RNA–Protein interactions for RNA: ENST00000465176.5

PCCB-205, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-205ENST00000465176 LTBP1Q14766 1721 aa13.47□□□□□ -0.25
PCCB-205ENST00000465176 RNMTO43148 476 aaKnown RBP13.47□□□□□ -0.25
PCCB-205ENST00000465176 MAP1SQ66K74 1059 aaPredicted RBP13.47□□□□□ -0.25
PCCB-205ENST00000465176 PNMA8AQ86V59 439 aaPredicted RBP13.47□□□□□ -0.25
PCCB-205ENST00000465176 ABT1Q9ULW3 272 aaKnown RBP13.47□□□□□ -0.25
PCCB-205ENST00000465176 CLEC11AQ9Y240 323 aa13.47□□□□□ -0.25
PCCB-205ENST00000465176 BCORQ6W2J9 1755 aa13.46□□□□□ -0.25
PCCB-205ENST00000465176 CCDC93Q567U6 631 aa13.46□□□□□ -0.25
PCCB-205ENST00000465176 CNBD1Q8NA66 436 aa13.46□□□□□ -0.25
PCCB-205ENST00000465176 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.25
PCCB-205ENST00000465176 MASTLQ96GX5 879 aa13.46□□□□□ -0.25
PCCB-205ENST00000465176 RNF123Q5XPI4 1314 aa13.45□□□□□ -0.26
PCCB-205ENST00000465176 STARD3NLO95772 234 aa13.45□□□□□ -0.26
PCCB-205ENST00000465176 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCCB-205ENST00000465176 CAPNS2Q96L46 248 aa13.45□□□□□ -0.26
PCCB-205ENST00000465176 PDE4DIPQ5VU43 2346 aa13.44□□□□□ -0.26
PCCB-205ENST00000465176 ECE1P42892 770 aa13.44□□□□□ -0.26
PCCB-205ENST00000465176 ST5P78524 1137 aa13.44□□□□□ -0.26
PCCB-205ENST00000465176 BEGAINQ9BUH8 593 aa13.44□□□□□ -0.26
PCCB-205ENST00000465176 DDX21Q9NR30 783 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCCB-205ENST00000465176 ZNF277Q9NRM2 450 aaPredicted RBP13.44□□□□□ -0.26
PCCB-205ENST00000465176 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
PCCB-205ENST00000465176 IL13P35225 146 aa13.43□□□□□ -0.26
PCCB-205ENST00000465176 SETDB2Q96T68 719 aa13.43□□□□□ -0.26
PCCB-205ENST00000465176 TBC1D2BQ9UPU7 963 aa13.43□□□□□ -0.26
PCCB-205ENST00000465176 FZD9O00144 591 aa13.42□□□□□ -0.26
PCCB-205ENST00000465176 NPHP1O15259 732 aa13.42□□□□□ -0.26
PCCB-205ENST00000465176 CAMTA2O94983 1202 aa13.41□□□□□ -0.26
PCCB-205ENST00000465176 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
PCCB-205ENST00000465176 CYP4F22Q6NT55 531 aa13.41□□□□□ -0.26
PCCB-205ENST00000465176 PAXIP1Q6ZW49 1069 aaPredicted RBP13.41□□□□□ -0.26
PCCB-205ENST00000465176 GPC2Q8N158 579 aa13.41□□□□□ -0.26
PCCB-205ENST00000465176 GPR101Q96P66 508 aaPredicted RBP13.41□□□□□ -0.26
PCCB-205ENST00000465176 MCOLN1Q9GZU1 580 aa13.41□□□□□ -0.26
PCCB-205ENST00000465176 TSKSQ9UJT2 592 aa13.41□□□□□ -0.26
PCCB-205ENST00000465176 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
PCCB-205ENST00000465176 HEG1Q9ULI3 1381 aa13.41□□□□□ -0.26
PCCB-205ENST00000465176 NPR1P16066 1061 aa13.4□□□□□ -0.26
PCCB-205ENST00000465176 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
PCCB-205ENST00000465176 RTKN2Q8IZC4 609 aa13.4□□□□□ -0.26
PCCB-205ENST00000465176 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
PCCB-205ENST00000465176 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
PCCB-205ENST00000465176 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
PCCB-205ENST00000465176 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
PCCB-205ENST00000465176 CA12O43570 354 aa13.39□□□□□ -0.27
PCCB-205ENST00000465176 MAP2K2P36507 400 aa13.39□□□□□ -0.27
PCCB-205ENST00000465176 FMR1Q06787 632 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCCB-205ENST00000465176 GRM1Q13255 1194 aa13.39□□□□□ -0.27
PCCB-205ENST00000465176 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
PCCB-205ENST00000465176 ZNF496Q96IT1 587 aaPredicted RBP13.39□□□□□ -0.27
PCCB-205ENST00000465176 TLL2Q9Y6L7 1015 aa13.39□□□□□ -0.27
PCCB-205ENST00000465176 CASP8AP2Q9UKL3 1982 aa13.39□□□□□ -0.27
PCCB-205ENST00000465176 COL4A5P29400 1685 aa13.38□□□□□ -0.27
PCCB-205ENST00000465176 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
PCCB-205ENST00000465176 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
PCCB-205ENST00000465176 CST9Q5W186 159 aa13.38□□□□□ -0.27
PCCB-205ENST00000465176 MORC1Q86VD1 984 aa13.38□□□□□ -0.27
PCCB-205ENST00000465176 TEX13AQ9BXU3 409 aaPredicted RBP13.38□□□□□ -0.27
PCCB-205ENST00000465176 AOC2O75106 756 aa13.37□□□□□ -0.27
PCCB-205ENST00000465176 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
PCCB-205ENST00000465176 POLR3GLQ9BT43 218 aa13.37□□□□□ -0.27
PCCB-205ENST00000465176 TRAF5O00463 557 aa13.36□□□□□ -0.27
PCCB-205ENST00000465176 A1BGP04217 495 aa13.36□□□□□ -0.27
PCCB-205ENST00000465176 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
PCCB-205ENST00000465176 SCNN1DP51172 638 aa13.36□□□□□ -0.27
PCCB-205ENST00000465176 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
PCCB-205ENST00000465176 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
PCCB-205ENST00000465176 SYNE4Q8N205 404 aa13.36□□□□□ -0.27
PCCB-205ENST00000465176 PANK3Q9H999 370 aa13.36□□□□□ -0.27
PCCB-205ENST00000465176 HMOX1P09601 288 aa13.35□□□□□ -0.27
PCCB-205ENST00000465176 BRPF1P55201 1214 aaPredicted RBP13.35□□□□□ -0.27
PCCB-205ENST00000465176 DGKZQ13574 1117 aa13.35□□□□□ -0.27
PCCB-205ENST00000465176 NPM2Q86SE8 214 aaKnown RBP13.35□□□□□ -0.27
PCCB-205ENST00000465176 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
PCCB-205ENST00000465176 PSMD1Q99460 953 aa13.35□□□□□ -0.27
PCCB-205ENST00000465176 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
PCCB-205ENST00000465176 EPS15P42566 896 aa13.34□□□□□ -0.27
PCCB-205ENST00000465176 EIF6P56537 245 aaKnown RBP13.34□□□□□ -0.27
PCCB-205ENST00000465176 CLEC4GQ6UXB4 293 aa13.34□□□□□ -0.27
PCCB-205ENST00000465176 USP50Q70EL3 339 aaPredicted RBP13.34□□□□□ -0.27
PCCB-205ENST00000465176 SAPCD2Q86UD0 394 aa13.34□□□□□ -0.27
PCCB-205ENST00000465176 HHIPL1Q96JK4 782 aa13.33□□□□□ -0.28
PCCB-205ENST00000465176 FMNL2Q96PY5 1086 aa13.33□□□□□ -0.28
PCCB-205ENST00000465176 ALDH1B1P30837 517 aa13.32□□□□□ -0.28
PCCB-205ENST00000465176 TEFQ10587 303 aa13.32□□□□□ -0.28
PCCB-205ENST00000465176 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
PCCB-205ENST00000465176 RGL2O15211 777 aa13.31□□□□□ -0.28
PCCB-205ENST00000465176 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
PCCB-205ENST00000465176 IL17REQ8NFR9 667 aa13.31□□□□□ -0.28
PCCB-205ENST00000465176 CELF2O95319 508 aaKnown RBP13.3□□□□□ -0.28
PCCB-205ENST00000465176 PRPF38BQ5VTL8 546 aaKnown RBP13.3□□□□□ -0.28
PCCB-205ENST00000465176 CC2D2BQ6DHV5 1058 aa13.3□□□□□ -0.28
PCCB-205ENST00000465176 CIAPIN1Q6FI81 312 aa13.3□□□□□ -0.28
PCCB-205ENST00000465176 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
PCCB-205ENST00000465176 PIP4K2AP48426 406 aaPredicted RBP13.29□□□□□ -0.28
PCCB-205ENST00000465176 CRY2Q49AN0 593 aa13.29□□□□□ -0.28
PCCB-205ENST00000465176 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
PCCB-205ENST00000465176 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
PCCB-205ENST00000465176 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
PCCB-205ENST00000465176 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms