RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ASAP1Q9ULH1 1129 aa15.78■□□□□ 0.12
VAPB-203ENST00000463370 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
VAPB-203ENST00000463370 KIF1BPQ96EK5 621 aa15.78■□□□□ 0.12
VAPB-203ENST00000463370 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.78■□□□□ 0.12
VAPB-203ENST00000463370 PIP4K2BP78356 416 aa15.77■□□□□ 0.12
VAPB-203ENST00000463370 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
VAPB-203ENST00000463370 COL22A1Q8NFW1 1626 aaPredicted RBP15.77■□□□□ 0.12
VAPB-203ENST00000463370 COL14A1Q05707 1796 aaKnown RBP15.77■□□□□ 0.11
VAPB-203ENST00000463370 PAPPAQ13219 1627 aa15.77■□□□□ 0.11
VAPB-203ENST00000463370 KLHDC4Q8TBB5 520 aa15.76■□□□□ 0.11
VAPB-203ENST00000463370 UBR2Q8IWV8 1755 aa15.76■□□□□ 0.11
VAPB-203ENST00000463370 CD2BP2O95400 341 aaKnown RBP15.76■□□□□ 0.11
VAPB-203ENST00000463370 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
VAPB-203ENST00000463370 USP26Q9BXU7 913 aa15.76■□□□□ 0.11
VAPB-203ENST00000463370 OS9Q13438 667 aaPredicted RBP15.75■□□□□ 0.11
VAPB-203ENST00000463370 PI4K2BQ8TCG2 481 aa15.75■□□□□ 0.11
VAPB-203ENST00000463370 ANTXR1Q9H6X2 564 aa15.75■□□□□ 0.11
VAPB-203ENST00000463370 MAP4K4O95819 1239 aaPredicted RBP15.75■□□□□ 0.11
VAPB-203ENST00000463370 RILPL2Q969X0 211 aa15.75■□□□□ 0.11
VAPB-203ENST00000463370 ATG3Q9NT62 314 aa15.75■□□□□ 0.11
VAPB-203ENST00000463370 LAMB4A4D0S4 1761 aa15.74■□□□□ 0.11
VAPB-203ENST00000463370 NUTM2BA6NNL0 878 aaPredicted RBP15.74■□□□□ 0.11
VAPB-203ENST00000463370 NUTM2EB1AL46 878 aaPredicted RBP15.74■□□□□ 0.11
VAPB-203ENST00000463370 TRIM6-TRIM34B2RNG4 842 aa15.74■□□□□ 0.11
VAPB-203ENST00000463370 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
VAPB-203ENST00000463370 NUTM2AQ8IVF1 878 aaPredicted RBP15.74■□□□□ 0.11
VAPB-203ENST00000463370 ERBB4Q15303 1308 aa15.74■□□□□ 0.11
VAPB-203ENST00000463370 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
VAPB-203ENST00000463370 HSP90AB4PQ58FF6 505 aa15.73■□□□□ 0.11
VAPB-203ENST00000463370 DNAJC10Q8IXB1 793 aa15.73■□□□□ 0.11
VAPB-203ENST00000463370 SIL1Q9H173 461 aa15.73■□□□□ 0.11
VAPB-203ENST00000463370 ZBTB3Q9H5J0 574 aa15.73■□□□□ 0.11
VAPB-203ENST00000463370 SASH1O94885 1247 aa15.72■□□□□ 0.11
VAPB-203ENST00000463370 CASC1Q6TDU7 716 aa15.72■□□□□ 0.11
VAPB-203ENST00000463370 A0A087WZG4 1122 aa15.72■□□□□ 0.11
VAPB-203ENST00000463370 EXOC5O00471 708 aa15.72■□□□□ 0.11
VAPB-203ENST00000463370 CASP7P55210 303 aa15.72■□□□□ 0.11
VAPB-203ENST00000463370 SLC4A9Q96Q91 983 aa15.72■□□□□ 0.11
VAPB-203ENST00000463370 IL25Q9H293 177 aa15.72■□□□□ 0.11
VAPB-203ENST00000463370 HDAC5Q9UQL6 1122 aa15.72■□□□□ 0.11
VAPB-203ENST00000463370 AOX1Q06278 1338 aa15.71■□□□□ 0.11
VAPB-203ENST00000463370 CHMLP26374 656 aa15.71■□□□□ 0.11
VAPB-203ENST00000463370 RTL5Q5HYW3 569 aaPredicted RBP15.71■□□□□ 0.11
VAPB-203ENST00000463370 ERC2O15083 957 aa15.71■□□□□ 0.11
VAPB-203ENST00000463370 HSCBQ8IWL3 235 aa15.71■□□□□ 0.11
VAPB-203ENST00000463370 SYTL4Q96C24 671 aaPredicted RBP15.71■□□□□ 0.11
VAPB-203ENST00000463370 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
VAPB-203ENST00000463370 ARFGEF2Q9Y6D5 1785 aa15.71■□□□□ 0.1
VAPB-203ENST00000463370 PHLPP1O60346 1717 aa15.71■□□□□ 0.1
VAPB-203ENST00000463370 SNX21Q969T3 373 aa15.7■□□□□ 0.1
VAPB-203ENST00000463370 BCL9O00512 1426 aa15.7■□□□□ 0.1
VAPB-203ENST00000463370 TUBGCP6Q96RT7 1819 aa15.7■□□□□ 0.1
VAPB-203ENST00000463370 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
VAPB-203ENST00000463370 ESYT1Q9BSJ8 1104 aa15.7■□□□□ 0.1
VAPB-203ENST00000463370 RFX5P48382 616 aaPredicted RBP15.69■□□□□ 0.1
VAPB-203ENST00000463370 CLASRPQ8N2M8 674 aaKnown RBP15.69■□□□□ 0.1
VAPB-203ENST00000463370 EAF2Q96CJ1 260 aaPredicted RBP15.69■□□□□ 0.1
VAPB-203ENST00000463370 TLR7Q9NYK1 1049 aaKnown RBP15.69■□□□□ 0.1
VAPB-203ENST00000463370 FRAT2O75474 233 aaPredicted RBP15.69■□□□□ 0.1
VAPB-203ENST00000463370 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
VAPB-203ENST00000463370 AACSQ86V21 672 aa15.69■□□□□ 0.1
VAPB-203ENST00000463370 USP42Q9H9J4 1324 aaKnown RBP15.68■□□□□ 0.1
VAPB-203ENST00000463370 PRIM1P49642 420 aaKnown RBP15.68■□□□□ 0.1
VAPB-203ENST00000463370 G3BP1Q13283 466 aaKnown RBP eCLIP15.68■□□□□ 0.18e-6■■□□□ 11.5
VAPB-203ENST00000463370 PLCH1Q4KWH8 1693 aa15.68■□□□□ 0.1
VAPB-203ENST00000463370 REC8O95072 547 aa15.68■□□□□ 0.1
VAPB-203ENST00000463370 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
VAPB-203ENST00000463370 ERC1Q8IUD2 1116 aa15.68■□□□□ 0.1
VAPB-203ENST00000463370 CCDC8Q9H0W5 538 aaPredicted RBP15.68■□□□□ 0.1
VAPB-203ENST00000463370 H7C1W4 665 aa15.67■□□□□ 0.1
VAPB-203ENST00000463370 TOM1O60784 492 aa15.67■□□□□ 0.1
VAPB-203ENST00000463370 VSIG10Q8N0Z9 540 aa15.67■□□□□ 0.1
VAPB-203ENST00000463370 IFIT2P09913 472 aaKnown RBP15.67■□□□□ 0.1
VAPB-203ENST00000463370 FOXO4P98177 505 aa15.67■□□□□ 0.1
VAPB-203ENST00000463370 CWC25Q9NXE8 425 aaPredicted RBP15.67■□□□□ 0.1
VAPB-203ENST00000463370 LMBR1LQ6UX01 489 aa15.66■□□□□ 0.1
VAPB-203ENST00000463370 TTC41PQ6P2S7 1318 aa15.66■□□□□ 0.1
VAPB-203ENST00000463370 COL15A1P39059 1388 aa15.66■□□□□ 0.1
VAPB-203ENST00000463370 COPRSQ9NQ92 184 aa15.65■□□□□ 0.1
VAPB-203ENST00000463370 ECHDC1Q9NTX5 307 aa15.65■□□□□ 0.1
VAPB-203ENST00000463370 NUP188Q5SRE5 1749 aa15.65■□□□□ 0.1
VAPB-203ENST00000463370 NRAPQ86VF7 1730 aa15.65■□□□□ 0.1
VAPB-203ENST00000463370 DDB1Q16531 1140 aa15.65■□□□□ 0.1
VAPB-203ENST00000463370 MARCH10Q8NA82 808 aaPredicted RBP15.65■□□□□ 0.1
VAPB-203ENST00000463370 ACSBG1Q96GR2 724 aa15.65■□□□□ 0.1
VAPB-203ENST00000463370 EIF5BO60841 1220 aaKnown RBP15.64■□□□□ 0.09
VAPB-203ENST00000463370 GLRX3O76003 335 aaKnown RBP15.64■□□□□ 0.09
VAPB-203ENST00000463370 CYP19A1P11511 503 aaPredicted RBP15.64■□□□□ 0.09
VAPB-203ENST00000463370 ANO2Q9NQ90 1003 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 AFDNP55196 1824 aaKnown RBP15.64■□□□□ 0.09
VAPB-203ENST00000463370 SPATA31A5Q5VU36 1347 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 SPATA31A7Q8IWB4 1347 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 ITGB4P16144 1822 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 UBAP1LF5GYI3 381 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 STARD3NLO95772 234 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 ARXQ96QS3 562 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 PALD1Q9ULE6 856 aa15.64■□□□□ 0.09
VAPB-203ENST00000463370 CCDC9Q9Y3X0 531 aaKnown RBP15.64■□□□□ 0.09
VAPB-203ENST00000463370 A0A0G2JS52 829 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms