RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-205ENST00000463741 BTBD11A6QL63 1104 aa20.26■□□□□ 0.83
SREBF2-205ENST00000463741 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
SREBF2-205ENST00000463741 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
SREBF2-205ENST00000463741 LTBP3Q9NS15 1303 aa20.26■□□□□ 0.83
SREBF2-205ENST00000463741 KCNQ3O43525 872 aa20.25■□□□□ 0.83
SREBF2-205ENST00000463741 PRKAR2BP31323 418 aa20.25■□□□□ 0.83
SREBF2-205ENST00000463741 PIP4K2AP48426 406 aaPredicted RBP20.25■□□□□ 0.83
SREBF2-205ENST00000463741 CNKSR1Q969H4 720 aa20.25■□□□□ 0.83
SREBF2-205ENST00000463741 STYK1Q6J9G0 422 aa20.24■□□□□ 0.83
SREBF2-205ENST00000463741 SRGNP10124 158 aa20.23■□□□□ 0.83
SREBF2-205ENST00000463741 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
SREBF2-205ENST00000463741 DDNO94850 711 aaPredicted RBP20.22■□□□□ 0.83
SREBF2-205ENST00000463741 POTEIP0CG38 1075 aa20.22■□□□□ 0.83
SREBF2-205ENST00000463741 POTEJP0CG39 1038 aa20.22■□□□□ 0.83
SREBF2-205ENST00000463741 SOGA3Q5TF21 947 aa20.22■□□□□ 0.83
SREBF2-205ENST00000463741 MASTLQ96GX5 879 aa20.22■□□□□ 0.83
SREBF2-205ENST00000463741 RSPH6AQ9H0K4 717 aa20.22■□□□□ 0.83
SREBF2-205ENST00000463741 PRAMEF22A3QJZ6 481 aa20.21■□□□□ 0.83
SREBF2-205ENST00000463741 CHADLQ6NUI6 762 aa20.21■□□□□ 0.83
SREBF2-205ENST00000463741 NBPF5PQ86XG9 351 aaPredicted RBP20.21■□□□□ 0.83
SREBF2-205ENST00000463741 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
SREBF2-205ENST00000463741 USP16Q9Y5T5 823 aa20.21■□□□□ 0.83
SREBF2-205ENST00000463741 ZNF652Q9Y2D9 606 aa20.2■□□□□ 0.82
SREBF2-205ENST00000463741 CREBZFQ9NS37 354 aa20.19■□□□□ 0.82
SREBF2-205ENST00000463741 MKRN1Q9UHC7 482 aaKnown RBP20.19■□□□□ 0.82
SREBF2-205ENST00000463741 CCDC93Q567U6 631 aa20.18■□□□□ 0.82
SREBF2-205ENST00000463741 MCM10Q7L590 875 aa20.18■□□□□ 0.82
SREBF2-205ENST00000463741 RTF1Q92541 710 aaKnown RBP20.18■□□□□ 0.82
SREBF2-205ENST00000463741 IQCA1LA6NCM1 817 aa20.17■□□□□ 0.82
SREBF2-205ENST00000463741 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
SREBF2-205ENST00000463741 CLEC4GQ6UXB4 293 aa20.17■□□□□ 0.82
SREBF2-205ENST00000463741 NPR1P16066 1061 aa20.16■□□□□ 0.82
SREBF2-205ENST00000463741 NUDCQ9Y266 331 aa20.16■□□□□ 0.82
SREBF2-205ENST00000463741 SCN4AP35499 1836 aa20.16■□□□□ 0.82
SREBF2-205ENST00000463741 FAM177BA6PVY3 158 aa20.15■□□□□ 0.82
SREBF2-205ENST00000463741 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
SREBF2-205ENST00000463741 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
SREBF2-205ENST00000463741 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
SREBF2-205ENST00000463741 LAMB4A4D0S4 1761 aa20.14■□□□□ 0.81
SREBF2-205ENST00000463741 DCTN1Q14203 1278 aa20.14■□□□□ 0.81
SREBF2-205ENST00000463741 LDHDQ86WU2 507 aa20.14■□□□□ 0.81
SREBF2-205ENST00000463741 C7orf43Q8WVR3 580 aa20.14■□□□□ 0.81
SREBF2-205ENST00000463741 ZNF277Q9NRM2 450 aaPredicted RBP20.14■□□□□ 0.81
SREBF2-205ENST00000463741 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
SREBF2-205ENST00000463741 NBPF26B4DH59 902 aa20.13■□□□□ 0.81
SREBF2-205ENST00000463741 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
SREBF2-205ENST00000463741 EAPPQ56P03 285 aaPredicted RBP20.13■□□□□ 0.81
SREBF2-205ENST00000463741 NBPF10Q6P3W6 841 aaKnown RBP20.13■□□□□ 0.81
SREBF2-205ENST00000463741 OLFM4Q6UX06 510 aa20.13■□□□□ 0.81
SREBF2-205ENST00000463741 TPTE2Q6XPS3 522 aa20.13■□□□□ 0.81
SREBF2-205ENST00000463741 NBPF15Q8N660 670 aa20.13■□□□□ 0.81
SREBF2-205ENST00000463741 L3MBTL3Q96JM7 780 aaPredicted RBP20.13■□□□□ 0.81
SREBF2-205ENST00000463741 TAF1DQ9H5J8 278 aaPredicted RBP20.13■□□□□ 0.81
SREBF2-205ENST00000463741 CNTNAP1P78357 1384 aa20.11■□□□□ 0.81
SREBF2-205ENST00000463741 PASKQ96RG2 1323 aa20.11■□□□□ 0.81
SREBF2-205ENST00000463741 KLRG2A4D1S0 409 aaPredicted RBP20.1■□□□□ 0.81
SREBF2-205ENST00000463741 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
SREBF2-205ENST00000463741 RGL2O15211 777 aa20.09■□□□□ 0.81
SREBF2-205ENST00000463741 PPP2R1AP30153 589 aa20.09■□□□□ 0.81
SREBF2-205ENST00000463741 HLFQ16534 295 aa20.09■□□□□ 0.81
SREBF2-205ENST00000463741 RTKN2Q8IZC4 609 aa20.09■□□□□ 0.81
SREBF2-205ENST00000463741 HACL1Q9UJ83 578 aa20.09■□□□□ 0.81
SREBF2-205ENST00000463741 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
SREBF2-205ENST00000463741 ADAMTSL1Q8N6G6 1762 aa20.08■□□□□ 0.81
SREBF2-205ENST00000463741 RNF123Q5XPI4 1314 aa20.08■□□□□ 0.81
SREBF2-205ENST00000463741 ABCC12Q96J65 1359 aa20.08■□□□□ 0.8
SREBF2-205ENST00000463741 FOXN1O15353 648 aa20.07■□□□□ 0.8
SREBF2-205ENST00000463741 EPHX2P34913 555 aa20.07■□□□□ 0.8
SREBF2-205ENST00000463741 IARSP41252 1262 aaKnown RBP20.07■□□□□ 0.8
SREBF2-205ENST00000463741 MIS18AQ9NYP9 233 aa20.07■□□□□ 0.8
SREBF2-205ENST00000463741 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
SREBF2-205ENST00000463741 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
SREBF2-205ENST00000463741 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
SREBF2-205ENST00000463741 ALDH1B1P30837 517 aa20.06■□□□□ 0.8
SREBF2-205ENST00000463741 TAF7Q15545 349 aaPredicted RBP20.06■□□□□ 0.8
SREBF2-205ENST00000463741 NGEFQ8N5V2 710 aa20.06■□□□□ 0.8
SREBF2-205ENST00000463741 NUTM1Q86Y26 1132 aa20.05■□□□□ 0.8
SREBF2-205ENST00000463741 SYNE4Q8N205 404 aa20.05■□□□□ 0.8
SREBF2-205ENST00000463741 SNED1Q8TER0 1413 aa20.04■□□□□ 0.8
SREBF2-205ENST00000463741 ITGBL1O95965 494 aaPredicted RBP20.04■□□□□ 0.8
SREBF2-205ENST00000463741 VEGFBP49765 207 aa20.04■□□□□ 0.8
SREBF2-205ENST00000463741 AIDAQ96BJ3 306 aa20.04■□□□□ 0.8
SREBF2-205ENST00000463741 NYXQ9GZU5 481 aa20.04■□□□□ 0.8
SREBF2-205ENST00000463741 DLG5Q8TDM6 1919 aa20.04■□□□□ 0.8
SREBF2-205ENST00000463741 FZD9O00144 591 aa20.03■□□□□ 0.8
SREBF2-205ENST00000463741 MAP1SQ66K74 1059 aaPredicted RBP20.03■□□□□ 0.8
SREBF2-205ENST00000463741 PNMA8AQ86V59 439 aaPredicted RBP20.03■□□□□ 0.8
SREBF2-205ENST00000463741 JDP2Q8WYK2 163 aa20.03■□□□□ 0.8
SREBF2-205ENST00000463741 NUP98P52948 1817 aa20.03■□□□□ 0.8
SREBF2-205ENST00000463741 NEFMP07197 916 aa20.02■□□□□ 0.8
SREBF2-205ENST00000463741 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
SREBF2-205ENST00000463741 KIF6Q6ZMV9 814 aa20.02■□□□□ 0.8
SREBF2-205ENST00000463741 GPC2Q8N158 579 aa20.02■□□□□ 0.8
SREBF2-205ENST00000463741 PSMD1Q99460 953 aa20.02■□□□□ 0.8
SREBF2-205ENST00000463741 COL4A5P29400 1685 aa20.02■□□□□ 0.8
SREBF2-205ENST00000463741 CNTROBQ8N137 903 aa20.01■□□□□ 0.79
SREBF2-205ENST00000463741 RPGRQ92834 1020 aaKnown RBP20.01■□□□□ 0.79
SREBF2-205ENST00000463741 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
SREBF2-205ENST00000463741 GJA3Q9Y6H8 435 aa20.01■□□□□ 0.79
SREBF2-205ENST00000463741 MAP3K15Q6ZN16 1313 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms