RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 PRPF40BQ6NWY9 871 aaKnown RBP19.66■□□□□ 0.74
MCF2L-220ENST00000464800 CEMIPQ8WUJ3 1361 aa19.66■□□□□ 0.74
MCF2L-220ENST00000464800 SCN4AP35499 1836 aa19.65■□□□□ 0.74
MCF2L-220ENST00000464800 A1BGP04217 495 aa19.65■□□□□ 0.74
MCF2L-220ENST00000464800 CHADLQ6NUI6 762 aa19.65■□□□□ 0.74
MCF2L-220ENST00000464800 NPC1L1Q9UHC9 1359 aa19.65■□□□□ 0.74
MCF2L-220ENST00000464800 DZIP3Q86Y13 1208 aaKnown RBP19.64■□□□□ 0.73
MCF2L-220ENST00000464800 SRGNP10124 158 aa19.63■□□□□ 0.73
MCF2L-220ENST00000464800 MASTLQ96GX5 879 aa19.63■□□□□ 0.73
MCF2L-220ENST00000464800 CREBZFQ9NS37 354 aa19.63■□□□□ 0.73
MCF2L-220ENST00000464800 BTBD11A6QL63 1104 aa19.62■□□□□ 0.73
MCF2L-220ENST00000464800 DDNO94850 711 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-220ENST00000464800 CNGB1Q14028 1251 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-220ENST00000464800 IQCA1LA6NCM1 817 aa19.6■□□□□ 0.73
MCF2L-220ENST00000464800 KCNQ3O43525 872 aa19.6■□□□□ 0.73
MCF2L-220ENST00000464800 POTEIP0CG38 1075 aa19.6■□□□□ 0.73
MCF2L-220ENST00000464800 POTEJP0CG39 1038 aa19.6■□□□□ 0.73
MCF2L-220ENST00000464800 NBPF5PQ86XG9 351 aaPredicted RBP19.6■□□□□ 0.73
MCF2L-220ENST00000464800 MKRN1Q9UHC7 482 aaKnown RBP19.6■□□□□ 0.73
MCF2L-220ENST00000464800 ZNF652Q9Y2D9 606 aa19.6■□□□□ 0.73
MCF2L-220ENST00000464800 PRKAR2BP31323 418 aa19.59■□□□□ 0.73
MCF2L-220ENST00000464800 CCDC93Q567U6 631 aa19.59■□□□□ 0.73
MCF2L-220ENST00000464800 LAMB4A4D0S4 1761 aa19.58■□□□□ 0.73
MCF2L-220ENST00000464800 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.72
MCF2L-220ENST00000464800 CLEC4GQ6UXB4 293 aa19.58■□□□□ 0.72
MCF2L-220ENST00000464800 LDHDQ86WU2 507 aa19.58■□□□□ 0.72
MCF2L-220ENST00000464800 L3MBTL3Q96JM7 780 aaPredicted RBP19.58■□□□□ 0.72
MCF2L-220ENST00000464800 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.72
MCF2L-220ENST00000464800 USP16Q9Y5T5 823 aa19.58■□□□□ 0.72
MCF2L-220ENST00000464800 NPR1P16066 1061 aa19.57■□□□□ 0.72
MCF2L-220ENST00000464800 CFAP53Q96M91 514 aa19.57■□□□□ 0.72
MCF2L-220ENST00000464800 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
MCF2L-220ENST00000464800 CNTNAP1P78357 1384 aa19.57■□□□□ 0.72
MCF2L-220ENST00000464800 SNRPA1P09661 255 aaKnown RBP19.56■□□□□ 0.72
MCF2L-220ENST00000464800 PASKQ96RG2 1323 aa19.55■□□□□ 0.72
MCF2L-220ENST00000464800 ADAMTSL1Q8N6G6 1762 aa19.55■□□□□ 0.72
MCF2L-220ENST00000464800 PRAMEF22A3QJZ6 481 aa19.55■□□□□ 0.72
MCF2L-220ENST00000464800 FKBP4Q02790 459 aaKnown RBP eCLIP19.55■□□□□ 0.721e-7■■■■■ 33.2
MCF2L-220ENST00000464800 C7orf43Q8WVR3 580 aa19.55■□□□□ 0.72
MCF2L-220ENST00000464800 RTF1Q92541 710 aaKnown RBP19.55■□□□□ 0.72
MCF2L-220ENST00000464800 TAF1DQ9H5J8 278 aaPredicted RBP19.55■□□□□ 0.72
MCF2L-220ENST00000464800 NIP7Q9Y221 180 aaKnown RBP eCLIP19.54■□□□□ 0.72
MCF2L-220ENST00000464800 ZNF541Q9H0D2 1346 aa19.53■□□□□ 0.72
MCF2L-220ENST00000464800 KLRG2A4D1S0 409 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-220ENST00000464800 RGL2O15211 777 aa19.53■□□□□ 0.72
MCF2L-220ENST00000464800 TPTE2Q6XPS3 522 aa19.53■□□□□ 0.72
MCF2L-220ENST00000464800 MCM10Q7L590 875 aa19.53■□□□□ 0.72
MCF2L-220ENST00000464800 ZNF277Q9NRM2 450 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-220ENST00000464800 NUDCQ9Y266 331 aa19.53■□□□□ 0.72
MCF2L-220ENST00000464800 EAPPQ56P03 285 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-220ENST00000464800 RTKN2Q8IZC4 609 aa19.52■□□□□ 0.72
MCF2L-220ENST00000464800 HACL1Q9UJ83 578 aa19.51■□□□□ 0.71
MCF2L-220ENST00000464800 TMEM88BA6NKF7 163 aa19.5■□□□□ 0.71
MCF2L-220ENST00000464800 FAM177BA6PVY3 158 aa19.5■□□□□ 0.71
MCF2L-220ENST00000464800 NBPF26B4DH59 902 aa19.5■□□□□ 0.71
MCF2L-220ENST00000464800 FOXN1O15353 648 aa19.5■□□□□ 0.71
MCF2L-220ENST00000464800 U2AF1L5P0DN76 240 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-220ENST00000464800 U2AF1Q01081 240 aaKnown RBP eCLIP19.5■□□□□ 0.71
MCF2L-220ENST00000464800 NBPF10Q6P3W6 841 aaKnown RBP19.5■□□□□ 0.71
MCF2L-220ENST00000464800 OLFM4Q6UX06 510 aa19.5■□□□□ 0.71
MCF2L-220ENST00000464800 NBPF15Q8N660 670 aa19.5■□□□□ 0.71
MCF2L-220ENST00000464800 NUP98P52948 1817 aa19.5■□□□□ 0.71
MCF2L-220ENST00000464800 EPHX2P34913 555 aa19.49■□□□□ 0.71
MCF2L-220ENST00000464800 IARSP41252 1262 aaKnown RBP19.49■□□□□ 0.71
MCF2L-220ENST00000464800 AIDAQ96BJ3 306 aa19.49■□□□□ 0.71
MCF2L-220ENST00000464800 CLEC11AQ9Y240 323 aa19.49■□□□□ 0.71
MCF2L-220ENST00000464800 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
MCF2L-220ENST00000464800 ITGBL1O95965 494 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-220ENST00000464800 GTF2E1P29083 439 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-220ENST00000464800 ALDH1B1P30837 517 aa19.48■□□□□ 0.71
MCF2L-220ENST00000464800 DLG5Q8TDM6 1919 aa19.48■□□□□ 0.71
MCF2L-220ENST00000464800 RNF123Q5XPI4 1314 aa19.48■□□□□ 0.71
MCF2L-220ENST00000464800 HTATSF1O43719 755 aaKnown RBP19.47■□□□□ 0.71
MCF2L-220ENST00000464800 VEGFBP49765 207 aa19.47■□□□□ 0.71
MCF2L-220ENST00000464800 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
MCF2L-220ENST00000464800 PNMA8AQ86V59 439 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-220ENST00000464800 PRDM10Q9NQV6 1147 aa19.47■□□□□ 0.71
MCF2L-220ENST00000464800 SNED1Q8TER0 1413 aa19.46■□□□□ 0.71
MCF2L-220ENST00000464800 FZD9O00144 591 aa19.46■□□□□ 0.71
MCF2L-220ENST00000464800 CTCFP49711 727 aaPredicted RBP19.46■□□□□ 0.71
MCF2L-220ENST00000464800 HLFQ16534 295 aa19.46■□□□□ 0.71
MCF2L-220ENST00000464800 SYNE4Q8N205 404 aa19.46■□□□□ 0.71
MCF2L-220ENST00000464800 ABCC12Q96J65 1359 aa19.45■□□□□ 0.7
MCF2L-220ENST00000464800 GPC2Q8N158 579 aa19.45■□□□□ 0.7
MCF2L-220ENST00000464800 NYXQ9GZU5 481 aa19.45■□□□□ 0.7
MCF2L-220ENST00000464800 PPP2R1AP30153 589 aa19.44■□□□□ 0.7
MCF2L-220ENST00000464800 TAF7Q15545 349 aaPredicted RBP19.44■□□□□ 0.7
MCF2L-220ENST00000464800 JDP2Q8WYK2 163 aa19.44■□□□□ 0.7
MCF2L-220ENST00000464800 PSMD1Q99460 953 aa19.44■□□□□ 0.7
MCF2L-220ENST00000464800 LTBP1Q14766 1721 aa19.43■□□□□ 0.7
MCF2L-220ENST00000464800 CRY2Q49AN0 593 aa19.43■□□□□ 0.7
MCF2L-220ENST00000464800 MAP1SQ66K74 1059 aaPredicted RBP19.43■□□□□ 0.7
MCF2L-220ENST00000464800 CNTROBQ8N137 903 aa19.43■□□□□ 0.7
MCF2L-220ENST00000464800 COL4A5P29400 1685 aa19.43■□□□□ 0.7
MCF2L-220ENST00000464800 RIC1Q4ADV7 1423 aa19.42■□□□□ 0.7
MCF2L-220ENST00000464800 RASSF10A6NK89 507 aa19.42■□□□□ 0.7
MCF2L-220ENST00000464800 THSD7BQ9C0I4 1608 aa19.42■□□□□ 0.7
MCF2L-220ENST00000464800 IBTKQ9P2D0 1353 aaPredicted RBP19.42■□□□□ 0.7
MCF2L-220ENST00000464800 ERVV-1B6SEH8 477 aa19.41■□□□□ 0.7
MCF2L-220ENST00000464800 EIF6P56537 245 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms