RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 ARFGEF1Q9Y6D6 1849 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 SBF1O95248 1867 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 C5P01031 1676 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 GLTPD2A6NH11 291 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 HTATSF1O43719 755 aaKnown RBP10.51□□□□□ -0.73
UBE4B-205ENST00000465408 DPEP1P16444 411 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 TGFB2P61812 414 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 IL17REQ8NFR9 667 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 SYTL4Q96C24 671 aaPredicted RBP10.51□□□□□ -0.73
UBE4B-205ENST00000465408 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
UBE4B-205ENST00000465408 POTEIP0CG38 1075 aa10.5□□□□□ -0.73
UBE4B-205ENST00000465408 POTEJP0CG39 1038 aa10.5□□□□□ -0.73
UBE4B-205ENST00000465408 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
UBE4B-205ENST00000465408 ARHGAP45Q92619 1136 aa10.5□□□□□ -0.73
UBE4B-205ENST00000465408 API5Q9BZZ5 524 aaKnown RBP10.5□□□□□ -0.73
UBE4B-205ENST00000465408 RWDD1Q9H446 243 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-205ENST00000465408 PASKQ96RG2 1323 aa10.5□□□□□ -0.73
UBE4B-205ENST00000465408 PRIM1P49642 420 aaKnown RBP10.49□□□□□ -0.73
UBE4B-205ENST00000465408 FXR1P51114 621 aaKnown RBP eCLIP10.49□□□□□ -0.73
UBE4B-205ENST00000465408 ZNF530Q6P9A1 599 aaPredicted RBP10.49□□□□□ -0.73
UBE4B-205ENST00000465408 DCAF5Q96JK2 942 aa10.49□□□□□ -0.73
UBE4B-205ENST00000465408 BACH2Q9BYV9 841 aa10.49□□□□□ -0.73
UBE4B-205ENST00000465408 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
UBE4B-205ENST00000465408 ABCC4O15439 1325 aa10.49□□□□□ -0.73
UBE4B-205ENST00000465408 PITPNM2Q9BZ72 1349 aa10.49□□□□□ -0.73
UBE4B-205ENST00000465408 PHF14O94880 888 aa10.48□□□□□ -0.73
UBE4B-205ENST00000465408 KCNA3P22001 575 aa10.48□□□□□ -0.73
UBE4B-205ENST00000465408 DGKZQ13574 1117 aa10.48□□□□□ -0.73
UBE4B-205ENST00000465408 PLEKHO1Q53GL0 409 aaPredicted RBP10.48□□□□□ -0.73
UBE4B-205ENST00000465408 NPM2Q86SE8 214 aaKnown RBP10.48□□□□□ -0.73
UBE4B-205ENST00000465408 C1orf115Q9H7X2 142 aa10.48□□□□□ -0.73
UBE4B-205ENST00000465408 ZBTB40Q9NUA8 1239 aa10.48□□□□□ -0.73
UBE4B-205ENST00000465408 WDR33Q9C0J8 1336 aaKnown RBP10.48□□□□□ -0.73
UBE4B-205ENST00000465408 NCAPD2Q15021 1401 aa10.48□□□□□ -0.73
UBE4B-205ENST00000465408 DOT1LQ8TEK3 1739 aa10.47□□□□□ -0.73
UBE4B-205ENST00000465408 TMEM88BA6NKF7 163 aa10.47□□□□□ -0.73
UBE4B-205ENST00000465408 RASSF7Q02833 373 aa10.47□□□□□ -0.73
UBE4B-205ENST00000465408 TAF7Q15545 349 aaPredicted RBP10.47□□□□□ -0.73
UBE4B-205ENST00000465408 LGR6Q9HBX8 967 aa10.47□□□□□ -0.73
UBE4B-205ENST00000465408 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
UBE4B-205ENST00000465408 ZC3H4Q9UPT8 1303 aaKnown RBP10.47□□□□□ -0.73
UBE4B-205ENST00000465408 LTBP1Q14766 1721 aa10.47□□□□□ -0.73
UBE4B-205ENST00000465408 RGPD2P0DJD1 1756 aa10.47□□□□□ -0.73
UBE4B-205ENST00000465408 RASSF10A6NK89 507 aa10.46□□□□□ -0.73
UBE4B-205ENST00000465408 MMP10P09238 476 aa10.46□□□□□ -0.73
UBE4B-205ENST00000465408 IL2RBP14784 551 aa10.46□□□□□ -0.73
UBE4B-205ENST00000465408 HDAC1Q13547 482 aaPredicted RBP10.46□□□□□ -0.73
UBE4B-205ENST00000465408 G2E3Q7L622 706 aa10.46□□□□□ -0.73
UBE4B-205ENST00000465408 KDM6AO15550 1401 aaPredicted RBP10.46□□□□□ -0.74
UBE4B-205ENST00000465408 SZT2Q5T011 3432 aa10.46□□□□□ -0.74
UBE4B-205ENST00000465408 TAF1LQ8IZX4 1826 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 THSD7BQ9C0I4 1608 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 ZBTB7BO15156 539 aaPredicted RBP10.45□□□□□ -0.74
UBE4B-205ENST00000465408 SLC4A2P04920 1241 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 DEFB115Q30KQ5 88 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 AKAP4Q5JQC9 854 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 MPRIPQ6WCQ1 1025 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 SLC17A8Q8NDX2 589 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 NLRP2Q9NX02 1062 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 CASP8AP2Q9UKL3 1982 aa10.45□□□□□ -0.74
UBE4B-205ENST00000465408 UBR3Q6ZT12 1888 aa10.44□□□□□ -0.74
UBE4B-205ENST00000465408 CEMIPQ8WUJ3 1361 aa10.44□□□□□ -0.74
UBE4B-205ENST00000465408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.44□□□□□ -0.74
UBE4B-205ENST00000465408 ANP32AP39687 249 aaKnown RBP10.44□□□□□ -0.74
UBE4B-205ENST00000465408 C8orf34Q49A92 452 aa10.44□□□□□ -0.74
UBE4B-205ENST00000465408 AMOTQ4VCS5 1084 aa10.44□□□□□ -0.74
UBE4B-205ENST00000465408 C1orf141Q5JVX7 400 aa10.44□□□□□ -0.74
UBE4B-205ENST00000465408 DDX54Q8TDD1 881 aaKnown RBP10.44□□□□□ -0.74
UBE4B-205ENST00000465408 C4BP0C0L5 1744 aa10.44□□□□□ -0.74
UBE4B-205ENST00000465408 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
UBE4B-205ENST00000465408 ADAMTS7Q9UKP4 1686 aa10.44□□□□□ -0.74
UBE4B-205ENST00000465408 PTPRCP08575 1304 aa10.43□□□□□ -0.74
UBE4B-205ENST00000465408 RNMTO43148 476 aaKnown RBP10.43□□□□□ -0.74
UBE4B-205ENST00000465408 KCNQ3O43525 872 aa10.43□□□□□ -0.74
UBE4B-205ENST00000465408 TEFQ10587 303 aa10.43□□□□□ -0.74
UBE4B-205ENST00000465408 BEGAINQ9BUH8 593 aa10.43□□□□□ -0.74
UBE4B-205ENST00000465408 STK31Q9BXU1 1019 aa10.43□□□□□ -0.74
UBE4B-205ENST00000465408 CHMP4BQ9H444 224 aaKnown RBP10.43□□□□□ -0.74
UBE4B-205ENST00000465408 BABAM1Q9NWV8 329 aa10.43□□□□□ -0.74
UBE4B-205ENST00000465408 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
UBE4B-205ENST00000465408 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
UBE4B-205ENST00000465408 INTS3Q68E01 1043 aaKnown RBP10.42□□□□□ -0.74
UBE4B-205ENST00000465408 SMC5Q8IY18 1101 aa10.42□□□□□ -0.74
UBE4B-205ENST00000465408 RAPGEF4Q8WZA2 1011 aa10.42□□□□□ -0.74
UBE4B-205ENST00000465408 AK7Q96M32 723 aa10.42□□□□□ -0.74
UBE4B-205ENST00000465408 PIM2Q9P1W9 311 aa10.42□□□□□ -0.74
UBE4B-205ENST00000465408 BTBD11A6QL63 1104 aa10.41□□□□□ -0.74
UBE4B-205ENST00000465408 F6X3S4 739 aa10.41□□□□□ -0.74
UBE4B-205ENST00000465408 EIF4A1P60842 406 aaKnown RBP10.41□□□□□ -0.74
UBE4B-205ENST00000465408 HDGFL1Q5TGJ6 251 aa10.41□□□□□ -0.74
UBE4B-205ENST00000465408 CCDC30Q5VVM6 783 aa10.41□□□□□ -0.74
UBE4B-205ENST00000465408 MEGF6O75095 1541 aa10.41□□□□□ -0.74
UBE4B-205ENST00000465408 FAM208AQ9UK61 1670 aaKnown RBP10.41□□□□□ -0.74
UBE4B-205ENST00000465408 ITGBL1O95965 494 aaPredicted RBP10.4□□□□□ -0.74
UBE4B-205ENST00000465408 LMNB1P20700 586 aa10.4□□□□□ -0.74
UBE4B-205ENST00000465408 FLIIQ13045 1269 aa10.4□□□□□ -0.74
UBE4B-205ENST00000465408 SLC4A10Q6U841 1118 aa10.4□□□□□ -0.74
UBE4B-205ENST00000465408 SIRT2Q8IXJ6 389 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms