RNA–Protein interactions for RNA: ENST00000463077.5

COMMD2-201, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-201ENST00000463077 SRGNP10124 158 aa27.37■■□□□ 1.97
COMMD2-201ENST00000463077 TEFQ10587 303 aa27.37■■□□□ 1.97
COMMD2-201ENST00000463077 CNKSR1Q969H4 720 aa27.37■■□□□ 1.97
COMMD2-201ENST00000463077 TAOK3Q9H2K8 898 aa27.37■■□□□ 1.97
COMMD2-201ENST00000463077 A1BGP04217 495 aa27.36■■□□□ 1.97
COMMD2-201ENST00000463077 SETDB2Q96T68 719 aa27.36■■□□□ 1.97
COMMD2-201ENST00000463077 SIPA1L3O60292 1781 aaPredicted RBP27.35■■□□□ 1.97
COMMD2-201ENST00000463077 SLX4Q8IY92 1834 aa27.35■■□□□ 1.97
COMMD2-201ENST00000463077 DDNO94850 711 aaPredicted RBP27.35■■□□□ 1.97
COMMD2-201ENST00000463077 GAS2L2Q8NHY3 880 aa27.35■■□□□ 1.97
COMMD2-201ENST00000463077 POTEIP0CG38 1075 aa27.34■■□□□ 1.97
COMMD2-201ENST00000463077 POTEJP0CG39 1038 aa27.34■■□□□ 1.97
COMMD2-201ENST00000463077 CNBD1Q8NA66 436 aa27.34■■□□□ 1.97
COMMD2-201ENST00000463077 FMNL2Q96PY5 1086 aa27.34■■□□□ 1.97
COMMD2-201ENST00000463077 CEMIPQ8WUJ3 1361 aa27.34■■□□□ 1.97
COMMD2-201ENST00000463077 SOGA3Q5TF21 947 aa27.33■■□□□ 1.97
COMMD2-201ENST00000463077 PRPF40BQ6NWY9 871 aaKnown RBP27.33■■□□□ 1.97
COMMD2-201ENST00000463077 C7orf43Q8WVR3 580 aa27.33■■□□□ 1.97
COMMD2-201ENST00000463077 MASTLQ96GX5 879 aa27.33■■□□□ 1.97
COMMD2-201ENST00000463077 ZNF330Q9Y3S2 320 aaPredicted RBP27.33■■□□□ 1.97
COMMD2-201ENST00000463077 CCDC184Q52MB2 194 aa27.32■■□□□ 1.96
COMMD2-201ENST00000463077 PRKAR2BP31323 418 aa27.31■■□□□ 1.96
COMMD2-201ENST00000463077 L3MBTL3Q96JM7 780 aaPredicted RBP27.31■■□□□ 1.96
COMMD2-201ENST00000463077 ST5P78524 1137 aa27.3■■□□□ 1.96
COMMD2-201ENST00000463077 MKRN1Q9UHC7 482 aaKnown RBP27.3■■□□□ 1.96
COMMD2-201ENST00000463077 PASKQ96RG2 1323 aa27.3■■□□□ 1.96
COMMD2-201ENST00000463077 KCNQ3O43525 872 aa27.29■■□□□ 1.96
COMMD2-201ENST00000463077 CLEC4GQ6UXB4 293 aa27.29■■□□□ 1.96
COMMD2-201ENST00000463077 DZIP3Q86Y13 1208 aaKnown RBP27.29■■□□□ 1.96
COMMD2-201ENST00000463077 PHACTR3Q96KR7 559 aa27.29■■□□□ 1.96
COMMD2-201ENST00000463077 ARFGEF2Q9Y6D5 1785 aa27.29■■□□□ 1.96
COMMD2-201ENST00000463077 KLRG2A4D1S0 409 aaPredicted RBP27.28■■□□□ 1.96
COMMD2-201ENST00000463077 NPM2Q86SE8 214 aaKnown RBP27.28■■□□□ 1.96
COMMD2-201ENST00000463077 PLEKHF1Q96S99 279 aa27.28■■□□□ 1.96
COMMD2-201ENST00000463077 USP16Q9Y5T5 823 aa27.28■■□□□ 1.96
COMMD2-201ENST00000463077 CNTNAP1P78357 1384 aa27.27■■□□□ 1.96
COMMD2-201ENST00000463077 IQCA1LA6NCM1 817 aa27.27■■□□□ 1.96
COMMD2-201ENST00000463077 LDHDQ86WU2 507 aa27.27■■□□□ 1.96
COMMD2-201ENST00000463077 TAF1DQ9H5J8 278 aaPredicted RBP27.26■■□□□ 1.95
COMMD2-201ENST00000463077 BCORQ6W2J9 1755 aa27.26■■□□□ 1.95
COMMD2-201ENST00000463077 BTBD11A6QL63 1104 aa27.25■■□□□ 1.95
COMMD2-201ENST00000463077 NPHP1O15259 732 aa27.25■■□□□ 1.95
COMMD2-201ENST00000463077 SCN4AP35499 1836 aa27.25■■□□□ 1.95
COMMD2-201ENST00000463077 ITGBL1O95965 494 aaPredicted RBP27.24■■□□□ 1.95
COMMD2-201ENST00000463077 FOXN1O15353 648 aa27.23■■□□□ 1.95
COMMD2-201ENST00000463077 NPR1P16066 1061 aa27.23■■□□□ 1.95
COMMD2-201ENST00000463077 CCDC93Q567U6 631 aa27.23■■□□□ 1.95
COMMD2-201ENST00000463077 PNNQ9H307 717 aaKnown RBP27.23■■□□□ 1.95
COMMD2-201ENST00000463077 ADAMTS8Q9UP79 889 aa27.23■■□□□ 1.95
COMMD2-201ENST00000463077 CACNA1SQ13698 1873 aa27.23■■□□□ 1.95
COMMD2-201ENST00000463077 RGL2O15211 777 aa27.22■■□□□ 1.95
COMMD2-201ENST00000463077 NBPF5PQ86XG9 351 aaPredicted RBP27.22■■□□□ 1.95
COMMD2-201ENST00000463077 PRDM10Q9NQV6 1147 aa27.22■■□□□ 1.95
COMMD2-201ENST00000463077 FKBP4Q02790 459 aaKnown RBP eCLIP27.21■■□□□ 1.95
COMMD2-201ENST00000463077 WDR43Q15061 677 aaKnown RBP eCLIP27.21■■□□□ 1.95
COMMD2-201ENST00000463077 DIEXFQ68CQ4 756 aaKnown RBP27.21■■□□□ 1.95
COMMD2-201ENST00000463077 PRAMEF22A3QJZ6 481 aa27.2■■□□□ 1.94
COMMD2-201ENST00000463077 PIP4K2AP48426 406 aaPredicted RBP27.2■■□□□ 1.94
COMMD2-201ENST00000463077 PNISRQ8TF01 805 aaKnown RBP27.2■■□□□ 1.94
COMMD2-201ENST00000463077 MRS2Q9HD23 443 aa27.2■■□□□ 1.94
COMMD2-201ENST00000463077 TMEM88BA6NKF7 163 aa27.19■■□□□ 1.94
COMMD2-201ENST00000463077 ZNF652Q9Y2D9 606 aa27.19■■□□□ 1.94
COMMD2-201ENST00000463077 SNRPA1P09661 255 aaKnown RBP27.18■■□□□ 1.94
COMMD2-201ENST00000463077 VEGFBP49765 207 aa27.18■■□□□ 1.94
COMMD2-201ENST00000463077 TPTE2Q6XPS3 522 aa27.18■■□□□ 1.94
COMMD2-201ENST00000463077 ZNF541Q9H0D2 1346 aa27.17■■□□□ 1.94
COMMD2-201ENST00000463077 RTKN2Q8IZC4 609 aa27.17■■□□□ 1.94
COMMD2-201ENST00000463077 ZNF277Q9NRM2 450 aaPredicted RBP27.17■■□□□ 1.94
COMMD2-201ENST00000463077 NBPF26B4DH59 902 aa27.16■■□□□ 1.94
COMMD2-201ENST00000463077 NBPF10Q6P3W6 841 aaKnown RBP27.16■■□□□ 1.94
COMMD2-201ENST00000463077 NBPF15Q8N660 670 aa27.16■■□□□ 1.94
COMMD2-201ENST00000463077 HACL1Q9UJ83 578 aa27.16■■□□□ 1.94
COMMD2-201ENST00000463077 ADAMTSL1Q8N6G6 1762 aa27.15■■□□□ 1.94
COMMD2-201ENST00000463077 FZD9O00144 591 aa27.15■■□□□ 1.94
COMMD2-201ENST00000463077 OLFM4Q6UX06 510 aa27.15■■□□□ 1.94
COMMD2-201ENST00000463077 WBP1LQ9NX94 342 aa27.15■■□□□ 1.94
COMMD2-201ENST00000463077 CTCFP49711 727 aaPredicted RBP27.14■■□□□ 1.94
COMMD2-201ENST00000463077 NIP7Q9Y221 180 aaKnown RBP eCLIP27.14■■□□□ 1.94
COMMD2-201ENST00000463077 NEFMP07197 916 aa27.13■■□□□ 1.93
COMMD2-201ENST00000463077 EPHX2P34913 555 aa27.13■■□□□ 1.93
COMMD2-201ENST00000463077 RUNDC1Q96C34 613 aa27.13■■□□□ 1.93
COMMD2-201ENST00000463077 ALDH1B1P30837 517 aa27.12■■□□□ 1.93
COMMD2-201ENST00000463077 NFE2L2Q16236 605 aa27.12■■□□□ 1.93
COMMD2-201ENST00000463077 EAPPQ56P03 285 aaPredicted RBP27.12■■□□□ 1.93
COMMD2-201ENST00000463077 PNMA8AQ86V59 439 aaPredicted RBP27.12■■□□□ 1.93
COMMD2-201ENST00000463077 SNED1Q8TER0 1413 aa27.12■■□□□ 1.93
COMMD2-201ENST00000463077 RASSF10A6NK89 507 aa27.11■■□□□ 1.93
COMMD2-201ENST00000463077 HTATSF1O43719 755 aaKnown RBP27.11■■□□□ 1.93
COMMD2-201ENST00000463077 IARSP41252 1262 aaKnown RBP27.11■■□□□ 1.93
COMMD2-201ENST00000463077 SYNE4Q8N205 404 aa27.11■■□□□ 1.93
COMMD2-201ENST00000463077 MAPK8IP3Q9UPT6 1336 aa27.11■■□□□ 1.93
COMMD2-201ENST00000463077 MCM10Q7L590 875 aa27.1■■□□□ 1.93
COMMD2-201ENST00000463077 CCDC146Q8IYE0 955 aa27.1■■□□□ 1.93
COMMD2-201ENST00000463077 CNTROBQ8N137 903 aa27.1■■□□□ 1.93
COMMD2-201ENST00000463077 AIDAQ96BJ3 306 aa27.1■■□□□ 1.93
COMMD2-201ENST00000463077 CCER2I3L3R5 266 aa27.09■■□□□ 1.93
COMMD2-201ENST00000463077 HLFQ16534 295 aa27.09■■□□□ 1.93
COMMD2-201ENST00000463077 GPC2Q8N158 579 aa27.09■■□□□ 1.93
COMMD2-201ENST00000463077 PSMD1Q99460 953 aa27.09■■□□□ 1.93
COMMD2-201ENST00000463077 CLEC11AQ9Y240 323 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms