RNA–Protein interactions for RNA: ENST00000464238.5

C1orf61-209, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 412 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-209	ENST00000464238	COL11A2	P13942	1736 aa	Predicted RBP	11.38	□□□□□ -0.59
C1orf61-209	ENST00000464238	KCNQ3	O43525	872 aa		11.38	□□□□□ -0.59
C1orf61-209	ENST00000464238	GTF2E1	P29083	439 aa	Predicted RBP	11.38	□□□□□ -0.59
C1orf61-209	ENST00000464238	APLP1	P51693	650 aa		11.38	□□□□□ -0.59
C1orf61-209	ENST00000464238	DCTN1	Q14203	1278 aa		11.38	□□□□□ -0.59
C1orf61-209	ENST00000464238	PRR5L	Q6MZQ0	368 aa		11.38	□□□□□ -0.59
C1orf61-209	ENST00000464238	RBM46	Q8TBY0	533 aa	Known RBP	11.38	□□□□□ -0.59
C1orf61-209	ENST00000464238	STYK1	Q6J9G0	422 aa		11.37	□□□□□ -0.59
C1orf61-209	ENST00000464238	DPY19L2	Q6NUT2	758 aa		11.37	□□□□□ -0.59
C1orf61-209	ENST00000464238	KIF6	Q6ZMV9	814 aa		11.37	□□□□□ -0.59
C1orf61-209	ENST00000464238	MASTL	Q96GX5	879 aa		11.37	□□□□□ -0.59
C1orf61-209	ENST00000464238	NYX	Q9GZU5	481 aa		11.37	□□□□□ -0.59
C1orf61-209	ENST00000464238	BABAM1	Q9NWV8	329 aa		11.37	□□□□□ -0.59
C1orf61-209	ENST00000464238	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
C1orf61-209	ENST00000464238	CEP350	Q5VT06	3117 aa		11.37	□□□□□ -0.59
C1orf61-209	ENST00000464238	ERBB4	Q15303	1308 aa		11.36	□□□□□ -0.59
C1orf61-209	ENST00000464238	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.36	□□□□□ -0.59
C1orf61-209	ENST00000464238	FSTL1	Q12841	308 aa		11.36	□□□□□ -0.59
C1orf61-209	ENST00000464238	WDR43	Q15061	677 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
C1orf61-209	ENST00000464238	PLEKHF1	Q96S99	279 aa		11.36	□□□□□ -0.59
C1orf61-209	ENST00000464238	SLX4	Q8IY92	1834 aa		11.36	□□□□□ -0.59
C1orf61-209	ENST00000464238	ERVV-1	B6SEH8	477 aa		11.35	□□□□□ -0.59
C1orf61-209	ENST00000464238	TAOK3	Q9H2K8	898 aa		11.35	□□□□□ -0.59
C1orf61-209	ENST00000464238	NMRK2	Q9NPI5	230 aa		11.35	□□□□□ -0.59
C1orf61-209	ENST00000464238	TSPYL4	Q9UJ04	414 aa		11.35	□□□□□ -0.59
C1orf61-209	ENST00000464238	WDR90	Q96KV7	1748 aa		11.35	□□□□□ -0.59
C1orf61-209	ENST00000464238	LTBP3	Q9NS15	1303 aa		11.35	□□□□□ -0.59
C1orf61-209	ENST00000464238	GLTPD2	A6NH11	291 aa		11.34	□□□□□ -0.59
C1orf61-209	ENST00000464238	SRGN	P10124	158 aa		11.34	□□□□□ -0.59
C1orf61-209	ENST00000464238	VEGFA	P15692	232 aa	Predicted RBP	11.34	□□□□□ -0.59
C1orf61-209	ENST00000464238	NPR1	P16066	1061 aa		11.34	□□□□□ -0.59
C1orf61-209	ENST00000464238	ALDH1B1	P30837	517 aa		11.34	□□□□□ -0.59
C1orf61-209	ENST00000464238	RIPK4	P57078	832 aa		11.34	□□□□□ -0.59
C1orf61-209	ENST00000464238	RASSF7	Q02833	373 aa		11.34	□□□□□ -0.59
C1orf61-209	ENST00000464238	PRAMEF22	A3QJZ6	481 aa		11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	C21orf2	O43822	256 aa		11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	PIP4K2A	P48426	406 aa	Predicted RBP	11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	EIF4A1	P60842	406 aa	Known RBP	11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	DDX10	Q13206	875 aa	Known RBP	11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	CCDC93	Q567U6	631 aa		11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	PRPF40B	Q6NWY9	871 aa	Known RBP	11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	SMC1B	Q8NDV3	1235 aa		11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	MIS18A	Q9NYP9	233 aa		11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	MAP3K15	Q6ZN16	1313 aa		11.33	□□□□□ -0.6
C1orf61-209	ENST00000464238	SCN4A	P35499	1836 aa		11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	ANKRD36C	Q5JPF3	1778 aa		11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	NBPF26	B4DH59	902 aa		11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	ERFE	Q4G0M1	354 aa		11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	GRIPAP1	Q4V328	841 aa		11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	NBPF10	Q6P3W6	841 aa	Known RBP	11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	RTKN2	Q8IZC4	609 aa		11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	NBPF15	Q8N660	670 aa		11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	TMX4	Q9H1E5	349 aa	Predicted RBP	11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	RRAGC	Q9HB90	399 aa		11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	RRP7A	Q9Y3A4	280 aa	Known RBP	11.32	□□□□□ -0.6
C1orf61-209	ENST00000464238	NFKBIE	O00221	500 aa		11.31	□□□□□ -0.6
C1orf61-209	ENST00000464238	PPP1R42	Q7Z4L9	355 aa		11.31	□□□□□ -0.6
C1orf61-209	ENST00000464238	CCDC24	Q8N4L8	307 aa		11.31	□□□□□ -0.6
C1orf61-209	ENST00000464238	NGEF	Q8N5V2	710 aa		11.31	□□□□□ -0.6
C1orf61-209	ENST00000464238	RIC1	Q4ADV7	1423 aa		11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	KLRG2	A4D1S0	409 aa	Predicted RBP	11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	FAM177B	A6PVY3	158 aa		11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	MYL6B	P14649	208 aa		11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	TMPO	P42166	694 aa	Known RBP	11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	PARP10	Q53GL7	1025 aa		11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	HSP90AB3P	Q58FF7	597 aa		11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	CC2D2B	Q6DHV5	1058 aa		11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	RPGR	Q92834	1020 aa	Known RBP	11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	RUNDC1	Q96C34	613 aa		11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	RNF123	Q5XPI4	1314 aa		11.3	□□□□□ -0.6
C1orf61-209	ENST00000464238	IQCA1L	A6NCM1	817 aa		11.29	□□□□□ -0.6
C1orf61-209	ENST00000464238	CALD1	Q05682	793 aa	Known RBP	11.29	□□□□□ -0.6
C1orf61-209	ENST00000464238	THUMPD2	Q9BTF0	503 aa	Known RBP	11.29	□□□□□ -0.6
C1orf61-209	ENST00000464238	CHMP4A	Q9BY43	222 aa		11.29	□□□□□ -0.6
C1orf61-209	ENST00000464238	EIF2S2	P20042	333 aa	Known RBP	11.28	□□□□□ -0.6
C1orf61-209	ENST00000464238	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
C1orf61-209	ENST00000464238	HLF	Q16534	295 aa		11.28	□□□□□ -0.6
C1orf61-209	ENST00000464238	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.28	□□□□□ -0.6
C1orf61-209	ENST00000464238	RBM17	Q96I25	401 aa	Known RBP	11.28	□□□□□ -0.6
C1orf61-209	ENST00000464238	ZBTB3	Q9H5J0	574 aa		11.28	□□□□□ -0.6
C1orf61-209	ENST00000464238	HOXB7	P09629	217 aa		11.27	□□□□□ -0.61
C1orf61-209	ENST00000464238	NEUROD2	Q15784	382 aa		11.27	□□□□□ -0.61
C1orf61-209	ENST00000464238	JDP2	Q8WYK2	163 aa		11.27	□□□□□ -0.61
C1orf61-209	ENST00000464238	GPT	P24298	496 aa		11.26	□□□□□ -0.61
C1orf61-209	ENST00000464238	CRY2	Q49AN0	593 aa		11.26	□□□□□ -0.61
C1orf61-209	ENST00000464238	TTLL7	Q6ZT98	887 aa		11.26	□□□□□ -0.61
C1orf61-209	ENST00000464238	NLRP3	Q96P20	1036 aa		11.26	□□□□□ -0.61
C1orf61-209	ENST00000464238	ZEB1	P37275	1124 aa	Predicted RBP	11.25	□□□□□ -0.61
C1orf61-209	ENST00000464238	CCDC146	Q8IYE0	955 aa		11.25	□□□□□ -0.61
C1orf61-209	ENST00000464238	ZNF34	Q8IZ26	560 aa		11.25	□□□□□ -0.61
C1orf61-209	ENST00000464238	PSMD1	Q99460	953 aa		11.25	□□□□□ -0.61
C1orf61-209	ENST00000464238	UTP14A	Q9BVJ6	771 aa	Known RBP	11.25	□□□□□ -0.61
C1orf61-209	ENST00000464238	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.25	□□□□□ -0.61
C1orf61-209	ENST00000464238	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
C1orf61-209	ENST00000464238	LAS1L	Q9Y4W2	734 aa	Known RBP	11.25	□□□□□ -0.61
C1orf61-209	ENST00000464238	HSP90B1	P14625	803 aa	Known RBP	11.24	□□□□□ -0.61
C1orf61-209	ENST00000464238	HOXA10	P31260	410 aa	Predicted RBP	11.24	□□□□□ -0.61
C1orf61-209	ENST00000464238	IARS	P41252	1262 aa	Known RBP	11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms