05120 415 aa26.19■■□□□ 1.78
SKA3-205ENST00000465471 BICDL1Q6ZP65 573 aa26.19■■□□□ 1.78
SKA3-205ENST00000465471 NLGN2Q8NFZ4 835 aa26.19■■□□□ 1.78
SKA3-205ENST00000465471 ARFGEF2Q9Y6D5 1785 aa26.18■■□□□ 1.78
SKA3-205ENST00000465471 HNRNPUQ00839 825 aaKnown RBP eCLIP26.18■■□□□ 1.78
SKA3-205ENST00000465471 KLHL34Q8N239 644 aa26.18■■□□□ 1.78
SKA3-205ENST00000465471 SETDB2Q96T68 719 aa26.18■■□□□ 1.78
SKA3-205ENST00000465471 AIMP1Q12904 312 aaKnown RBP26.17■■□□□ 1.78
SKA3-205ENST00000465471 PXDNLA1KZ92 1463 aa26.17■■□□□ 1.78
SKA3-205ENST00000465471 PHAXQ9H814 394 aaKnown RBP26.16■■□□□ 1.78
SKA3-205ENST00000465471 NIP7Q9Y221 180 aaKnown RBP eCLIP26.16■■□□□ 1.78
SKA3-205ENST00000465471 ANKRD31Q8N7Z5 1873 aa26.16■■□□□ 1.78
SKA3-205ENST00000465471 ZNF34Q8IZ26 560 aa26.15■■□□□ 1.78
SKA3-205ENST00000465471 PLBD2Q8NHP8 589 aa26.15■■□□□ 1.78
SKA3-205ENST00000465471 STK31Q9BXU1 1019 aa26.15■■□□□ 1.78
SKA3-205ENST00000465471 PRR5LQ6MZQ0 368 aa26.14■■□□□ 1.78
SKA3-205ENST00000465471 IBTKQ9P2D0 1353 aaPredicted RBP26.14■■□□□ 1.78
SKA3-205ENST00000465471 N4BP2Q86UW6 1770 aaPredicted RBP26.14■■□□□ 1.78
SKA3-205ENST00000465471 UBN2Q6ZU65 1347 aa26.14■■□□□ 1.77
SKA3-205ENST00000465471 BRCA1P38398 1863 aaKnown RBP26.13■■□□□ 1.77
SKA3-205ENST00000465471 ANKRD13DQ6ZTN6 518 aa26.13■■□□□ 1.77
SKA3-205ENST00000465471 ZBED9Q6R2W3 1325 aa26.13■■□□□ 1.77
SKA3-205ENST00000465471 TCERG1O14776 1098 aaKnown RBP26.12■■□□□ 1.77
SKA3-205ENST00000465471 TGFB2P61812 414 aa26.12■■□□□ 1.77
SKA3-205ENST00000465471 DLEC1Q9Y238 1755 aa26.11■■□□□ 1.77
SKA3-205ENST00000465471 SLC4A2P04920 1241 aa26.1■■□□□ 1.77
SKA3-205ENST00000465471 TCIRG1Q13488 830 aa26.1■■□□□ 1.77
SKA3-205ENST00000465471 HSP90AB3PQ58FF7 597 aa26.1■■□□□ 1.77
SKA3-205ENST00000465471 CNBD1Q8NA66 436 aa26.1■■□□□ 1.77
SKA3-205ENST00000465471 GPTP24298 496 aa26.09■■□□□ 1.77
SKA3-205ENST00000465471 G2E3Q7L622 706 aa26.09■■□□□ 1.77
SKA3-205ENST00000465471 NBPF5PQ86XG9 351 aaPredicted RBP26.09■■□□□ 1.77
SKA3-205ENST00000465471 COL11A2P13942 1736 aaPredicted RBP26.08■■□□□ 1.77
SKA3-205ENST00000465471 PARP10Q53GL7 1025 aa26.08■■□□□ 1.77
SKA3-205ENST00000465471 GOLGB1Q14789 3259 aaKnown RBP26.07■■□□□ 1.76
SKA3-205ENST00000465471 ADCY9O60503 1353 aa26.07■■□□□ 1.76
SKA3-205ENST00000465471 RIC1Q4ADV7 1423 aa26.06■■□□□ 1.76
SKA3-205ENST00000465471 NTSR2O95665 410 aa26.06■■□□□ 1.76
SKA3-205ENST00000465471 DDX58O95786 925 aaKnown RBP26.06■■□□□ 1.76
SKA3-205ENST00000465471 CT47B1P0C2W7 299 aaPredicted RBP26.06■■□□□ 1.76
SKA3-205ENST00000465471 FLIIQ13045 1269 aa26.06■■□□□ 1.76
SKA3-205ENST00000465471 SUSD4Q5VX71 490 aa26.06■■□□□ 1.76
SKA3-205ENST00000465471 TPTE2Q6XPS3 522 aa26.06■■□□□ 1.76
SKA3-205ENST00000465471 ZNF428Q96B54 188 aa26.06■■□□□ 1.76
SKA3-205ENST00000465471 ISCA1Q9BUE6 129 aa26.06■■□□□ 1.76
SKA3-205ENST00000465471 BRIP1Q9BX63 1249 aa26.06■■□□□ 1.76
SKA3-205ENST00000465471 DPEP1P16444 411 aa26.05■■□□□ 1.76
SKA3-205ENST00000465471 KCNA3P22001 575 aa26.05■■□□□ 1.76
SKA3-205ENST00000465471 ST5P78524 1137 aa26.05■■□□□ 1.76
SKA3-205ENST00000465471 RIC3Q7Z5B4 369 aa26.05■■□□□ 1.76
SKA3-205ENST00000465471 NLRP10Q86W26 655 aa26.05■■□□□ 1.76
SKA3-205ENST00000465471 NYXQ9GZU5 481 aa26.05■■□□□ 1.76
SKA3-205ENST00000465471 TNRC6CQ9HCJ0 1690 aaKnown RBP26.05■■□□□ 1.76
SKA3-205ENST00000465471 A0A0G2JLW4 131 aa26.04■■□□□ 1.76
SKA3-205ENST00000465471 TRIM28Q13263 835 aaKnown RBP26.04■■□□□ 1.76
SKA3-205ENST00000465471 KSR2Q6VAB6 950 aa26.04■■□□□ 1.76
SKA3-205ENST00000465471 CCDC24Q8N4L8 307 aa26.04■■□□□ 1.76
SKA3-205ENST00000465471 ABCC12Q96J65 1359 aa26.04■■□□□ 1.76
SKA3-205ENST00000465471 RNF123Q5XPI4 1314 aa26.03■■□□□ 1.76
SKA3-205ENST00000465471 KLRG2A4D1S0 409 aaPredicted RBP26.02■■□□□ 1.76
SKA3-205ENST00000465471 PI4KAP2A4QPH2 592 aa26.02■■□□□ 1.76
SKA3-205ENST00000465471 FAM177BA6PVY3 158 aa26.02■■□□□ 1.76
SKA3-205ENST00000465471 CHRNA5P30532 468 aa26.02■■□□□ 1.76
SKA3-205ENST00000465471 PPP1R42Q7Z4L9 355 aa26.02■■□□□ 1.76
SKA3-205ENST00000465471 PI4KAP1Q8N8J0 262 aa26.02■■□□□ 1.76
SKA3-205ENST00000465471 METTL22Q9BUU2 404 aaPredicted RBP26.02■■□□□ 1.76
SKA3-205ENST00000465471 MAP3K2Q9Y2U5 619 aa26.02■■□□□ 1.76
SKA3-205ENST00000465471 UTRNP46939 3433 aa26.01■■□□□ 1.75
SKA3-205ENST00000465471 PDE6BP35913 854 aa26.01■■□□□ 1.75
SKA3-205ENST00000465471 PDZRN3Q9UPQ7 1066 aa26.01■■□□□ 1.75
SKA3-205ENST00000465471 NPHP1O15259 732 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms