RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 SCN4AP35499 1836 aa14.69□□□□□ -0.06
COL11A1-207ENST00000465209 CNGB1Q14028 1251 aaPredicted RBP14.69□□□□□ -0.06
COL11A1-207ENST00000465209 STYK1Q6J9G0 422 aa14.69□□□□□ -0.06
COL11A1-207ENST00000465209 PRPF40BQ6NWY9 871 aaKnown RBP14.69□□□□□ -0.06
COL11A1-207ENST00000465209 DZIP3Q86Y13 1208 aaKnown RBP14.69□□□□□ -0.06
COL11A1-207ENST00000465209 ADAMTSL1Q8N6G6 1762 aa14.69□□□□□ -0.06
COL11A1-207ENST00000465209 SNED1Q8TER0 1413 aa14.68□□□□□ -0.06
COL11A1-207ENST00000465209 C7orf43Q8WVR3 580 aa14.68□□□□□ -0.06
COL11A1-207ENST00000465209 SETDB2Q96T68 719 aa14.68□□□□□ -0.06
COL11A1-207ENST00000465209 TAOK3Q9H2K8 898 aa14.68□□□□□ -0.06
COL11A1-207ENST00000465209 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
COL11A1-207ENST00000465209 NUP98P52948 1817 aa14.67□□□□□ -0.06
COL11A1-207ENST00000465209 KLRG2A4D1S0 409 aaPredicted RBP14.67□□□□□ -0.06
COL11A1-207ENST00000465209 NBPF26B4DH59 902 aa14.67□□□□□ -0.06
COL11A1-207ENST00000465209 ERFEQ4G0M1 354 aa14.67□□□□□ -0.06
COL11A1-207ENST00000465209 NBPF10Q6P3W6 841 aaKnown RBP14.67□□□□□ -0.06
COL11A1-207ENST00000465209 CLEC4GQ6UXB4 293 aa14.67□□□□□ -0.06
COL11A1-207ENST00000465209 MCM10Q7L590 875 aa14.67□□□□□ -0.06
COL11A1-207ENST00000465209 NBPF15Q8N660 670 aa14.67□□□□□ -0.06
COL11A1-207ENST00000465209 CNKSR1Q969H4 720 aa14.67□□□□□ -0.06
COL11A1-207ENST00000465209 MASTLQ96GX5 879 aa14.67□□□□□ -0.06
COL11A1-207ENST00000465209 RGL2O15211 777 aa14.66□□□□□ -0.06
COL11A1-207ENST00000465209 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
COL11A1-207ENST00000465209 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
COL11A1-207ENST00000465209 PPP2R1AP30153 589 aa14.66□□□□□ -0.06
COL11A1-207ENST00000465209 ST5P78524 1137 aa14.66□□□□□ -0.06
COL11A1-207ENST00000465209 SNRPA1P09661 255 aaKnown RBP14.65□□□□□ -0.06
COL11A1-207ENST00000465209 DCTN1Q14203 1278 aa14.65□□□□□ -0.06
COL11A1-207ENST00000465209 DPY19L2Q6NUT2 758 aa14.65□□□□□ -0.06
COL11A1-207ENST00000465209 CFAP53Q96M91 514 aa14.65□□□□□ -0.06
COL11A1-207ENST00000465209 DDNO94850 711 aaPredicted RBP14.64□□□□□ -0.07
COL11A1-207ENST00000465209 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
COL11A1-207ENST00000465209 HTATSF1O43719 755 aaKnown RBP14.63□□□□□ -0.07
COL11A1-207ENST00000465209 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
COL11A1-207ENST00000465209 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL11A1-207ENST00000465209 SOGA3Q5TF21 947 aa14.63□□□□□ -0.07
COL11A1-207ENST00000465209 NBPF5PQ86XG9 351 aaPredicted RBP14.63□□□□□ -0.07
COL11A1-207ENST00000465209 COL4A5P29400 1685 aa14.62□□□□□ -0.07
COL11A1-207ENST00000465209 HSPA1AP0DMV8 641 aaKnown RBP14.62□□□□□ -0.07
COL11A1-207ENST00000465209 HSPA1BP0DMV9 641 aaKnown RBP14.62□□□□□ -0.07
COL11A1-207ENST00000465209 NPR1P16066 1061 aa14.62□□□□□ -0.07
COL11A1-207ENST00000465209 OLFM4Q6UX06 510 aa14.62□□□□□ -0.07
COL11A1-207ENST00000465209 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
COL11A1-207ENST00000465209 ZNF652Q9Y2D9 606 aa14.62□□□□□ -0.07
COL11A1-207ENST00000465209 PASKQ96RG2 1323 aa14.62□□□□□ -0.07
COL11A1-207ENST00000465209 ABCC12Q96J65 1359 aa14.61□□□□□ -0.07
COL11A1-207ENST00000465209 HLFQ16534 295 aa14.61□□□□□ -0.07
COL11A1-207ENST00000465209 CCDC93Q567U6 631 aa14.61□□□□□ -0.07
COL11A1-207ENST00000465209 CHADLQ6NUI6 762 aa14.61□□□□□ -0.07
COL11A1-207ENST00000465209 NPM2Q86SE8 214 aaKnown RBP14.61□□□□□ -0.07
COL11A1-207ENST00000465209 RTF1Q92541 710 aaKnown RBP14.61□□□□□ -0.07
COL11A1-207ENST00000465209 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
COL11A1-207ENST00000465209 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL11A1-207ENST00000465209 ZNF541Q9H0D2 1346 aa14.61□□□□□ -0.07
COL11A1-207ENST00000465209 LTBP1Q14766 1721 aa14.61□□□□□ -0.07
COL11A1-207ENST00000465209 RIC1Q4ADV7 1423 aa14.6□□□□□ -0.07
COL11A1-207ENST00000465209 NPHP1O15259 732 aa14.6□□□□□ -0.07
COL11A1-207ENST00000465209 FKBP4Q02790 459 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL11A1-207ENST00000465209 TAF7Q15545 349 aaPredicted RBP14.59□□□□□ -0.07
COL11A1-207ENST00000465209 CRY2Q49AN0 593 aa14.59□□□□□ -0.07
COL11A1-207ENST00000465209 TAF1DQ9H5J8 278 aaPredicted RBP14.59□□□□□ -0.07
COL11A1-207ENST00000465209 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.08
COL11A1-207ENST00000465209 PLEKHF1Q96S99 279 aa14.58□□□□□ -0.08
COL11A1-207ENST00000465209 ZNF277Q9NRM2 450 aaPredicted RBP14.58□□□□□ -0.08
COL11A1-207ENST00000465209 MIS18AQ9NYP9 233 aa14.58□□□□□ -0.08
COL11A1-207ENST00000465209 CNTNAP1P78357 1384 aa14.58□□□□□ -0.08
COL11A1-207ENST00000465209 IBTKQ9P2D0 1353 aaPredicted RBP14.58□□□□□ -0.08
COL11A1-207ENST00000465209 IQCA1LA6NCM1 817 aa14.57□□□□□ -0.08
COL11A1-207ENST00000465209 LDHDQ86WU2 507 aa14.57□□□□□ -0.08
COL11A1-207ENST00000465209 UBN2Q6ZU65 1347 aa14.57□□□□□ -0.08
COL11A1-207ENST00000465209 FZD9O00144 591 aa14.56□□□□□ -0.08
COL11A1-207ENST00000465209 ITGBL1O95965 494 aaPredicted RBP14.56□□□□□ -0.08
COL11A1-207ENST00000465209 SLC51AQ86UW1 340 aa14.56□□□□□ -0.08
COL11A1-207ENST00000465209 TNS4Q8IZW8 715 aa14.56□□□□□ -0.08
COL11A1-207ENST00000465209 LAMB2P55268 1798 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 ANKRD36CQ5JPF3 1778 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 FAM177BA6PVY3 158 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 IARSP41252 1262 aaKnown RBP14.55□□□□□ -0.08
COL11A1-207ENST00000465209 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
COL11A1-207ENST00000465209 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 RTKN2Q8IZC4 609 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 PSMD1Q99460 953 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 MKRN1Q9UHC7 482 aaKnown RBP14.55□□□□□ -0.08
COL11A1-207ENST00000465209 MAP3K15Q6ZN16 1313 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 THSD7BQ9C0I4 1608 aa14.55□□□□□ -0.08
COL11A1-207ENST00000465209 LRP10Q7Z4F1 713 aa14.54□□□□□ -0.08
COL11A1-207ENST00000465209 NUTM1Q86Y26 1132 aa14.54□□□□□ -0.08
COL11A1-207ENST00000465209 THUMPD2Q9BTF0 503 aaKnown RBP14.54□□□□□ -0.08
COL11A1-207ENST00000465209 RNF123Q5XPI4 1314 aa14.53□□□□□ -0.08
COL11A1-207ENST00000465209 ALDH1B1P30837 517 aa14.53□□□□□ -0.08
COL11A1-207ENST00000465209 HOXA10P31260 410 aaPredicted RBP14.53□□□□□ -0.08
COL11A1-207ENST00000465209 SYNE4Q8N205 404 aa14.53□□□□□ -0.08
COL11A1-207ENST00000465209 NTSR2O95665 410 aa14.52□□□□□ -0.09
COL11A1-207ENST00000465209 EPHX2P34913 555 aa14.52□□□□□ -0.09
COL11A1-207ENST00000465209 NFE2L2Q16236 605 aa14.52□□□□□ -0.09
COL11A1-207ENST00000465209 ZNF34Q8IZ26 560 aa14.52□□□□□ -0.09
COL11A1-207ENST00000465209 PNISRQ8TF01 805 aaKnown RBP14.52□□□□□ -0.09
COL11A1-207ENST00000465209 NYXQ9GZU5 481 aa14.52□□□□□ -0.09
COL11A1-207ENST00000465209 HACL1Q9UJ83 578 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms