RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 TPSG1Q9NRR2 321 aa9.16□□□□□ -0.94
CD46-211ENST00000464082 ZNF330Q9Y3S2 320 aaPredicted RBP9.16□□□□□ -0.94
CD46-211ENST00000464082 ATXN7O15265 892 aaPredicted RBP9.15□□□□□ -0.94
CD46-211ENST00000464082 SPATA31C1P0DKV0 1188 aa9.15□□□□□ -0.94
CD46-211ENST00000464082 PCBP4P57723 403 aaKnown RBP9.15□□□□□ -0.94
CD46-211ENST00000464082 TNP2Q05952 138 aa9.15□□□□□ -0.94
CD46-211ENST00000464082 TLR1Q15399 786 aa9.15□□□□□ -0.94
CD46-211ENST00000464082 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.95
CD46-211ENST00000464082 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
CD46-211ENST00000464082 DISP1Q96F81 1524 aa9.14□□□□□ -0.95
CD46-211ENST00000464082 NLRP8Q86W28 1048 aa9.13□□□□□ -0.95
CD46-211ENST00000464082 AIDAQ96BJ3 306 aa9.13□□□□□ -0.95
CD46-211ENST00000464082 PCMTD1Q96MG8 357 aaPredicted RBP9.13□□□□□ -0.95
CD46-211ENST00000464082 UGGT2Q9NYU1 1516 aa9.13□□□□□ -0.95
CD46-211ENST00000464082 PRXQ9BXM0 1461 aa9.13□□□□□ -0.95
CD46-211ENST00000464082 KHNYNO15037 678 aaKnown RBP9.12□□□□□ -0.95
CD46-211ENST00000464082 FAM182BQ5T319 152 aa9.12□□□□□ -0.95
CD46-211ENST00000464082 KIAA0556O60303 1618 aa9.12□□□□□ -0.95
CD46-211ENST00000464082 A0A1W2PNR3 127 aa9.11□□□□□ -0.95
CD46-211ENST00000464082 DYRK3O43781 588 aa9.11□□□□□ -0.95
CD46-211ENST00000464082 ARTNQ5T4W7 220 aa9.11□□□□□ -0.95
CD46-211ENST00000464082 ZFP64Q9NPA5 681 aa9.11□□□□□ -0.95
CD46-211ENST00000464082 AVENQ9NQS1 362 aaPredicted RBP9.11□□□□□ -0.95
CD46-211ENST00000464082 MAPKBP1O60336 1514 aa9.1□□□□□ -0.95
CD46-211ENST00000464082 ZNF468Q5VIY5 522 aaPredicted RBP9.1□□□□□ -0.95
CD46-211ENST00000464082 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
CD46-211ENST00000464082 DIP2BQ9P265 1576 aa9.09□□□□□ -0.95
CD46-211ENST00000464082 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
CD46-211ENST00000464082 SCNN1DP51172 638 aa9.09□□□□□ -0.95
CD46-211ENST00000464082 STRN4Q9NRL3 753 aa9.09□□□□□ -0.95
CD46-211ENST00000464082 USP4Q13107 963 aa9.08□□□□□ -0.96
CD46-211ENST00000464082 ARSJQ5FYB0 599 aaPredicted RBP9.08□□□□□ -0.96
CD46-211ENST00000464082 MTMR14Q8NCE2 650 aa9.08□□□□□ -0.96
CD46-211ENST00000464082 C1orf216Q8TAB5 229 aa9.08□□□□□ -0.96
CD46-211ENST00000464082 PRR12Q9ULL5 1215 aa9.08□□□□□ -0.96
CD46-211ENST00000464082 PRSS36Q5K4E3 855 aa9.07□□□□□ -0.96
CD46-211ENST00000464082 PHTF2Q8N3S3 785 aa9.07□□□□□ -0.96
CD46-211ENST00000464082 NIFKQ9BYG3 293 aaKnown RBP9.07□□□□□ -0.96
CD46-211ENST00000464082 KRTAP9-9Q9BYP9 154 aa9.07□□□□□ -0.96
CD46-211ENST00000464082 KRTAP9-4Q9BYQ2 154 aa9.07□□□□□ -0.96
CD46-211ENST00000464082 DOLKQ9UPQ8 538 aa9.07□□□□□ -0.96
CD46-211ENST00000464082 TSPOAP1O95153 1857 aa9.06□□□□□ -0.96
CD46-211ENST00000464082 ZNF295-AS1Q8N0V1 137 aa9.06□□□□□ -0.96
CD46-211ENST00000464082 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
CD46-211ENST00000464082 TNIKQ9UKE5 1360 aa9.06□□□□□ -0.96
CD46-211ENST00000464082 PPRC1Q5VV67 1664 aaKnown RBP9.06□□□□□ -0.96
CD46-211ENST00000464082 UHRF1BP1LA0JNW5 1464 aa9.05□□□□□ -0.96
CD46-211ENST00000464082 ABCC10Q5T3U5 1492 aa9.05□□□□□ -0.96
CD46-211ENST00000464082 INHAP05111 366 aa9.05□□□□□ -0.96
CD46-211ENST00000464082 GDF10P55107 478 aa9.05□□□□□ -0.96
CD46-211ENST00000464082 COL9A3Q14050 684 aaPredicted RBP9.05□□□□□ -0.96
CD46-211ENST00000464082 ZIC5Q96T25 663 aa9.05□□□□□ -0.96
CD46-211ENST00000464082 ZCCHC11Q5TAX3 1644 aaKnown RBP9.05□□□□□ -0.96
CD46-211ENST00000464082 ABCC2Q92887 1545 aa9.05□□□□□ -0.96
CD46-211ENST00000464082 PTPRGP23470 1445 aa9.05□□□□□ -0.96
CD46-211ENST00000464082 CARMIL2Q6F5E8 1435 aa9.05□□□□□ -0.96
CD46-211ENST00000464082 SAMD9Q5K651 1589 aa9.04□□□□□ -0.96
CD46-211ENST00000464082 ELOA3CA0A087WX78 387 aaPredicted RBP9.04□□□□□ -0.96
CD46-211ENST00000464082 ELOA3DA6NLF2 546 aaPredicted RBP9.04□□□□□ -0.96
CD46-211ENST00000464082 FAM157BP0CG42 384 aa9.04□□□□□ -0.96
CD46-211ENST00000464082 ELOA3BQ3SY89 546 aa9.04□□□□□ -0.96
CD46-211ENST00000464082 OXLD1Q5BKU9 147 aa9.04□□□□□ -0.96
CD46-211ENST00000464082 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
CD46-211ENST00000464082 ELOA3Q8NG57 546 aa9.04□□□□□ -0.96
CD46-211ENST00000464082 MDFIQ99750 246 aa9.04□□□□□ -0.96
CD46-211ENST00000464082 KIF21BO75037 1637 aa9.03□□□□□ -0.96
CD46-211ENST00000464082 APBA3O96018 575 aa9.03□□□□□ -0.96
CD46-211ENST00000464082 SMTNP53814 917 aa9.03□□□□□ -0.96
CD46-211ENST00000464082 SYT9Q86SS6 491 aa9.03□□□□□ -0.96
CD46-211ENST00000464082 NBPF11Q86T75 865 aa9.03□□□□□ -0.96
CD46-211ENST00000464082 USP3Q9Y6I4 520 aa9.03□□□□□ -0.96
CD46-211ENST00000464082 ABCA8O94911 1581 aa9.03□□□□□ -0.96
CD46-211ENST00000464082 KDM5BQ9UGL1 1544 aa9.02□□□□□ -0.97
CD46-211ENST00000464082 SPDYE3A6NKU9 549 aa9.02□□□□□ -0.97
CD46-211ENST00000464082 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
CD46-211ENST00000464082 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.97
CD46-211ENST00000464082 SNRKQ9NRH2 765 aa9.02□□□□□ -0.97
CD46-211ENST00000464082 MARK1Q9P0L2 795 aa9.02□□□□□ -0.97
CD46-211ENST00000464082 EFSO43281 561 aa9.01□□□□□ -0.97
CD46-211ENST00000464082 ALAS2P22557 587 aa9.01□□□□□ -0.97
CD46-211ENST00000464082 EEA1Q15075 1411 aa9.01□□□□□ -0.97
CD46-211ENST00000464082 GRIK4Q16099 956 aa9.01□□□□□ -0.97
CD46-211ENST00000464082 NBPF1Q3BBV0 1214 aa9.01□□□□□ -0.97
CD46-211ENST00000464082 UACAQ9BZF9 1416 aa9.01□□□□□ -0.97
CD46-211ENST00000464082 SERTAD1Q9UHV2 236 aa9.01□□□□□ -0.97
CD46-211ENST00000464082 IQSEC3Q9UPP2 1182 aaPredicted RBP9.01□□□□□ -0.97
CD46-211ENST00000464082 M0R082 166 aa9□□□□□ -0.97
CD46-211ENST00000464082 ZNF417Q8TAU3 575 aa9□□□□□ -0.97
CD46-211ENST00000464082 ZNF587Q96SQ5 575 aaPredicted RBP9□□□□□ -0.97
CD46-211ENST00000464082 STARD13Q9Y3M8 1113 aa9□□□□□ -0.97
CD46-211ENST00000464082 PLB1Q6P1J6 1458 aa9□□□□□ -0.97
CD46-211ENST00000464082 GLI2P10070 1586 aa8.99□□□□□ -0.97
CD46-211ENST00000464082 MAP3K4Q9Y6R4 1608 aa8.99□□□□□ -0.97
CD46-211ENST00000464082 TATP17735 454 aaPredicted RBP8.99□□□□□ -0.97
CD46-211ENST00000464082 SLFNL1Q499Z3 407 aa8.99□□□□□ -0.97
CD46-211ENST00000464082 BANK1Q8NDB2 785 aa8.99□□□□□ -0.97
CD46-211ENST00000464082 CHIC2Q9UKJ5 165 aa8.99□□□□□ -0.97
CD46-211ENST00000464082 PARP3Q9Y6F1 533 aa8.99□□□□□ -0.97
CD46-211ENST00000464082 GJA3Q9Y6H8 435 aa8.99□□□□□ -0.97
CD46-211ENST00000464082 GOLGA3Q08378 1498 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms