RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PIP4K2AP48426 406 aaPredicted RBP26.72■■□□□ 1.87
PDLIM2-216ENST00000464275 SUCLG2Q96I99 432 aa26.72■■□□□ 1.87
PDLIM2-216ENST00000464275 TBC1D2Q9BYX2 928 aa26.72■■□□□ 1.87
PDLIM2-216ENST00000464275 GCKRQ14397 625 aa26.71■■□□□ 1.87
PDLIM2-216ENST00000464275 GSE1Q14687 1217 aa26.71■■□□□ 1.87
PDLIM2-216ENST00000464275 PLBD2Q8NHP8 589 aa26.71■■□□□ 1.87
PDLIM2-216ENST00000464275 KAT6BQ8WYB5 2073 aa26.7■■□□□ 1.87
PDLIM2-216ENST00000464275 IL1RAPL2Q9NP60 686 aa26.7■■□□□ 1.86
PDLIM2-216ENST00000464275 NBPF26B4DH59 902 aa26.69■■□□□ 1.86
PDLIM2-216ENST00000464275 NBPF14Q5TI25 921 aa26.69■■□□□ 1.86
PDLIM2-216ENST00000464275 NBPF10Q6P3W6 841 aaKnown RBP26.69■■□□□ 1.86
PDLIM2-216ENST00000464275 AEBP2Q6ZN18 517 aaPredicted RBP26.69■■□□□ 1.86
PDLIM2-216ENST00000464275 NBPF15Q8N660 670 aa26.69■■□□□ 1.86
PDLIM2-216ENST00000464275 KAZALD1Q96I82 304 aa26.69■■□□□ 1.86
PDLIM2-216ENST00000464275 NWD2Q9ULI1 1742 aa26.68■■□□□ 1.86
PDLIM2-216ENST00000464275 PTCD1O75127 700 aaKnown RBP26.67■■□□□ 1.86
PDLIM2-216ENST00000464275 BICC1Q9H694 974 aaKnown RBP26.67■■□□□ 1.86
PDLIM2-216ENST00000464275 ERC1Q8IUD2 1116 aa26.67■■□□□ 1.86
PDLIM2-216ENST00000464275 OS9Q13438 667 aaPredicted RBP26.66■■□□□ 1.86
PDLIM2-216ENST00000464275 COL15A1P39059 1388 aa26.65■■□□□ 1.86
PDLIM2-216ENST00000464275 EXOC5O00471 708 aa26.65■■□□□ 1.86
PDLIM2-216ENST00000464275 TSHZ3Q63HK5 1081 aa26.65■■□□□ 1.86
PDLIM2-216ENST00000464275 TOM1O60784 492 aa26.64■■□□□ 1.86
PDLIM2-216ENST00000464275 NUTM1Q86Y26 1132 aa26.64■■□□□ 1.86
PDLIM2-216ENST00000464275 VSIG10Q8N0Z9 540 aa26.64■■□□□ 1.86
PDLIM2-216ENST00000464275 PIGBQ92521 554 aa26.64■■□□□ 1.86
PDLIM2-216ENST00000464275 A1BGP04217 495 aa26.64■■□□□ 1.85
PDLIM2-216ENST00000464275 SNX21Q969T3 373 aa26.64■■□□□ 1.85
PDLIM2-216ENST00000464275 TEX13AQ9BXU3 409 aaPredicted RBP26.64■■□□□ 1.85
PDLIM2-216ENST00000464275 KIF2CQ99661 725 aa26.63■■□□□ 1.85
PDLIM2-216ENST00000464275 CDCA7Q9BWT1 371 aaPredicted RBP26.63■■□□□ 1.85
PDLIM2-216ENST00000464275 TJP1Q07157 1748 aa26.63■■□□□ 1.85
PDLIM2-216ENST00000464275 DOT1LQ8TEK3 1739 aa26.63■■□□□ 1.85
PDLIM2-216ENST00000464275 HSCBQ8IWL3 235 aa26.62■■□□□ 1.85
PDLIM2-216ENST00000464275 USP26Q9BXU7 913 aa26.62■■□□□ 1.85
PDLIM2-216ENST00000464275 ERC2O15083 957 aa26.62■■□□□ 1.85
PDLIM2-216ENST00000464275 REC8O95072 547 aa26.62■■□□□ 1.85
PDLIM2-216ENST00000464275 CLASRPQ8N2M8 674 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-216ENST00000464275 PA2G4Q9UQ80 394 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-216ENST00000464275 THRAP3Q9Y2W1 955 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-216ENST00000464275 USP42Q9H9J4 1324 aaKnown RBP26.61■■□□□ 1.85
PDLIM2-216ENST00000464275 BCL9O00512 1426 aa26.6■■□□□ 1.85
PDLIM2-216ENST00000464275 TRIM6-TRIM34B2RNG4 842 aa26.6■■□□□ 1.85
PDLIM2-216ENST00000464275 ADAMTS2O95450 1211 aa26.6■■□□□ 1.85
PDLIM2-216ENST00000464275 G3BP1Q13283 466 aaKnown RBP eCLIP26.6■■□□□ 1.85
PDLIM2-216ENST00000464275 TTLL7Q6ZT98 887 aa26.6■■□□□ 1.85
PDLIM2-216ENST00000464275 ATG3Q9NT62 314 aa26.6■■□□□ 1.85
PDLIM2-216ENST00000464275 ASAP1Q9ULH1 1129 aa26.6■■□□□ 1.85
PDLIM2-216ENST00000464275 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.6■■□□□ 1.85
PDLIM2-216ENST00000464275 TTC41PQ6P2S7 1318 aa26.59■■□□□ 1.85
PDLIM2-216ENST00000464275 ATP5J2-PTCD1G3V325 749 aa26.59■■□□□ 1.85
PDLIM2-216ENST00000464275 RILPL2Q969X0 211 aa26.59■■□□□ 1.85
PDLIM2-216ENST00000464275 SPATA31A1Q5TZJ5 1347 aa26.59■■□□□ 1.85
PDLIM2-216ENST00000464275 PI4K2BQ8TCG2 481 aa26.58■■□□□ 1.85
PDLIM2-216ENST00000464275 A0A087WZG4 1122 aa26.58■■□□□ 1.85
PDLIM2-216ENST00000464275 FRAT2O75474 233 aaPredicted RBP26.58■■□□□ 1.85
PDLIM2-216ENST00000464275 EPHA10Q5JZY3 1008 aa26.57■■□□□ 1.84
PDLIM2-216ENST00000464275 UBE3BQ7Z3V4 1068 aa26.57■■□□□ 1.84
PDLIM2-216ENST00000464275 ANTXR1Q9H6X2 564 aa26.57■■□□□ 1.84
PDLIM2-216ENST00000464275 CHMLP26374 656 aa26.56■■□□□ 1.84
PDLIM2-216ENST00000464275 CASP7P55210 303 aa26.56■■□□□ 1.84
PDLIM2-216ENST00000464275 PIP4K2BP78356 416 aa26.56■■□□□ 1.84
PDLIM2-216ENST00000464275 RABL6Q3YEC7 729 aaPredicted RBP26.56■■□□□ 1.84
PDLIM2-216ENST00000464275 ESYT1Q9BSJ8 1104 aa26.55■■□□□ 1.84
PDLIM2-216ENST00000464275 DNAJC10Q8IXB1 793 aa26.55■■□□□ 1.84
PDLIM2-216ENST00000464275 SLKQ9H2G2 1235 aaPredicted RBP26.55■■□□□ 1.84
PDLIM2-216ENST00000464275 CWC25Q9NXE8 425 aaPredicted RBP26.55■■□□□ 1.84
PDLIM2-216ENST00000464275 H7C1W4 665 aa26.54■■□□□ 1.84
PDLIM2-216ENST00000464275 STARD3NLO95772 234 aa26.54■■□□□ 1.84
PDLIM2-216ENST00000464275 GPATCH3Q96I76 525 aa26.54■■□□□ 1.84
PDLIM2-216ENST00000464275 RBM42Q9BTD8 480 aaKnown RBP26.54■■□□□ 1.84
PDLIM2-216ENST00000464275 SLIT2O94813 1529 aa26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 NUTM2BA6NNL0 878 aaPredicted RBP26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 NUTM2EB1AL46 878 aaPredicted RBP26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 GLRX3O76003 335 aaKnown RBP26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 SASH1O94885 1247 aa26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 UNC5CLQ8IV45 518 aa26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 NUTM2AQ8IVF1 878 aaPredicted RBP26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 COPRSQ9NQ92 184 aa26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 IFIT2P09913 472 aaKnown RBP26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 RABEP1Q15276 862 aa26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 CCDC191Q8NCU4 936 aa26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 JARID2Q92833 1246 aaPredicted RBP26.53■■□□□ 1.84
PDLIM2-216ENST00000464275 CNTROBQ8N137 903 aa26.52■■□□□ 1.84
PDLIM2-216ENST00000464275 ZBTB3Q9H5J0 574 aa26.52■■□□□ 1.84
PDLIM2-216ENST00000464275 ANKRD36CQ5JPF3 1778 aa26.52■■□□□ 1.84
PDLIM2-216ENST00000464275 ECHDC1Q9NTX5 307 aa26.51■■□□□ 1.83
PDLIM2-216ENST00000464275 RFX5P48382 616 aaPredicted RBP26.51■■□□□ 1.83
PDLIM2-216ENST00000464275 DDB1Q16531 1140 aa26.51■■□□□ 1.83
PDLIM2-216ENST00000464275 SPATA31A5Q5VU36 1347 aa26.51■■□□□ 1.83
PDLIM2-216ENST00000464275 SPATA31A7Q8IWB4 1347 aa26.51■■□□□ 1.83
PDLIM2-216ENST00000464275 AACSQ86V21 672 aa26.5■■□□□ 1.83
PDLIM2-216ENST00000464275 SIL1Q9H173 461 aa26.49■■□□□ 1.83
PDLIM2-216ENST00000464275 KIF6Q6ZMV9 814 aa26.48■■□□□ 1.83
PDLIM2-216ENST00000464275 PTPN12Q05209 780 aaKnown RBP26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 ISCA1Q9BUE6 129 aa26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 NUP98P52948 1817 aa26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 EPB41L2O43491 1005 aaKnown RBP26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 PRIM1P49642 420 aaKnown RBP26.47■■□□□ 1.83
PDLIM2-216ENST00000464275 FOXO4P98177 505 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms