RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 SSFA2P28290 1259 aa7.67□□□□□ -1.18
CLK1-208ENST00000464454 MYO19Q96H55 970 aa7.67□□□□□ -1.18
CLK1-208ENST00000464454 SLAIN2Q9P270 581 aa7.67□□□□□ -1.18
CLK1-208ENST00000464454 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
CLK1-208ENST00000464454 GTPBP3Q969Y2 492 aaKnown RBP7.66□□□□□ -1.18
CLK1-208ENST00000464454 MKNK1Q9BUB5 465 aa7.66□□□□□ -1.18
CLK1-208ENST00000464454 CFHR5Q9BXR6 569 aa7.66□□□□□ -1.18
CLK1-208ENST00000464454 QTRT2Q9H974 415 aaKnown RBP7.66□□□□□ -1.18
CLK1-208ENST00000464454 PCDHGC4Q9Y5F7 938 aa7.66□□□□□ -1.18
CLK1-208ENST00000464454 ATXN7O15265 892 aaPredicted RBP7.65□□□□□ -1.18
CLK1-208ENST00000464454 ERBB4Q15303 1308 aa7.65□□□□□ -1.18
CLK1-208ENST00000464454 C16orf46Q6P387 395 aa7.65□□□□□ -1.18
CLK1-208ENST00000464454 LRRC69Q6ZNQ3 347 aa7.65□□□□□ -1.18
CLK1-208ENST00000464454 ZSCAN1Q8NBB4 408 aa7.65□□□□□ -1.18
CLK1-208ENST00000464454 C7orf43Q8WVR3 580 aa7.65□□□□□ -1.18
CLK1-208ENST00000464454 ATXN7L1Q9ULK2 861 aaPredicted RBP7.65□□□□□ -1.18
CLK1-208ENST00000464454 THBS1P07996 1170 aa7.64□□□□□ -1.19
CLK1-208ENST00000464454 FAM157BP0CG42 384 aa7.64□□□□□ -1.19
CLK1-208ENST00000464454 IER5Q5VY09 327 aa7.64□□□□□ -1.19
CLK1-208ENST00000464454 SUSD3Q96L08 255 aa7.64□□□□□ -1.19
CLK1-208ENST00000464454 ZCCHC2Q9C0B9 1178 aaKnown RBP7.64□□□□□ -1.19
CLK1-208ENST00000464454 CARNS1A5YM72 827 aa7.63□□□□□ -1.19
CLK1-208ENST00000464454 TGFBR3LH3BV60 316 aa7.63□□□□□ -1.19
CLK1-208ENST00000464454 DGKZQ13574 1117 aa7.63□□□□□ -1.19
CLK1-208ENST00000464454 UBAP2LQ14157 1087 aaKnown RBP7.63□□□□□ -1.19
CLK1-208ENST00000464454 C11orf91Q3C1V1 193 aa7.63□□□□□ -1.19
CLK1-208ENST00000464454 NSFL1CQ9UNZ2 370 aaKnown RBP7.63□□□□□ -1.19
CLK1-208ENST00000464454 LAMC2Q13753 1193 aa7.62□□□□□ -1.19
CLK1-208ENST00000464454 GPR161Q8N6U8 529 aaKnown RBP7.62□□□□□ -1.19
CLK1-208ENST00000464454 NDFIP2Q9NV92 336 aa7.62□□□□□ -1.19
CLK1-208ENST00000464454 GPR25O00155 361 aa7.61□□□□□ -1.19
CLK1-208ENST00000464454 KHNYNO15037 678 aaKnown RBP7.61□□□□□ -1.19
CLK1-208ENST00000464454 BRD1O95696 1058 aa7.61□□□□□ -1.19
CLK1-208ENST00000464454 BRD2P25440 801 aaKnown RBP7.61□□□□□ -1.19
CLK1-208ENST00000464454 ARID4AP29374 1257 aaPredicted RBP7.61□□□□□ -1.19
CLK1-208ENST00000464454 NAA30Q147X3 362 aaPredicted RBP7.61□□□□□ -1.19
CLK1-208ENST00000464454 COX20Q5RI15 118 aa7.61□□□□□ -1.19
CLK1-208ENST00000464454 PHLDB3Q6NSJ2 640 aa7.61□□□□□ -1.19
CLK1-208ENST00000464454 HSH2DQ96JZ2 352 aa7.61□□□□□ -1.19
CLK1-208ENST00000464454 COL25A1Q9BXS0 654 aaPredicted RBP7.61□□□□□ -1.19
CLK1-208ENST00000464454 MBIPQ9NS73 344 aa7.61□□□□□ -1.19
CLK1-208ENST00000464454 DCDC2BA2VCK2 349 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 BNIP3LO60238 219 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 PDIA4P13667 645 aaKnown RBP7.6□□□□□ -1.19
CLK1-208ENST00000464454 MX2P20592 715 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 FGFR3P22607 806 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 GMPRP36959 345 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 BTLAQ7Z6A9 289 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 ZNF280CQ8ND82 737 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 ABHD17AQ96GS6 310 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 CEP63Q96MT8 703 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 TRAIPQ9BWF2 469 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 KLK14Q9P0G3 267 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 LRFN2Q9ULH4 789 aa7.6□□□□□ -1.19
CLK1-208ENST00000464454 EFSO43281 561 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 MAPTP10636 758 aaKnown RBP7.59□□□□□ -1.19
CLK1-208ENST00000464454 EPB42P16452 691 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 TNP2Q05952 138 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 TYRO3Q06418 890 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 GAS6Q14393 721 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 FAM182BQ5T319 152 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 CAPN12Q6ZSI9 719 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 ABTB2Q8N961 1025 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 HELQQ8TDG4 1101 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 IFT43Q96FT9 208 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 SEPT3Q9UH03 358 aa7.59□□□□□ -1.19
CLK1-208ENST00000464454 PATL2C9JE40 543 aaKnown RBP7.58□□□□□ -1.2
CLK1-208ENST00000464454 MAP2K3P46734 347 aa7.58□□□□□ -1.2
CLK1-208ENST00000464454 CCER1Q8TC90 406 aaPredicted RBP7.58□□□□□ -1.2
CLK1-208ENST00000464454 SAP130Q9H0E3 1048 aa7.58□□□□□ -1.2
CLK1-208ENST00000464454 BRD7Q9NPI1 651 aa7.58□□□□□ -1.2
CLK1-208ENST00000464454 MARK1Q9P0L2 795 aa7.58□□□□□ -1.2
CLK1-208ENST00000464454 STIM2Q9P246 746 aa7.58□□□□□ -1.2
CLK1-208ENST00000464454 BCS1LQ9Y276 419 aa7.58□□□□□ -1.2
CLK1-208ENST00000464454 ARSDP51689 593 aa7.57□□□□□ -1.2
CLK1-208ENST00000464454 KCNQ4P56696 695 aa7.57□□□□□ -1.2
CLK1-208ENST00000464454 SRSF11Q05519 484 aaKnown RBP7.57□□□□□ -1.2
CLK1-208ENST00000464454 RNFT1Q5M7Z0 435 aa7.57□□□□□ -1.2
CLK1-208ENST00000464454 GTF3C2Q8WUA4 911 aaPredicted RBP7.57□□□□□ -1.2
CLK1-208ENST00000464454 KLRG1Q96E93 195 aa7.57□□□□□ -1.2
CLK1-208ENST00000464454 CNTNAP3BQ96NU0 1288 aa7.57□□□□□ -1.2
CLK1-208ENST00000464454 CNTNAP3Q9BZ76 1288 aa7.57□□□□□ -1.2
CLK1-208ENST00000464454 FAM13BQ9NYF5 915 aa7.57□□□□□ -1.2
CLK1-208ENST00000464454 EGFL7Q9UHF1 273 aa7.57□□□□□ -1.2
CLK1-208ENST00000464454 TNFRSF10BO14763 440 aa7.56□□□□□ -1.2
CLK1-208ENST00000464454 MICAL2O94851 1124 aa7.56□□□□□ -1.2
CLK1-208ENST00000464454 BMP4P12644 408 aa7.56□□□□□ -1.2
CLK1-208ENST00000464454 IDH3AP50213 366 aa7.56□□□□□ -1.2
CLK1-208ENST00000464454 SF3B2Q13435 895 aaKnown RBP7.56□□□□□ -1.2
CLK1-208ENST00000464454 TREML1Q86YW5 311 aa7.56□□□□□ -1.2
CLK1-208ENST00000464454 DMGDHQ9UI17 866 aaKnown RBP7.56□□□□□ -1.2
CLK1-208ENST00000464454 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
CLK1-208ENST00000464454 CD33P20138 364 aa7.55□□□□□ -1.2
CLK1-208ENST00000464454 SCNN1AP37088 669 aa7.55□□□□□ -1.2
CLK1-208ENST00000464454 KRT76Q01546 638 aa7.55□□□□□ -1.2
CLK1-208ENST00000464454 KCNA1Q09470 495 aa7.55□□□□□ -1.2
CLK1-208ENST00000464454 NEUROD1Q13562 356 aa7.55□□□□□ -1.2
CLK1-208ENST00000464454 C11orf16Q9NQ32 467 aa7.55□□□□□ -1.2
CLK1-208ENST00000464454 ABL1P00519 1130 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms