RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TNNT3P45378 269 aaPredicted RBP4.5□□□□□ -1.69
COL8A1-205ENST00000463753 TERF1P54274 439 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 ADGRD1Q6QNK2 874 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 PADI6Q6TGC4 694 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 PROSER2Q86WR7 435 aaPredicted RBP4.5□□□□□ -1.69
COL8A1-205ENST00000463753 ZNF526Q8TF50 670 aaPredicted RBP4.5□□□□□ -1.69
COL8A1-205ENST00000463753 RNF123Q5XPI4 1314 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 KIAA1551Q9HCM1 1747 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 PTMSP20962 102 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 C8orf34Q49A92 452 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 PANK3Q9H999 370 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 MYO5BQ9ULV0 1848 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 ARHGEF10O15013 1369 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 NUTM2FA1L443 756 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 IRF6O14896 467 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 KRT27Q7Z3Y8 459 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 GAS2L3Q86XJ1 694 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 CLTCL1P53675 1640 aa4.49□□□□□ -1.69
COL8A1-205ENST00000463753 PHRF1Q9P1Y6 1649 aaKnown RBP4.49□□□□□ -1.69
COL8A1-205ENST00000463753 ERICH4A6NGS2 130 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 NASPP49321 788 aaPredicted RBP4.48□□□□□ -1.69
COL8A1-205ENST00000463753 CCDC173Q0VFZ6 552 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 AMHR2Q16671 573 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 SASS6Q6UVJ0 657 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 FAM196AQ6ZSG2 479 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 MPNDQ8N594 471 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 ZNF622Q969S3 477 aaKnown RBP eCLIP4.48□□□□□ -1.69
COL8A1-205ENST00000463753 TMX1Q9H3N1 280 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 PRKRIP1Q9H875 184 aaPredicted RBP4.48□□□□□ -1.69
COL8A1-205ENST00000463753 ITSN1Q15811 1721 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 OATP04181 439 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 MMP14P50281 582 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 PACS2Q86VP3 889 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 LY75O60449 1722 aa4.48□□□□□ -1.69
COL8A1-205ENST00000463753 RAB3GAP2Q9H2M9 1393 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.47□□□□□ -1.69
COL8A1-205ENST00000463753 NBPF26B4DH59 902 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 TNNT1P13805 278 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 FECHP22830 423 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 RALBP1Q15311 655 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 BANK1Q8NDB2 785 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 PXYLP1Q8TE99 480 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 CRBNQ96SW2 442 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 RCAN3Q9UKA8 241 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 CCDC9Q9Y3X0 531 aaKnown RBP4.47□□□□□ -1.69
COL8A1-205ENST00000463753 ANKARQ7Z5J8 1434 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 ANKRD30BQ9BXX2 1392 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 ATF3P18847 181 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 AXDND1Q5T1B0 1012 aaPredicted RBP4.47□□□□□ -1.69
COL8A1-205ENST00000463753 PRPF38BQ5VTL8 546 aaKnown RBP4.47□□□□□ -1.69
COL8A1-205ENST00000463753 TATDN2Q93075 761 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 TIGD1Q96MW7 591 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.47□□□□□ -1.69
COL8A1-205ENST00000463753 OVOS2A0A0G2JMS6 1433 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 USP19O94966 1318 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 C3orf80F5H4A9 247 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 U2AF2P26368 475 aaKnown RBP eCLIP4.47□□□□□ -1.69
COL8A1-205ENST00000463753 LMOD3Q0VAK6 560 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 NBPF1Q3BBV0 1214 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 WWC3Q9ULE0 1092 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 AXIN2Q9Y2T1 843 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 LRRC37A3O60309 1634 aa4.47□□□□□ -1.69
COL8A1-205ENST00000463753 TONSLQ96HA7 1378 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 CAPN2P17655 700 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 PROX2Q3B8N5 592 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 GPATCH11Q8N954 259 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 SIRT1Q96EB6 747 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 AK7Q96M32 723 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 KIAA1468Q9P260 1216 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 THRAP3Q9Y2W1 955 aaKnown RBP4.46□□□□□ -1.7
COL8A1-205ENST00000463753 SSH2Q76I76 1423 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 CCDC66A2RUB6 948 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 CSPP1Q1MSJ5 1256 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 C20orf194Q5TEA3 1177 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 METTL3Q86U44 580 aaKnown RBP4.46□□□□□ -1.7
COL8A1-205ENST00000463753 PDCL2Q8N4E4 241 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 AFAP1Q8N556 730 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 MTFR1LQ9H019 292 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 ANTXR1Q9H6X2 564 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 UPF2Q9HAU5 1272 aaKnown RBP4.46□□□□□ -1.7
COL8A1-205ENST00000463753 BRCA1P38398 1863 aaKnown RBP4.46□□□□□ -1.7
COL8A1-205ENST00000463753 RIMS2Q9UQ26 1411 aa4.46□□□□□ -1.7
COL8A1-205ENST00000463753 INSRP06213 1382 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 KTN1Q86UP2 1357 aaKnown RBP4.45□□□□□ -1.7
COL8A1-205ENST00000463753 FAM208AQ9UK61 1670 aaKnown RBP4.45□□□□□ -1.7
COL8A1-205ENST00000463753 MLLT1Q03111 559 aaPredicted RBP4.45□□□□□ -1.7
COL8A1-205ENST00000463753 SLC20A2Q08357 652 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 OS9Q13438 667 aaPredicted RBP4.45□□□□□ -1.7
COL8A1-205ENST00000463753 FAM98CQ17RN3 349 aaKnown RBP4.45□□□□□ -1.7
COL8A1-205ENST00000463753 TXNDC2Q86VQ3 553 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 ZNF592Q92610 1267 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 NSD3Q9BZ95 1437 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 NPHP3Q7Z494 1330 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 TOMM70O94826 608 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 HSPA5P11021 654 aaKnown RBP4.45□□□□□ -1.7
COL8A1-205ENST00000463753 CCDC102AQ96A19 550 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 TOMM22Q9NS69 142 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 GEMIN8Q9NWZ8 242 aaKnown RBP4.45□□□□□ -1.7
COL8A1-205ENST00000463753 STK26Q9P289 416 aa4.45□□□□□ -1.7
COL8A1-205ENST00000463753 KIF3AQ9Y496 699 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms