RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
XRN1-203ENST00000463916 ANXA1P04083 346 aa16.94■□□□□ 0.3
XRN1-203ENST00000463916 MBIPQ9NS73 344 aa16.94■□□□□ 0.3
XRN1-203ENST00000463916 PIM2Q9P1W9 311 aa16.94■□□□□ 0.3
XRN1-203ENST00000463916 ZNF784Q8NCA9 323 aaPredicted RBP16.93■□□□□ 0.3
XRN1-203ENST00000463916 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
XRN1-203ENST00000463916 ANKRD31Q8N7Z5 1873 aa16.92■□□□□ 0.3
XRN1-203ENST00000463916 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
XRN1-203ENST00000463916 NIP7Q9Y221 180 aaKnown RBP eCLIP16.92■□□□□ 0.3
XRN1-203ENST00000463916 MAP3K15Q6ZN16 1313 aa16.91■□□□□ 0.3
XRN1-203ENST00000463916 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
XRN1-203ENST00000463916 ZBTB3Q9H5J0 574 aa16.91■□□□□ 0.3
XRN1-203ENST00000463916 ERVV-1B6SEH8 477 aa16.9■□□□□ 0.3
XRN1-203ENST00000463916 RGL2O15211 777 aa16.9■□□□□ 0.3
XRN1-203ENST00000463916 C2CD5Q86YS7 1000 aa16.9■□□□□ 0.3
XRN1-203ENST00000463916 CNBD1Q8NA66 436 aa16.9■□□□□ 0.3
XRN1-203ENST00000463916 BRIP1Q9BX63 1249 aa16.9■□□□□ 0.3
XRN1-203ENST00000463916 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
XRN1-203ENST00000463916 NBPF5PQ86XG9 351 aaPredicted RBP16.9■□□□□ 0.3
XRN1-203ENST00000463916 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
XRN1-203ENST00000463916 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.29
XRN1-203ENST00000463916 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
XRN1-203ENST00000463916 NUP98P52948 1817 aa16.89■□□□□ 0.29
XRN1-203ENST00000463916 H0YIN7 160 aa16.89■□□□□ 0.29
XRN1-203ENST00000463916 GNAI1P63096 354 aa16.89■□□□□ 0.29
XRN1-203ENST00000463916 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
XRN1-203ENST00000463916 WWC1Q8IX03 1113 aa16.89■□□□□ 0.29
XRN1-203ENST00000463916 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
XRN1-203ENST00000463916 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
XRN1-203ENST00000463916 ARFGEF1Q9Y6D6 1849 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
XRN1-203ENST00000463916 NPHP1O15259 732 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 PDE6BP35913 854 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 CCDC27Q2M243 656 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 HDGFL1Q5TGJ6 251 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 COPS6Q7L5N1 327 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 DDX21Q9NR30 783 aaKnown RBP eCLIP16.87■□□□□ 0.29
XRN1-203ENST00000463916 DLEC1Q9Y238 1755 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 UBN2Q6ZU65 1347 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 GPTP24298 496 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 AIMP1Q12904 312 aaKnown RBP16.87■□□□□ 0.29
XRN1-203ENST00000463916 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 XAGE3Q8WTP9 111 aa16.87■□□□□ 0.29
XRN1-203ENST00000463916 SALL2Q9Y467 1007 aaPredicted RBP16.87■□□□□ 0.29
XRN1-203ENST00000463916 COL11A2P13942 1736 aaPredicted RBP16.86■□□□□ 0.29
XRN1-203ENST00000463916 HOXB7P09629 217 aa16.86■□□□□ 0.29
XRN1-203ENST00000463916 ST5P78524 1137 aa16.86■□□□□ 0.29
XRN1-203ENST00000463916 TPTE2Q6XPS3 522 aa16.86■□□□□ 0.29
XRN1-203ENST00000463916 GIGYF2Q6Y7W6 1299 aaKnown RBP16.86■□□□□ 0.29
XRN1-203ENST00000463916 TTLL6Q8N841 843 aa16.86■□□□□ 0.29
XRN1-203ENST00000463916 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
XRN1-203ENST00000463916 ZNF34Q8IZ26 560 aa16.85■□□□□ 0.29
XRN1-203ENST00000463916 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
XRN1-203ENST00000463916 ZNF622Q969S3 477 aaKnown RBP eCLIP16.85■□□□□ 0.292e-7■■□□□ 14.3
XRN1-203ENST00000463916 ADCY9O60503 1353 aa16.84■□□□□ 0.29
XRN1-203ENST00000463916 SRGNP10124 158 aa16.84■□□□□ 0.29
XRN1-203ENST00000463916 SUSD4Q5VX71 490 aa16.84■□□□□ 0.29
XRN1-203ENST00000463916 NUTM1Q86Y26 1132 aa16.84■□□□□ 0.29
XRN1-203ENST00000463916 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
XRN1-203ENST00000463916 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.28
XRN1-203ENST00000463916 KLRG2A4D1S0 409 aaPredicted RBP16.82■□□□□ 0.28
XRN1-203ENST00000463916 ERFEQ4G0M1 354 aa16.82■□□□□ 0.28
XRN1-203ENST00000463916 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
XRN1-203ENST00000463916 PDZRN3Q9UPQ7 1066 aa16.82■□□□□ 0.28
XRN1-203ENST00000463916 ABCC12Q96J65 1359 aa16.82■□□□□ 0.28
XRN1-203ENST00000463916 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
XRN1-203ENST00000463916 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
XRN1-203ENST00000463916 NTSR2O95665 410 aa16.81■□□□□ 0.28
XRN1-203ENST00000463916 PRELPP51888 382 aa16.81■□□□□ 0.28
XRN1-203ENST00000463916 STYK1Q6J9G0 422 aa16.81■□□□□ 0.28
XRN1-203ENST00000463916 MASTLQ96GX5 879 aa16.81■□□□□ 0.28
XRN1-203ENST00000463916 C21orf2O43822 256 aa16.8■□□□□ 0.28
XRN1-203ENST00000463916 RASSF7Q02833 373 aa16.8■□□□□ 0.28
XRN1-203ENST00000463916 ZNF526Q8TF50 670 aaPredicted RBP16.8■□□□□ 0.28
XRN1-203ENST00000463916 ZNF428Q96B54 188 aa16.8■□□□□ 0.28
XRN1-203ENST00000463916 NYXQ9GZU5 481 aa16.8■□□□□ 0.28
XRN1-203ENST00000463916 SLX4Q8IY92 1834 aa16.8■□□□□ 0.28
XRN1-203ENST00000463916 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
XRN1-203ENST00000463916 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
XRN1-203ENST00000463916 PRPF40BQ6NWY9 871 aaKnown RBP16.79■□□□□ 0.28
XRN1-203ENST00000463916 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
XRN1-203ENST00000463916 PHAXQ9H814 394 aaKnown RBP16.79■□□□□ 0.28
XRN1-203ENST00000463916 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
XRN1-203ENST00000463916 HYPKQ9NX55 129 aa16.79■□□□□ 0.28
XRN1-203ENST00000463916 IL16Q14005 1332 aa16.79■□□□□ 0.28
XRN1-203ENST00000463916 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
XRN1-203ENST00000463916 NFKBIEO00221 500 aa16.78■□□□□ 0.28
XRN1-203ENST00000463916 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
XRN1-203ENST00000463916 NLRP10Q86W26 655 aa16.78■□□□□ 0.28
XRN1-203ENST00000463916 SYNE4Q8N205 404 aa16.78■□□□□ 0.28
XRN1-203ENST00000463916 PLBD2Q8NHP8 589 aa16.78■□□□□ 0.28
XRN1-203ENST00000463916 CNKSR1Q969H4 720 aa16.78■□□□□ 0.28
XRN1-203ENST00000463916 NPR1P16066 1061 aa16.77■□□□□ 0.28
XRN1-203ENST00000463916 PARP10Q53GL7 1025 aa16.77■□□□□ 0.28
XRN1-203ENST00000463916 WDR63Q8IWG1 891 aa16.77■□□□□ 0.28
XRN1-203ENST00000463916 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.28
XRN1-203ENST00000463916 SBF1O95248 1867 aa16.77■□□□□ 0.28
XRN1-203ENST00000463916 CACNA1SQ13698 1873 aa16.77■□□□□ 0.28
XRN1-203ENST00000463916 TCERG1O14776 1098 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms