RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 RAD21O60216 631 aa8.61□□□□□ -1.03
VPS8-217ENST00000465213 ITGB7P26010 798 aa8.61□□□□□ -1.03
VPS8-217ENST00000465213 POTEAQ6S8J7 498 aa8.61□□□□□ -1.03
VPS8-217ENST00000465213 SLC9A9Q8IVB4 645 aa8.61□□□□□ -1.03
VPS8-217ENST00000465213 USP17L5A8MUK1 530 aa8.6□□□□□ -1.03
VPS8-217ENST00000465213 ALAS2P22557 587 aa8.6□□□□□ -1.03
VPS8-217ENST00000465213 PSME1Q06323 249 aa8.6□□□□□ -1.03
VPS8-217ENST00000465213 LRRC69Q6ZNQ3 347 aa8.6□□□□□ -1.03
VPS8-217ENST00000465213 TNFRSF25Q93038 417 aa8.6□□□□□ -1.03
VPS8-217ENST00000465213 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
VPS8-217ENST00000465213 HIRAP54198 1017 aaPredicted RBP8.59□□□□□ -1.03
VPS8-217ENST00000465213 TRIM50Q86XT4 487 aa8.59□□□□□ -1.03
VPS8-217ENST00000465213 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
VPS8-217ENST00000465213 SERTM1A2A2V5 107 aa8.58□□□□□ -1.04
VPS8-217ENST00000465213 SPDYE3A6NKU9 549 aa8.58□□□□□ -1.04
VPS8-217ENST00000465213 GATA4P43694 442 aa8.58□□□□□ -1.04
VPS8-217ENST00000465213 C1orf53Q5VUE5 145 aa8.58□□□□□ -1.04
VPS8-217ENST00000465213 WWC1Q8IX03 1113 aa8.58□□□□□ -1.04
VPS8-217ENST00000465213 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
VPS8-217ENST00000465213 CLUAP1Q96AJ1 413 aa8.58□□□□□ -1.04
VPS8-217ENST00000465213 ZBTB7BO15156 539 aaPredicted RBP8.57□□□□□ -1.04
VPS8-217ENST00000465213 COL9A3Q14050 684 aaPredicted RBP8.57□□□□□ -1.04
VPS8-217ENST00000465213 DEPDC4Q8N2C3 294 aa8.57□□□□□ -1.04
VPS8-217ENST00000465213 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
VPS8-217ENST00000465213 KCNQ4P56696 695 aa8.56□□□□□ -1.04
VPS8-217ENST00000465213 PSMA6P60900 246 aaKnown RBP8.56□□□□□ -1.04
VPS8-217ENST00000465213 SFSWAPQ12872 951 aaKnown RBP8.56□□□□□ -1.04
VPS8-217ENST00000465213 DOC2BQ14184 412 aa8.56□□□□□ -1.04
VPS8-217ENST00000465213 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
VPS8-217ENST00000465213 SLC30A3Q99726 388 aa8.56□□□□□ -1.04
VPS8-217ENST00000465213 NEUROD4Q9HD90 331 aa8.56□□□□□ -1.04
VPS8-217ENST00000465213 KIAA1024Q9UPX6 916 aa8.56□□□□□ -1.04
VPS8-217ENST00000465213 STARD13Q9Y3M8 1113 aa8.56□□□□□ -1.04
VPS8-217ENST00000465213 M0R2N6 131 aa8.55□□□□□ -1.04
VPS8-217ENST00000465213 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
VPS8-217ENST00000465213 SPEM2Q0P670 501 aa8.55□□□□□ -1.04
VPS8-217ENST00000465213 PRRT3Q5FWE3 981 aa8.55□□□□□ -1.04
VPS8-217ENST00000465213 TBCELQ5QJ74 424 aa8.55□□□□□ -1.04
VPS8-217ENST00000465213 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
VPS8-217ENST00000465213 TPCN2Q8NHX9 752 aa8.55□□□□□ -1.04
VPS8-217ENST00000465213 RHPN1Q8TCX5 695 aa8.55□□□□□ -1.04
VPS8-217ENST00000465213 SEMA6BQ9H3T3 888 aa8.55□□□□□ -1.04
VPS8-217ENST00000465213 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
VPS8-217ENST00000465213 M0R082 166 aa8.54□□□□□ -1.04
VPS8-217ENST00000465213 CLDN10P78369 228 aa8.54□□□□□ -1.04
VPS8-217ENST00000465213 ZNF417Q8TAU3 575 aa8.54□□□□□ -1.04
VPS8-217ENST00000465213 ADAMTS19Q8TE59 1207 aa8.54□□□□□ -1.04
VPS8-217ENST00000465213 ZNF587Q96SQ5 575 aaPredicted RBP8.54□□□□□ -1.04
VPS8-217ENST00000465213 ANKIB1Q9P2G1 1089 aa8.54□□□□□ -1.04
VPS8-217ENST00000465213 USP17L3A6NCW0 530 aa8.53□□□□□ -1.04
VPS8-217ENST00000465213 USP17L4A6NCW7 530 aa8.53□□□□□ -1.04
VPS8-217ENST00000465213 ALBP02768 609 aa8.53□□□□□ -1.04
VPS8-217ENST00000465213 NEUROD1Q13562 356 aa8.53□□□□□ -1.04
VPS8-217ENST00000465213 CCDC102BQ68D86 513 aa8.53□□□□□ -1.04
VPS8-217ENST00000465213 USP17L2Q6R6M4 530 aa8.53□□□□□ -1.04
VPS8-217ENST00000465213 USP17L1Q7RTZ2 530 aa8.53□□□□□ -1.04
VPS8-217ENST00000465213 MICALL1Q8N3F8 863 aa8.53□□□□□ -1.04
VPS8-217ENST00000465213 TSPAN10Q9H1Z9 355 aaPredicted RBP8.53□□□□□ -1.04
VPS8-217ENST00000465213 NID1P14543 1247 aa8.52□□□□□ -1.05
VPS8-217ENST00000465213 ADH7P40394 386 aa8.52□□□□□ -1.05
VPS8-217ENST00000465213 TYRO3Q06418 890 aa8.52□□□□□ -1.05
VPS8-217ENST00000465213 RSPO4Q2I0M5 234 aaPredicted RBP8.52□□□□□ -1.05
VPS8-217ENST00000465213 NKAPLQ5M9Q1 402 aa8.52□□□□□ -1.05
VPS8-217ENST00000465213 C20orf204Q6ZNR8 217 aa8.52□□□□□ -1.05
VPS8-217ENST00000465213 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
VPS8-217ENST00000465213 UCN2Q96RP3 112 aa8.52□□□□□ -1.05
VPS8-217ENST00000465213 BRD7Q9NPI1 651 aa8.52□□□□□ -1.05
VPS8-217ENST00000465213 A6NJR5 290 aa8.51□□□□□ -1.05
VPS8-217ENST00000465213 APBA3O96018 575 aa8.51□□□□□ -1.05
VPS8-217ENST00000465213 PROSER2Q86WR7 435 aaPredicted RBP8.51□□□□□ -1.05
VPS8-217ENST00000465213 SIX5Q8N196 739 aa8.51□□□□□ -1.05
VPS8-217ENST00000465213 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
VPS8-217ENST00000465213 PHACTR1Q9C0D0 580 aa8.51□□□□□ -1.05
VPS8-217ENST00000465213 CHMP3Q9Y3E7 222 aa8.51□□□□□ -1.05
VPS8-217ENST00000465213 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
VPS8-217ENST00000465213 ATP9BO43861 1147 aa8.5□□□□□ -1.05
VPS8-217ENST00000465213 HSH2DQ96JZ2 352 aa8.5□□□□□ -1.05
VPS8-217ENST00000465213 CEP63Q96MT8 703 aa8.5□□□□□ -1.05
VPS8-217ENST00000465213 NACC1Q96RE7 527 aa8.5□□□□□ -1.05
VPS8-217ENST00000465213 KCNH4Q9UQ05 1017 aa8.5□□□□□ -1.05
VPS8-217ENST00000465213 DKK1O94907 266 aa8.49□□□□□ -1.05
VPS8-217ENST00000465213 STAG2Q8N3U4 1231 aa8.49□□□□□ -1.05
VPS8-217ENST00000465213 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
VPS8-217ENST00000465213 SUSD3Q96L08 255 aa8.49□□□□□ -1.05
VPS8-217ENST00000465213 TPSG1Q9NRR2 321 aa8.49□□□□□ -1.05
VPS8-217ENST00000465213 TRIM28Q13263 835 aaKnown RBP8.48□□□□□ -1.05
VPS8-217ENST00000465213 ZMYM1Q5SVZ6 1142 aa8.48□□□□□ -1.05
VPS8-217ENST00000465213 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
VPS8-217ENST00000465213 C8orf86Q6ZUL3 223 aa8.48□□□□□ -1.05
VPS8-217ENST00000465213 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
VPS8-217ENST00000465213 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
VPS8-217ENST00000465213 HCN4Q9Y3Q4 1203 aa8.48□□□□□ -1.05
VPS8-217ENST00000465213 GTF3C3Q9Y5Q9 886 aa8.48□□□□□ -1.05
VPS8-217ENST00000465213 SFI1A8K8P3 1242 aa8.47□□□□□ -1.05
VPS8-217ENST00000465213 FAM229AH3BQW9 127 aa8.47□□□□□ -1.05
VPS8-217ENST00000465213 C21orf2O43822 256 aa8.47□□□□□ -1.05
VPS8-217ENST00000465213 RAB44Q7Z6P3 723 aaPredicted RBP8.47□□□□□ -1.05
VPS8-217ENST00000465213 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
VPS8-217ENST00000465213 DYRK3O43781 588 aa8.46□□□□□ -1.06
VPS8-217ENST00000465213 HIF1AQ16665 826 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms